MGE detailed information
MGE type: Mobilizable plasmid MGE length: 121908 bp
Accession: NZ_CP026578 Location: 1..121908 Organism: Escherichia coli strain WCHEC005237 Replicon: plasmid pQnrS1_005237
Accession: NZ_CP026578 Location: 1..121908 Organism: Escherichia coli strain WCHEC005237 Replicon: plasmid pQnrS1_005237
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| C4E05_RS00940 () | 1..1011 | + | 1011 | WP_000200069.1 | RepB family plasmid replication initiator protein | - |
| C4E05_RS00950 () | 1860..2210 | + | 351 | Protein_1 | IS110 family transposase ISSm1 | Transposase |
| C4E05_RS00955 () | 2218..3018 | - | 801 | Protein_2 | Tn3 family transposase TnpA_Tn5403 | Transposase |
| C4E05_RS00960 () | 3087..3344 | + | 258 | Protein_3 | IS3 family transposase ISEc52 | Transposase |
| C4E05_RS00965 () | 3357..4448 | - | 1092 | Protein_4 | IS30 family transposase IS30D | Transposase |
| C4E05_RS00970 () | 4505..5718 | + | 1214 | WP_162829202.1 | IS3 family transposase IS1203 | Transposase |
| C4E05_RS00975 () | 5760..5858 | - | 99 | Protein_6 | type I restriction endonuclease | - |
| C4E05_RS00980 () | 6062..7927 | - | 1866 | WP_072851607.1 | DUF262 domain-containing protein | - |
| C4E05_RS25685 () | 8088..8228 | + | 141 | WP_167776298.1 | hypothetical protein | - |
| C4E05_RS00990 () | 8257..8954 | + | 698 | Protein_9 | IS1 family transposase IS1G | Transposase |
| C4E05_RS01000 () | 9148..9582 | - | 435 | Protein_10 | WYL domain-containing protein | - |
| C4E05_RS01005 () | 9579..10247 | - | 669 | Protein_11 | IS5 family transposase ISKpn26 | Transposase |
| C4E05_RS01010 () | 10335..10577 | - | 243 | Protein_12 | N-acetylneuraminic acid mutarotase | - |
| C4E05_RS01015 () | 10802..11905 | - | 1104 | WP_000777276.1 | HNH endonuclease | - |
| C4E05_RS01020 () | 11909..12616 | - | 708 | WP_000357807.1 | OmpA family protein | - |
| C4E05_RS01025 () | 12623..14275 | - | 1653 | WP_000880884.1 | MotA/TolQ/ExbB proton channel family protein | - |
| C4E05_RS01030 () | 14487..17846 | + | 3360 | WP_023281478.1 | STY4851/ECs_5259 family protein | - |
| C4E05_RS01035 () | 17846..24160 | + | 6315 | WP_094885491.1 | DEAD/DEAH box helicase | - |
| C4E05_RS01040 () | 24384..27242 | + | 2859 | WP_001041504.1 | DEAD/DEAH box helicase | - |
| C4E05_RS01045 () | 27245..32155 | + | 4911 | WP_094885493.1 | class I SAM-dependent DNA methyltransferase | - |
| C4E05_RS01050 () | 32155..38496 | + | 6342 | WP_094885495.1 | DEAD/DEAH box helicase | - |
| C4E05_RS01055 () | 38493..40607 | + | 2115 | WP_094885497.1 | ATP-dependent helicase | - |
| C4E05_RS01060 () | 40768..41710 | + | 943 | Protein_22 | IS3 family transposase IS2 | Transposase |
| C4E05_RS01065 () | 41737..42433 | - | 697 | Protein_23 | IS1 family transposase | - |
| C4E05_RS01070 () | 42827..43855 | + | 1029 | WP_072851570.1 | tyrosine-type recombinase/integrase | - |
| C4E05_RS01080 () | 44093..44473 | - | 381 | WP_024166788.1 | type II toxin-antitoxin system death-on-curing family toxin | Toxin Detail |
