MGE detailed information
MGE type: Integrative_Conjugative_Elements MGE length: 144907 bp
Accession: NZ_CP026655 Location: 1014461..1159367 Organism: Aliarcobacter cryaerophilus strain G13RTA Replicon: chromosome
Accession: NZ_CP026655 Location: 1014461..1159367 Organism: Aliarcobacter cryaerophilus strain G13RTA Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| C3B42_RS05135 () | 1009749..1011248 | - | 1500 | WP_164469475.1 | PAS domain-containing protein | - |
| C3B42_RS05140 () | 1011245..1011859 | - | 615 | WP_066166264.1 | chemotaxis protein CheC | - |
| C3B42_RS05145 () | 1011870..1012235 | - | 366 | WP_164469476.1 | response regulator | - |
| C3B42_RS05150 () | 1012317..1013483 | + | 1167 | WP_164469477.1 | FAD-binding oxidoreductase | - |
| C3B42_RS05155 () | 1013480..1014067 | + | 588 | WP_164469478.1 | hypothetical protein | - |
| C3B42_RS05165 () | 1014270..1014545 | - | 276 | WP_066154492.1 | HU family DNA-binding protein | - |
| C3B42_RS05170 () | 1014644..1015222 | - | 579 | WP_066154497.1 | class II aldolase and adducin N-terminal domain-containing protein | - |
| C3B42_RS05175 () | 1015279..1016184 | + | 906 | WP_164469479.1 | 16S rRNA (cytosine(1402)-N(4))-methyltransferase RsmH | - |
| C3B42_RS05180 () | 1016177..1016440 | + | 264 | WP_066154503.1 | hypothetical protein | - |
| C3B42_RS05185 () | 1016442..1017731 | - | 1290 | WP_164469480.1 | SH3 domain-containing protein | - |
| C3B42_RS05190 () | 1017810..1018097 | + | 288 | WP_206442826.1 | hypothetical protein | - |
| C3B42_RS05195 () | 1018229..1018507 | - | 279 | WP_164469481.1 | c-type cytochrome | - |
| C3B42_RS05200 () | 1018584..1018874 | - | 291 | WP_066165775.1 | heavy-metal-associated domain-containing protein | - |
| C3B42_RS05205 () | 1018871..1019809 | - | 939 | WP_164469482.1 | malate dehydrogenase | - |
| C3B42_RS05210 () | 1019903..1022095 | - | 2193 | WP_164469483.1 | NADP-dependent isocitrate dehydrogenase | - |
| C3B42_RS05215 () | 1022214..1023338 | - | 1125 | WP_066404793.1 | endolytic transglycosylase MltG | - |
| C3B42_RS05220 () | 1023388..1026144 | + | 2757 | WP_164469484.1 | AsmA-like C-terminal domain-containing protein | - |
| C3B42_RS05225 () | 1026232..1028433 | + | 2202 | WP_164469485.1 | endonuclease MutS2 | - |
| C3B42_RS05230 () | 1028451..1029734 | - | 1284 | WP_206442835.1 | DUF21 domain-containing protein | - |
| C3B42_RS05235 () | 1029830..1032726 | - | 2897 | Protein_1023 | DUF748 domain-containing protein | - |
| C3B42_RS05240 () | 1032787..1033575 | - | 789 | WP_066346781.1 | ATP-binding cassette domain-containing protein | - |
| C3B42_RS05245 () | 1033722..1034702 | + | 981 | WP_164469486.1 | diaminopimelate dehydrogenase | - |
| C3B42_RS05250 () | 1034891..1035592 | + | 702 | WP_164469487.1 | MOSC domain-containing protein | - |
| C3B42_RS05255 () | 1035605..1036777 | + | 1173 | WP_164469488.1 | aspartate aminotransferase family protein | - |
| C3B42_RS05260 () | 1036786..1037388 | + | 603 | WP_164469489.1 | pyridoxamine 5'-phosphate oxidase family protein | - |
| C3B42_RS05265 () | 1037444..1038616 | - | 1173 | WP_164469490.1 | benzoate/H(+) symporter BenE family transporter | - |
| C3B42_RS05270 () | 1038723..1039751 | - | 1029 | WP_164469491.1 | hypothetical protein | - |
