MGE detailed information
MGE type: Integrative_Conjugative_Elements MGE length: 72148 bp
Accession: NZ_CP026670 Location: 1192476..1264623 Organism: Streptococcus pneumoniae strain endophthalmitis isolate 335 Replicon: chromosome
Accession: NZ_CP026670 Location: 1192476..1264623 Organism: Streptococcus pneumoniae strain endophthalmitis isolate 335 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| C4N11_RS06275 () | 1187751..1189292 | - | 1542 | WP_000537363.1 | sodium:solute symporter | - |
| C4N11_RS06280 () | 1189320..1190237 | - | 918 | WP_000654135.1 | N-acetylneuraminate lyase | - |
| C4N11_RS06285 () | 1190262..1190951 | - | 690 | WP_000448316.1 | N-acetylmannosamine-6-phosphate 2-epimerase | - |
| C4N11_RS06290 () | 1191723..1192979 | + | 1257 | WP_000436478.1 | ISL3 family transposase | - |
| C4N11_RS06295 () | 1193090..1193701 | - | 612 | WP_001809909.1 | MurR/RpiR family transcriptional regulator | - |
| C4N11_RS12300 () | 1193690..1193860 | - | 171 | Protein_1179 | MurR/RpiR family transcriptional regulator | - |
| C4N11_RS06300 () | 1194026..1194634 | + | 609 | WP_001165928.1 | DUF624 domain-containing protein | - |
| C4N11_RS06310 () | 1196516..1196653 | - | 138 | WP_000807141.1 | hypothetical protein | - |
| C4N11_RS06315 () | 1196787..1198106 | - | 1320 | WP_000945302.1 | membrane protein | - |
| C4N11_RS06320 () | 1198109..1198849 | - | 741 | WP_000356590.1 | ABC transporter ATP-binding protein YxdL | VF |
| C4N11_RS06325 () | 1198864..1200471 | - | 1608 | WP_001108416.1 | ABC transporter ATP-binding protein/permease | - |
| C4N11_RS06330 () | 1200468..1202408 | - | 1941 | WP_001076599.1 | S9 family peptidase | - |
| C4N11_RS06335 () | 1202441..1205050 | - | 2610 | WP_000386151.1 | protein kinase/lanthionine synthetase C family protein | - |
| C4N11_RS06340 () | 1205229..1205366 | - | 138 | WP_000807141.1 | hypothetical protein | - |
| C4N11_RS06345 () | 1205568..1206155 | - | 588 | WP_000821287.1 | CPBP family intramembrane metalloprotease | - |
| C4N11_RS12195 () | 1206248..1206391 | - | 144 | WP_000840773.1 | hypothetical protein | - |
| C4N11_RS06350 () | 1206404..1206784 | - | 381 | WP_000566556.1 | arsenate reductase family protein | - |
| C4N11_RS06355 () | 1206777..1207100 | - | 324 | WP_001814249.1 | hypothetical protein | - |
| C4N11_RS06360 () | 1207114..1207362 | - | 249 | Protein_1193 | replication initiator protein A | - |
| C4N11_RS06365 () | 1207362..1207532 | - | 171 | WP_001168348.1 | hypothetical protein | - |
| C4N11_RS06370 () | 1207785..1208972 | - | 1188 | WP_000237019.1 | Tyrosine recombinase XerD ; Integrase | Integrase |
| C4N11_RS06375 () | 1208944..1209213 | - | 270 | WP_000450956.1 | DUF3173 family protein | - |
| C4N11_RS06380 () | 1209486..1209710 | - | 225 | WP_000919629.1 | helix-turn-helix domain-containing protein | - |
| C4N11_RS06385 () | 1209814..1211643 | - | 1830 | WP_000237138.1 | relaxase/mobilization nuclease domain-containing protein | - |
| C4N11_RS06390 () | 1211630..1211995 | - | 366 | WP_000401235.1 | plasmid mobilization relaxosome protein MobC | - |
| C4N11_RS06395 () | 1212000..1212356 | - | 357 | WP_000817505.1 | hypothetical protein | - |
| C4N11_RS06400 () | 1212740..1212994 | - | 255 | WP_000456893.1 | hypothetical protein | - |
| C4N11_RS06405 () | 1213060..1217064 | - | 4005 | WP_000209103.1 | UvrD-helicase domain-containing protein | - |
| C4N11_RS06410 () | 1217186..1217572 | - | 387 | WP_000276173.1 | hypothetical protein | - |
| C4N11_RS06415 () | 1217644..1218594 | - | 951 | WP_001814252.1 | WYL domain-containing protein | - |
| C4N11_RS06420 () | 1218679..1219797 | - | 1119 | WP_000116042.1 | hypothetical protein | - |
| C4N11_RS06425 () | 1220059..1221855 | - | 1797 | WP_000016854.1 | NTPase | - |
| C4N11_RS06430 () | 1222272..1222538 | - | 267 | WP_000394413.1 | hypothetical protein | - |
| C4N11_RS06435 () | 1222525..1223229 | - | 705 | WP_001039645.1 | HAD-IB family hydrolase | - |
| C4N11_RS06440 () | 1223282..1223848 | - | 567 | WP_000180153.1 | GTP pyrophosphokinase | VF |
| C4N11_RS06445 () | 1223941..1224165 | - | 225 | WP_000644601.1 | hypothetical protein | - |
| C4N11_RS06450 () | 1224254..1224871 | - | 618 | WP_000013903.1 | hypothetical protein | - |
| C4N11_RS06455 () | 1225193..1225915 | - | 723 | WP_001814253.1 | hypothetical protein | - |