| C4E05_RS01085 () | 44473..44694 | - | 222 | WP_033545779.1 | type II toxin-antitoxin system Phd/YefM family antitoxin | Antitoxin Detail |
| C4E05_RS01090 () | 44767..45159 | - | 393 | WP_000506718.1 | hypothetical protein | - |
| C4E05_RS01095 () | 45271..45519 | - | 249 | WP_001286530.1 | DNA polymerase III subunit theta | - |
| C4E05_RS01100 () | 45522..45722 | - | 201 | WP_001408980.1 | hypothetical protein | - |
| C4E05_RS01105 () | 45858..46097 | - | 240 | Protein_30 | hypothetical protein | - |
| C4E05_RS01110 () | 46145..46285 | - | 141 | WP_107524640.1 | DUF4752 family protein | - |
| C4E05_RS01115 () | 46276..46980 | + | 705 | WP_001067855.1 | IS6-like element IS26 family transposase | - |
| C4E05_RS01120 () | 47033..49246 | + | 2214 | Protein_33 | Tn3 family transposase ISEc63 | Transposase |
| C4E05_RS01125 () | 49846..50232 | + | 387 | WP_001039463.1 | hypothetical protein | - |
| C4E05_RS01130 () | 50241..50432 | + | 192 | WP_000861580.1 | hypothetical protein | - |
| C4E05_RS01135 () | 50510..53449 | + | 2940 | WP_072851586.1 | AAA family ATPase | - |
| C4E05_RS01140 () | 53446..54870 | + | 1425 | WP_072851583.1 | tetratricopeptide repeat protein | - |
| C4E05_RS01155 () | 55057..56025 | + | 969 | WP_000654804.1 | IS5 family transposase IS903B | Transposase |
| C4E05_RS01160 () | 56297..56554 | + | 258 | WP_104732852.1 | hypothetical protein | - |
| C4E05_RS01165 () | 56570..57235 | + | 666 | Protein_40 | phage tail protein | - |
| C4E05_RS01170 () | 57270..59021 | - | 1752 | Protein_41 | Tn3 family transposase TnpA_TnAs1 | Transposase |
| C4E05_RS01175 () | 59010..59417 | + | 408 | WP_001214976.1 | cysteine hydrolase | - |
| C4E05_RS01180 () | 59555..60439 | + | 885 | WP_000058717.1 | EamA family transporter | - |
| C4E05_RS01185 () | 60471..61670 | - | 1200 | WP_000804064.1 | tetracycline efflux MFS transporter Tet(A) | - |
| C4E05_RS01190 () | 61776..62426 | + | 651 | WP_001493764.1 | tetracycline resistance transcriptional repressor TetR(A) | - |
| C4E05_RS01195 () | 62458..62700 | - | 243 | WP_000844627.1 | transposase | - |
| C4E05_RS01200 () | 62818..63408 | + | 591 | WP_012477564.1 | plasmid pRiA4b ORF-3 family protein | - |
| C4E05_RS01205 () | 63545..64117 | + | 573 | WP_001493762.1 | Tn3 family transposase TnpR_ISPa40 | Transposase |
| C4E05_RS01210 () | 64154..65545 | + | 1392 | WP_001493761.1 | ISKra4 family transposase ISKpn19 | Transposase |
| C4E05_RS01215 () | 65578..66006 | + | 429 | Protein_50 | Tn3 family transposase TnpR_ISMex22 | Transposase |
| C4E05_RS01220 () | 66325..66981 | - | 657 | WP_001516695.1 | Pentapeptide repeat protein | ARG |
| C4E05_RS01225 () | 67376..67992 | + | 617 | Protein_52 | transposase | - |
| C4E05_RS01230 () | 68059..68763 | + | 705 | WP_001067855.1 | IS6-like element IS26 family transposase | - |
| C4E05_RS01235 () | 68817..69821 | - | 1005 | Protein_54 | IS91 family transposase ISAzo26 | Transposase |