| C3B42_RS05275 () | 1039877..1041244 | - | 1368 | WP_164469492.1 | oxygen-independent coproporphyrinogen III oxidase | - |
| C3B42_RS05280 () | 1041245..1042174 | - | 930 | WP_164469493.1 | ornithine carbamoyltransferase | - |
| C3B42_RS05285 () | 1042314..1042997 | - | 684 | WP_051487488.1 | Transcriptional activator protein CzcR | VF |
| C3B42_RS05290 () | 1043163..1044887 | - | 1725 | WP_164469494.1 | histidine kinase | - |
| C3B42_RS05295 () | 1045502..1046485 | + | 984 | WP_164469495.1 | hypothetical protein | - |
| C3B42_RS05300 () | 1046495..1047166 | + | 672 | WP_164469496.1 | hypothetical protein | - |
| C3B42_RS05305 () | 1047176..1047811 | + | 636 | WP_164469497.1 | hypothetical protein | - |
| C3B42_RS05310 () | 1048188..1048277 | + | 90 | WP_164470160.1 | hypothetical protein | - |
| C3B42_RS05315 () | 1048738..1050855 | + | 2118 | WP_164469498.1 | ribonucleoside triphosphate reductase | - |
| C3B42_RS05320 () | 1050833..1050997 | + | 165 | WP_108723430.1 | hypothetical protein | - |
| C3B42_RS05325 () | 1050975..1051652 | + | 678 | WP_164469499.1 | anaerobic ribonucleoside-triphosphate reductase activating protein | - |
| C3B42_RS05330 () | 1051656..1052795 | - | 1140 | WP_164469500.1 | dihydropteroate synthase | - |
| C3B42_RS05335 () | 1052792..1053418 | - | 627 | WP_066168509.1 | DNA polymerase III subunit delta' | - |
| C3B42_RS05340 () | 1053418..1053969 | - | 552 | WP_066157455.1 | HobA family DNA replication regulator | - |
| C3B42_RS05345 () | 1053971..1055182 | - | 1212 | WP_066222963.1 | aspartate kinase | - |
| C3B42_RS05350 () | 1055203..1055694 | - | 492 | WP_066157449.1 | RNA pyrophosphohydrolase | - |
| C3B42_RS05355 () | 1055749..1056837 | + | 1089 | WP_066403958.1 | coproporphyrinogen III oxidase family protein | - |
| C3B42_RS05360 () | 1056850..1057689 | + | 840 | WP_164469501.1 | peptide chain release factor N(5)-glutamine methyltransferase | - |
| C3B42_RS05365 () | 1057716..1059680 | + | 1965 | WP_164469502.1 | M3 family metallopeptidase | - |
| C3B42_RS05370 () | 1059743..1060285 | + | 543 | WP_066157440.1 | hypothetical protein | - |
| C3B42_RS05375 () | 1060295..1060570 | + | 276 | WP_066157437.1 | hypothetical protein | - |
| C3B42_RS05380 () | 1060591..1060845 | + | 255 | WP_164469503.1 | hypothetical protein | - |
| C3B42_RS05385 () | 1060902..1062104 | + | 1203 | WP_164469504.1 | diguanylate cyclase | - |
| C3B42_RS05390 () | 1062107..1062472 | + | 366 | WP_164469505.1 | YbgC/FadM family acyl-CoA thioesterase | - |
| C3B42_RS05395 () | 1062473..1062943 | + | 471 | WP_066157428.1 | Phospholipase D | VF |
| C3B42_RS05400 () | 1062977..1064194 | + | 1218 | WP_164469506.1 | M48 family metallopeptidase | - |
| C3B42_RS05405 () | 1064191..1065359 | + | 1169 | Protein_1057 | DNA recombination protein RmuC | - |
| C3B42_RS05410 () | 1065363..1066250 | + | 888 | WP_164469507.1 | neutral zinc metallopeptidase | - |
| C3B42_RS05415 () | 1066247..1067104 | - | 858 | WP_164470161.1 | DMT family transporter | - |
| C3B42_RS05420 () | 1067146..1068366 | - | 1221 | WP_164469508.1 | molybdopterin molybdotransferase MoeA | - |
| C3B42_RS05425 () | 1068369..1068566 | - | 198 | WP_164469509.1 | hypothetical protein | - |