| C4N11_RS06465 () | 1226244..1227167 | + | 924 | WP_000417606.1 | protein rep | - |
| C4N11_RS06475 () | 1227963..1228682 | - | 720 | Protein_1214 | Chloramphenicol acetyltransferase | ARG |
| C4N11_RS06480 () | 1228853..1229101 | - | 249 | WP_001814254.1 | hypothetical protein | - |
| C4N11_RS06485 () | 1229340..1230128 | - | 789 | WP_000214003.1 | hypothetical protein | - |
| C4N11_RS06490 () | 1230604..1231362 | - | 759 | WP_000512672.1 | zeta toxin family protein | Toxin Detail |
| C4N11_RS06495 () | 1231362..1231838 | - | 477 | WP_000579607.1 | helix-turn-helix domain-containing protein | Antitoxin Detail |
| C4N11_RS06500 () | 1231908..1232180 | - | 273 | WP_000494445.1 | hypothetical protein | - |
| C4N11_RS06505 () | 1232218..1232601 | - | 384 | WP_000159218.1 | hypothetical protein | - |
| C4N11_RS06510 () | 1232598..1232831 | - | 234 | WP_000152419.1 | hypothetical protein | - |
| C4N11_RS06515 () | 1232882..1233967 | - | 1086 | WP_000401892.1 | toprim domain-containing protein | - |
| C4N11_RS06520 () | 1233977..1234618 | - | 642 | WP_000933090.1 | hypothetical protein | - |
| C4N11_RS06525 () | 1234839..1236962 | - | 2124 | WP_000756060.1 | Lactococcin-G-processing and transport ATP-binding protein LagD | VF |
| C4N11_RS06530 () | 1236969..1240220 | - | 3252 | WP_001080431.1 | type 2 lantipeptide synthetase LanM family protein | - |
| C4N11_RS06535 () | 1240303..1240518 | - | 216 | WP_001286517.1 | plantaricin C family lantibiotic | - |
| C4N11_RS06540 () | 1240663..1241391 | - | 729 | WP_001814255.1 | ABC transporter permease | - |
| C4N11_RS06545 () | 1241392..1242132 | - | 741 | WP_000886368.1 | ABC transporter permease | - |
| C4N11_RS06550 () | 1242125..1243060 | - | 936 | WP_001245731.1 | putative ABC transporter ATP-binding protein NosF | VF |
| C4N11_RS12200 () | 1243238..1243411 | - | 174 | WP_000025229.1 | hypothetical protein | - |
| C4N11_RS06555 () | 1243602..1244462 | + | 861 | WP_000154111.1 | helix-turn-helix domain-containing protein | - |
| C4N11_RS06560 () | 1244545..1244835 | - | 291 | WP_000998897.1 | hypothetical protein | - |
| C4N11_RS06565 () | 1244849..1245133 | - | 285 | WP_000969642.1 | hypothetical protein | - |
| C4N11_RS06570 () | 1245208..1246179 | - | 972 | WP_000252428.1 | hypothetical protein | - |
| C4N11_RS06575 () | 1246260..1248071 | - | 1812 | WP_001245667.1 | group II intron reverse transcriptase/maturase | - |
| C4N11_RS06580 () | 1248635..1253932 | - | 5298 | WP_001814256.1 | DEAD/DEAH box helicase family protein | - |
| C4N11_RS06585 () | 1253980..1254390 | - | 411 | WP_000398567.1 | thrombospondin type 3 repeat-containing protein | - |
| C4N11_RS06590 () | 1254542..1255108 | - | 567 | WP_000013900.1 | hypothetical protein | - |
| C4N11_RS12205 () | 1255127..1255315 | + | 189 | WP_001860875.1 | hypothetical protein | - |
| C4N11_RS06600 () | 1255346..1258159 | - | 2814 | WP_000653448.1 | CHAP domain-containing protein | - |
| C4N11_RS06605 () | 1258171..1260528 | - | 2358 | WP_029645481.1 | ATPase AAA | - |
| C4N11_RS06610 () | 1260476..1260838 | - | 363 | WP_001097588.1 | PrgI family protein | - |
| C4N11_RS06615 () | 1260892..1261746 | - | 855 | WP_001054261.1 | conjugal transfer protein TrbL | - |
| C4N11_RS06620 () | 1261763..1262005 | - | 243 | WP_000627865.1 | hypothetical protein | - |
| C4N11_RS06625 () | 1262026..1263903 | - | 1878 | WP_001814258.1 | type IV secretory system conjugative DNA transfer family protein | - |
| C4N11_RS06630 () | 1263903..1264391 | - | 489 | WP_000093679.1 | hypothetical protein | - |
| C4N11_RS06635 () | 1264381..1264680 | - | 300 | WP_000869762.1 | hypothetical protein | - |
| C4N11_RS06640 () | 1264963..1265799 | - | 837 | WP_000492399.1 | nucleotidyl transferase AbiEii/AbiGii toxin family protein | - |
| C4N11_RS06645 () | 1265799..1266389 | - | 591 | WP_000227919.1 | type IV toxin-antitoxin system AbiEi family antitoxin domain-containing protein | - |
| C4N11_RS06655 () | 1266820..1267134 | + | 315 | WP_000420682.1 | YdcP family protein | - |
| C4N11_RS06660 () | 1267150..1267536 | + | 387 | WP_000985015.1 | YdcP family protein | - |
| C4N11_RS06665 () | 1267565..1268950 | + | 1386 | WP_000813488.1 | DNA translocase FtsK | - |
| C4N11_RS06670 () | 1268953..1269105 | + | 153 | WP_000879507.1 | hypothetical protein | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|