| C4E05_RS01240 () | 69977..70450 | + | 474 | WP_004201280.1 | Dihydrofolate reductase type 1 | ARG |
| C4E05_RS01245 () | 70697..71401 | + | 705 | WP_001067855.1 | IS6-like element IS26 family transposase | - |
| C4E05_RS01255 () | 71596..71979 | - | 384 | WP_094885533.1 | hypothetical protein | - |
| C4E05_RS01260 () | 71981..74986 | - | 3006 | WP_001143775.1 | Tn3 family transposase TnpA_Tn3 | Transposase |
| C4E05_RS01265 () | 75148..75705 | + | 558 | WP_001235713.1 | Tn3 family transposase TnpR_Tn3 | Transposase |
| C4E05_RS01270 () | 75888..76748 | + | 861 | WP_000027057.1 | Beta-lactamase TEM | ARG |
| C4E05_RS01275 () | 77123..77683 | + | 561 | WP_001161490.1 | recombinase family protein | - |
| C4E05_RS25690 () | 77687..78058 | + | 372 | Protein_62 | DUF4158 domain-containing protein | - |
| C4E05_RS25695 () | 78038..78283 | + | 246 | WP_041937891.1 | hypothetical protein | - |
| C4E05_RS01285 () | 78315..78965 | - | 651 | WP_001493764.1 | tetracycline resistance transcriptional repressor TetR(A) | - |
| C4E05_RS01290 () | 79071..80270 | + | 1200 | WP_000804063.1 | tetracycline efflux MFS transporter Tet(A) | - |
| C4E05_RS01295 () | 80237..80425 | - | 189 | Protein_66 | IS91 family transposase | - |
| C4E05_RS01300 () | 80537..80842 | - | 306 | WP_001255015.1 | HTH-type transcriptional regulator CynR | VF |
| C4E05_RS01305 () | 80870..82084 | - | 1215 | WP_000214121.1 | Bicyclomycin resistance protein | ARG |
| C4E05_RS01310 () | 82301..83185 | - | 885 | WP_001447541.1 | DUF3363 domain-containing protein | - |
| C4E05_RS01315 () | 83216..84709 | - | 1494 | WP_001120888.1 | IS91 family transposase ISVsa3 | Transposase |
| C4E05_RS01320 () | 84920..85144 | - | 225 | WP_000743213.1 | hypothetical protein | - |
| C4E05_RS01325 () | 85141..85878 | - | 738 | WP_001446887.1 | Tn3 family transposase TnpR_TnEc1 | Transposase |
| C4E05_RS25700 () | 86364..86504 | - | 141 | WP_001044210.1 | hypothetical protein | - |
| C4E05_RS01335 () | 86510..87214 | - | 705 | WP_001067855.1 | IS6-like element IS26 family transposase | - |
| C4E05_RS01350 () | 88649..89856 | + | 1208 | WP_089617520.1 | IS3 family transposase ISEcl1 | Transposase |
| C4E05_RS01355 () | 89883..90197 | - | 315 | Protein_76 | RepA protein | - |
| C4E05_RS01360 () | 90710..92428 | - | 1719 | WP_000739198.1 | hybrid sensor histidine kinase/response regulator | - |
| C4E05_RS01365 () | 92425..92913 | - | 489 | WP_000238872.1 | molybdopterin-dependent oxidoreductase | - |
| C4E05_RS01370 () | 92906..93889 | - | 984 | WP_072851549.1 | hypothetical protein | - |
| C4E05_RS01375 () | 93893..94807 | - | 915 | WP_000891983.1 | response regulator | - |
| C4E05_RS01380 () | 95121..95429 | + | 309 | WP_000062770.1 | hypothetical protein | - |
| C4E05_RS01385 () | 95422..95637 | + | 216 | WP_001112907.1 | hypothetical protein | - |
| C4E05_RS01390 () | 95640..96302 | + | 663 | WP_000958205.1 | Type IV secretion system protein virB1 | VF |