| C3B42_RS05430 () | 1068678..1069460 | + | 783 | WP_164469510.1 | tRNA 2-thiocytidine biosynthesis protein TtcA | - |
| C3B42_RS05435 () | 1069457..1069951 | + | 495 | WP_164469511.1 | DUF523 domain-containing protein | - |
| C3B42_RS05440 () | 1069970..1070209 | - | 240 | WP_066157403.1 | hypothetical protein | - |
| C3B42_RS05445 () | 1070196..1070690 | - | 495 | WP_066157400.1 | hypothetical protein | - |
| C3B42_RS05450 () | 1070829..1071386 | + | 558 | WP_066348803.1 | CDP-alcohol phosphatidyltransferase family protein | - |
| C3B42_RS05455 () | 1071383..1072297 | + | 915 | WP_164469512.1 | exopolyphosphatase | - |
| C3B42_RS05460 () | 1072307..1073098 | - | 792 | WP_164469513.1 | hypothetical protein | - |
| C3B42_RS05465 () | 1073271..1074968 | + | 1698 | WP_066157388.1 | acetolactate synthase large subunit | - |
| C3B42_RS05470 () | 1074968..1075465 | + | 498 | WP_066157384.1 | acetolactate synthase small subunit | - |
| C3B42_RS05475 () | 1075469..1076416 | + | 948 | WP_066157382.1 | UDP-3-O-acylglucosamine N-acyltransferase | VF |
| C3B42_RS05480 () | 1076428..1078659 | + | 2232 | WP_164470162.1 | DNA translocase FtsK | VF |
| C3B42_RS05485 () | 1078683..1079390 | + | 708 | WP_066157380.1 | SDR family NAD(P)-dependent oxidoreductase | - |
| C3B42_RS05490 () | 1079422..1079574 | - | 153 | WP_164469514.1 | hypothetical protein | - |
| C3B42_RS05495 () | 1079676..1080206 | + | 531 | WP_066157375.1 | ribosome-associated translation inhibitor RaiA | - |
| C3B42_RS05500 () | 1080288..1081751 | + | 1464 | WP_066157372.1 | ribosome biogenesis GTPase Der | - |
| C3B42_RS05505 () | 1081765..1083321 | + | 1557 | WP_164470163.1 | SulP family inorganic anion transporter | - |
| C3B42_RS05510 () | 1083296..1083925 | + | 630 | WP_066157370.1 | uroporphyrinogen-III synthase | - |
| C3B42_RS05515 () | 1084161..1085432 | + | 1272 | WP_164469515.1 | Phosphoribosylamine--glycine ligase | VF |
| C3B42_RS05520 () | 1085434..1085877 | + | 444 | WP_066168687.1 | RDD family protein | - |
| C3B42_RS05525 () | 1085870..1088023 | + | 2154 | WP_164469516.1 | LPS-assembly protein LptD | - |
| C3B42_RS05530 () | 1088026..1088691 | + | 666 | WP_066157359.1 | ABC transporter | - |
| C3B42_RS05535 () | 1088688..1090832 | + | 2145 | WP_164469517.1 | polyribonucleotide nucleotidyltransferase | - |
| C3B42_RS05540 () | 1090897..1091265 | + | 369 | WP_066223040.1 | Chemotaxis protein CheY | VF |
| C3B42_RS05545 () | 1091289..1093364 | + | 2076 | WP_066157352.1 | Chemotaxis protein CheA | VF |
| C3B42_RS05550 () | 1093374..1094219 | + | 846 | WP_164469518.1 | Chemotaxis protein methyltransferase | VF |
| C3B42_RS05555 () | 1094216..1094890 | + | 675 | WP_066157346.1 | chemotaxis protein CheD | - |
| C3B42_RS05560 () | 1094910..1095983 | + | 1074 | WP_066157343.1 | Chemotaxis response regulator protein-glutamate methylesterase | VF |
| C3B42_RS05565 () | 1096139..1097191 | + | 1053 | WP_164469519.1 | Tyrosine recombinase XerH ; Integrase | Integrase |
| C3B42_RS05570 () | 1097267..1098379 | + | 1113 | WP_164469520.1 | molecular chaperone DnaJ | - |
| C3B42_RS10980 () | 1098406..1098759 | + | 354 | WP_206442780.1 | hypothetical protein | - |
| C3B42_RS10985 () | 1098759..1099001 | + | 243 | WP_206442781.1 | hypothetical protein | - |
| C3B42_RS05580 () | 1098998..1099654 | - | 657 | WP_164469521.1 | hypothetical protein | - |
| C3B42_RS05585 () | 1099658..1099846 | - | 189 | WP_164469522.1 | hypothetical protein | - |
| C3B42_RS05590 () | 1099918..1100736 | - | 819 | WP_164469523.1 | ferritin-like domain-containing protein | - |
| C3B42_RS05595 () | 1100793..1101389 | + | 597 | WP_164469524.1 | MBL fold metallo-hydrolase | - |
| C3B42_RS05600 () | 1101368..1102288 | + | 921 | WP_206442782.1 | diguanylate cyclase | - |
| C3B42_RS05605 () | 1102298..1103272 | + | 975 | WP_164469526.1 | GGDEF domain-containing protein | - |
| C3B42_RS05610 () | 1103286..1104200 | - | 915 | WP_164469527.1 | tRNA 5-methoxyuridine(34)/uridine 5-oxyacetic acid(34) synthase CmoB | - |
| C3B42_RS05615 () | 1104237..1105985 | - | 1749 | WP_164469528.1 | diguanylate cyclase | - |
| C3B42_RS05620 () | 1106297..1109053 | + | 2757 | WP_164469529.1 | cytochrome c biogenesis protein CcsA | - |
| C3B42_RS05625 () | 1109164..1110450 | + | 1287 | WP_164469530.1 | M20/M25/M40 family metallo-hydrolase | - |
| C3B42_RS05630 () | 1110497..1112953 | - | 2457 | WP_164469531.1 | cache domain-containing protein | - |
| C3B42_RS05640 () | 1113374..1113901 | - | 528 | WP_164469532.1 | LolA-like outer membrane lipoprotein chaperone | - |
| C3B42_RS05645 () | 1113961..1116567 | + | 2607 | WP_164469533.1 | preprotein translocase subunit SecA | - |
| C3B42_RS05650 () | 1116569..1117774 | + | 1206 | WP_164469534.1 | ABC transporter permease | - |
| C3B42_RS05655 () | 1117837..1118364 | - | 528 | WP_206442783.1 | molybdopterin adenylyltransferase | - |
| C3B42_RS05660 () | 1118361..1118879 | - | 519 | WP_164469535.1 | pimelyl-ACP methyl ester esterase BioV | - |
| C3B42_RS05665 () | 1118863..1120347 | - | 1485 | WP_066169060.1 | AAA family ATPase | - |
| C3B42_RS05670 () | 1120328..1121605 | - | 1278 | WP_164469536.1 | tRNA (N(6)-L-threonylcarbamoyladenosine(37)-C(2))- methylthiotransferase MtaB | - |
| C3B42_RS05675 () | 1121618..1123135 | - | 1518 | WP_164469537.1 | mechanosensitive ion channel | - |
| C3B42_RS05680 () | 1123147..1123299 | - | 153 | WP_164469538.1 | hypothetical protein | - |
| C3B42_RS05685 () | 1123300..1124334 | - | 1035 | WP_164469539.1 | 3-dehydroquinate synthase | - |
| C3B42_RS05690 () | 1124419..1126293 | - | 1875 | WP_164469540.1 | EAL domain-containing protein | - |
| C3B42_RS05695 () | 1126290..1126889 | - | 600 | WP_066168772.1 | transglutaminase-like cysteine peptidase | - |
| C3B42_RS05700 () | 1126971..1127468 | + | 498 | WP_164469541.1 | histidine phosphatase family protein | - |
| C3B42_RS05705 () | 1127479..1128426 | - | 948 | WP_164469542.1 | iron ABC transporter permease | - |
| C3B42_RS05710 () | 1128423..1129124 | - | 702 | WP_164469543.1 | ABC transporter ATP-binding protein | - |
| C3B42_RS05715 () | 1129102..1129929 | - | 828 | WP_164469544.1 | ABC transporter substrate-binding protein | - |
| C3B42_RS05720 () | 1129931..1131790 | - | 1860 | WP_164469545.1 | Vitamin B12 transporter BtuB | VF |
| C3B42_RS05725 () | 1131806..1131976 | - | 171 | WP_164469546.1 | hypothetical protein | - |
| C3B42_RS05730 () | 1132114..1132824 | - | 711 | WP_164469547.1 | sulfite exporter TauE/SafE family protein | - |
| C3B42_RS05735 () | 1132824..1133321 | - | 498 | WP_066168793.1 | hypothetical protein | - |