| C4E05_RS01395 () | 96313..96612 | + | 300 | WP_000175462.1 | TrbC/VirB2 family protein | - |
| C4E05_RS01400 () | 96622..99372 | + | 2751 | WP_063078619.1 | Type IV secretion system protein virB4 | VF |
| C4E05_RS01405 () | 99391..100107 | + | 717 | WP_000770034.1 | type IV secretion system protein | - |
| C4E05_RS01410 () | 100119..100403 | + | 285 | WP_000769859.1 | EexN family lipoprotein | - |
| C4E05_RS01415 () | 100421..101428 | + | 1008 | WP_000014166.1 | type IV secretion system protein | - |
| C4E05_RS25705 () | 101505..101645 | + | 141 | WP_000873539.1 | hypothetical protein | - |
| C4E05_RS01420 () | 101638..102324 | + | 687 | WP_072851547.1 | type IV secretion system protein | - |
| C4E05_RS01425 () | 102317..103210 | + | 894 | WP_001045307.1 | P-type conjugative transfer protein VirB9 | - |
| C4E05_RS01430 () | 103207..104403 | + | 1197 | WP_094885502.1 | Type IV secretion system protein virB10 | VF |
| C4E05_RS01435 () | 104407..105456 | + | 1050 | WP_072851541.1 | Type IV secretion system protein VirB11 | VF |
| C4E05_RS01440 () | 105443..105844 | + | 402 | WP_000979494.1 | hypothetical protein | - |
| C4E05_RS01445 () | 105935..106252 | + | 318 | WP_000683352.1 | hypothetical protein | - |
| C4E05_RS01450 () | 106279..106614 | + | 336 | WP_000610141.1 | hypothetical protein | - |
| C4E05_RS01455 () | 106590..106898 | + | 309 | WP_000212005.1 | hypothetical protein | - |
| C4E05_RS01460 () | 106895..109096 | + | 2202 | WP_072851538.1 | type IA DNA topoisomerase | - |
| C4E05_RS01465 () | 109093..109485 | + | 393 | WP_001079960.1 | H-NS histone family protein | - |
| C4E05_RS01470 () | 110194..112101 | + | 1908 | WP_072851534.1 | TraM recognition domain-containing protein | - |
| C4E05_RS01475 () | 112116..112862 | + | 747 | WP_072851531.1 | molybdopterin-guanine dinucleotide biosynthesis protein MobC | - |
| C4E05_RS01480 () | 112855..113382 | + | 528 | WP_072851528.1 | Phospholipase D | VF |
| C4E05_RS01485 () | 113413..113844 | - | 432 | WP_001776120.1 | hypothetical protein | - |
| C4E05_RS25710 () | 113976..114152 | - | 177 | WP_013438824.1 | hypothetical protein | - |
| C4E05_RS01490 () | 114324..115289 | - | 966 | WP_077252056.1 | DUF1738 domain-containing protein | - |
| C4E05_RS01495 () | 115741..116166 | + | 426 | WP_001776124.1 | translesion error-prone DNA polymerase V autoproteolytic subunit | - |
| C4E05_RS01500 () | 116166..117437 | + | 1272 | WP_072851522.1 | Y-family DNA polymerase | - |
| C4E05_RS01505 () | 117516..117767 | + | 252 | WP_000181753.1 | hypothetical protein | - |
| C4E05_RS01510 () | 117821..118126 | + | 306 | WP_000534920.1 | hypothetical protein | - |
| C4E05_RS01525 () | 119031..120002 | - | 972 | WP_000817037.1 | ParB/RepB/Spo0J family plasmid partition protein | - |
| C4E05_RS01530 () | 120002..121168 | - | 1167 | WP_063501643.1 | Sporulation initiation inhibitor protein Soj | VF |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|