| C3B42_RS05740 () | 1133621..1134249 | + | 629 | Protein_1124 | HAD family hydrolase | - |
| C3B42_RS05745 () | 1134259..1134969 | - | 711 | WP_164469548.1 | pseudouridine synthase | - |
| C3B42_RS05750 () | 1134991..1135656 | + | 666 | WP_164469549.1 | leucyl/phenylalanyl-tRNA--protein transferase | - |
| C3B42_RS05755 () | 1135668..1136027 | - | 360 | WP_141050408.1 | hypothetical protein | - |
| C3B42_RS05760 () | 1136043..1136612 | - | 570 | WP_066404977.1 | TlpA family protein disulfide reductase | - |
| C3B42_RS05765 () | 1136609..1136899 | - | 291 | WP_164469550.1 | hypothetical protein | - |
| C3B42_RS05770 () | 1136899..1137552 | - | 654 | WP_164469551.1 | thioredoxin domain-containing protein | - |
| C3B42_RS05775 () | 1137609..1138010 | - | 402 | WP_164469552.1 | disulfide bond formation protein B | - |
| C3B42_RS05780 () | 1138096..1140621 | + | 2526 | WP_082744867.1 | glycosyltransferase | - |
| C3B42_RS05785 () | 1140643..1142268 | - | 1626 | WP_066168813.1 | cation:proton antiporter | - |
| C3B42_RS05790 () | 1142302..1143210 | - | 909 | WP_164469553.1 | class I SAM-dependent methyltransferase | - |
| C3B42_RS05795 () | 1143343..1144506 | - | 1164 | WP_164470165.1 | acyltransferase | - |
| C3B42_RS05800 () | 1144716..1145888 | + | 1173 | WP_164469554.1 | FecR family protein | - |
| C3B42_RS05805 () | 1145900..1147207 | + | 1308 | WP_164469555.1 | tetratricopeptide repeat protein | - |
| C3B42_RS05810 () | 1147204..1149366 | - | 2163 | WP_164469556.1 | adenylate/guanylate cyclase domain-containing protein | - |
| C3B42_RS05815 () | 1149359..1151686 | - | 2328 | WP_164469557.1 | HD domain-containing protein | - |
| C3B42_RS05820 () | 1151744..1152910 | - | 1167 | WP_164469558.1 | Aspartate aminotransferase | VF |
| C3B42_RS05825 () | 1152993..1153586 | + | 594 | WP_164469559.1 | DUF45 domain-containing protein | - |
| C3B42_RS05830 () | 1153588..1154028 | - | 441 | WP_164469560.1 | DUF721 domain-containing protein | - |
| C3B42_RS05835 () | 1154133..1155584 | + | 1452 | WP_164469561.1 | FAD-binding protein | - |
| C3B42_RS05840 () | 1155638..1157173 | + | 1536 | WP_164469562.1 | glutamine-hydrolyzing GMP synthase | - |
| C3B42_RS05845 () | 1157400..1157714 | + | 315 | WP_066168835.1 | hypothetical protein | - |
| C3B42_RS05850 () | 1157916..1158161 | + | 246 | WP_066157209.1 | type II toxin-antitoxin system Phd/YefM family antitoxin | Antitoxin Detail |
| C3B42_RS05855 () | 1158155..1158415 | + | 261 | WP_141052169.1 | Txe/YoeB family addiction module toxin | Toxin Detail |
| C3B42_RS10990 () | 1158511..1158819 | + | 309 | WP_206442784.1 | IS256 family transposase ISCbe6 | Transposase |
| C3B42_RS10995 () | 1158806..1159528 | + | 723 | WP_206442836.1 | IS256 family transposase | - |
| C3B42_RS11000 () | 1159462..1159749 | + | 288 | WP_198306481.1 | transposase | - |
| C3B42_RS05865 () | 1159851..1161053 | + | 1203 | WP_164469563.1 | IS256 family transposase | - |
| C3B42_RS05870 () | 1161136..1162838 | - | 1703 | Protein_1152 | YdiU family protein | - |
| C3B42_RS05875 () | 1163001..1164299 | + | 1299 | WP_164469564.1 | succinylglutamate desuccinylase/aspartoacylase family protein | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|