MGE detailed information
MGE type: Conjugative plasmid MGE length: 69519 bp
Accession: NZ_CP026565 Location: 1..69519 Organism: Pseudomonas avellanae strain R2leaf Replicon: plasmid p3_tig6
Accession: NZ_CP026565 Location: 1..69519 Organism: Pseudomonas avellanae strain R2leaf Replicon: plasmid p3_tig6
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| BKM03_RS31185 () | 1..273 | + | 273 | WP_065348678.1 | arylsulfatase regulator | - |
| BKM03_RS31190 () | 487..1170 | + | 684 | WP_080439508.1 | Mobilization protein A | Relaxase |
| BKM03_RS31195 () | 1136..1525 | + | 390 | Protein_2 | IS5 family transposase IS52 | Transposase |
| BKM03_RS31215 () | 2594..3271 | + | 678 | Protein_3 | IS21 family transposase ISPsy4 | Transposase |
| BKM03_RS31220 () | 3268..4077 | + | 810 | WP_005741073.1 | IS21 family transposase ISPsy4 | Transposase |
| BKM03_RS31235 () | 5144..5749 | - | 606 | WP_060403786.1 | T3SS effector protein kinase HopBF1 | - |
| BKM03_RS31240 () | 5874..7106 | + | 1233 | WP_104698134.1 | IS91 family transposase IS801 | Transposase |
| BKM03_RS31250 () | 7381..7662 | + | 282 | WP_060402791.1 | hypothetical protein | - |
| BKM03_RS31255 () | 7643..8872 | + | 1230 | WP_065348575.1 | IS91 family transposase IS801 | Transposase |
| BKM03_RS31265 () | 9125..9382 | + | 258 | WP_003381346.1 | Arc family DNA-binding protein | Antitoxin Detail |
| BKM03_RS31270 () | 9379..9798 | + | 420 | WP_060402639.1 | type II toxin-antitoxin system VapC family toxin | Toxin Detail |
| BKM03_RS31275 () | 9839..10477 | + | 639 | WP_060402640.1 | Tn3 family transposase TnpR_TnEc1 | Transposase |
| BKM03_RS31285 () | 11016..19430 | + | 8415 | WP_104685814.1 | type III effector protein XopAD | - |
| BKM03_RS31290 () | 19532..19813 | + | 282 | WP_060402126.1 | hypothetical protein | - |
| BKM03_RS31295 () | 19900..22926 | - | 3027 | WP_060404205.1 | Tn3 family transposase TnpA_ISPsy30 | Transposase |
| BKM03_RS31300 () | 22916..23512 | - | 597 | WP_057425230.1 | Tn3 family transposase TnpR_ISPsy30 | Transposase |
| BKM03_RS32830 () | 23829..24359 | - | 531 | WP_167400463.1 | type III effector | - |
| BKM03_RS31310 () | 25227..27257 | - | 2031 | WP_060402483.1 | Methyl-accepting chemotaxis protein McpQ | VF |
| BKM03_RS31315 () | 27694..27930 | + | 237 | Protein_18 | recombinase family protein | - |
| BKM03_RS31320 () | 28024..28296 | + | 273 | WP_060402368.1 | hypothetical protein | - |
| BKM03_RS31325 () | 28509..29183 | + | 675 | WP_081082489.1 | Mobilization protein A | Relaxase |
| BKM03_RS31330 () | 29180..29707 | - | 528 | WP_057416414.1 | hypothetical protein | - |
| BKM03_RS31335 () | 29823..30116 | - | 294 | WP_003348565.1 | type II toxin-antitoxin system RelE/ParE family toxin | - |
| BKM03_RS31345 () | 30388..30681 | - | 294 | WP_060402369.1 | HU family DNA-binding protein | - |
| BKM03_RS31350 () | 30907..32220 | - | 1314 | WP_053479516.1 | replication initiation protein | - |
| BKM03_RS31355 () | 32617..32844 | - | 228 | WP_060402370.1 | hypothetical protein | - |
| BKM03_RS31360 () | 32861..33763 | - | 903 | WP_060402371.1 | hypothetical protein | - |
| BKM03_RS31370 () | 34117..34545 | - | 429 | WP_015060872.1 | GntR family transcriptional regulator | - |
| BKM03_RS31375 () | 34675..34920 | - | 246 | WP_104814059.1 | hypothetical protein | - |
| BKM03_RS31380 () | 34937..35839 | - | 903 | WP_060402371.1 | hypothetical protein | - |
| BKM03_RS31390 () | 36193..36621 | - | 429 | WP_015060872.1 | GntR family transcriptional regulator | - |
| BKM03_RS32835 () | 36751..36888 | - | 138 | WP_015060871.1 | hypothetical protein | - |
| BKM03_RS31395 () | 36965..37204 | - | 240 | WP_004666950.1 | hypothetical protein | - |
| BKM03_RS32480 () | 37269..41042 | - | 3774 | WP_158662244.1 | hypothetical protein | Relaxase |
| BKM03_RS31420 () | 41032..41757 | - | 726 | WP_060402373.1 | relaxosome protein | - |
| BKM03_RS31425 () | 42116..42505 | + | 390 | WP_020304529.1 | hypothetical protein | - |
| BKM03_RS31430 () | 42520..43092 | - | 573 | WP_002556108.1 | hypothetical protein | - |
| BKM03_RS31435 () | 43089..43808 | - | 720 | WP_060402374.1 | hypothetical protein | - |
| BKM03_RS31440 () | 44149..44721 | - | 573 | WP_060402375.1 | single-stranded DNA-binding protein | - |
| BKM03_RS31445 () | 44749..45033 | - | 285 | WP_044423981.1 | hypothetical protein | - |
| BKM03_RS31450 () | 45062..47227 | - | 2166 | WP_060402376.1 | type IA DNA topoisomerase | - |
| BKM03_RS31455 () | 47342..48061 | + | 720 | WP_146047715.1 | hypothetical protein | - |
| BKM03_RS31460 () | 48050..48601 | - | 552 | WP_095205442.1 | hypothetical protein | - |
| BKM03_RS31465 () | 48689..49087 | - | 399 | WP_060402378.1 | hypothetical protein | - |
| BKM03_RS31470 () | 49117..49479 | - | 363 | WP_060402379.1 | killer protein | - |
| BKM03_RS31475 () | 49520..51193 | - | 1674 | WP_060402380.1 | type IV secretory system conjugative DNA transfer family protein | - |
| BKM03_RS31480 () | 51193..51426 | - | 234 | WP_053486459.1 | hypothetical protein | - |
| BKM03_RS31485 () | 51423..51641 | - | 219 | WP_053480608.1 | hypothetical protein | VF |
| BKM03_RS31490 () | 51641..51874 | - | 234 | WP_004667999.1 | hypothetical protein | - |
| BKM03_RS31495 () | 51990..54401 | - | 2412 | WP_060402381.1 | ATP-binding protein | - |
| BKM03_RS31500 () | 54526..54792 | - | 267 | WP_060402382.1 | hypothetical protein | - |
| BKM03_RS31505 () | 54839..55204 | - | 366 | WP_002556101.1 | hypothetical protein | - |
| BKM03_RS31510 () | 55189..55575 | - | 387 | WP_060402383.1 | hypothetical protein | - |
| BKM03_RS31515 () | 55585..56643 | - | 1059 | WP_060402384.1 | Type IV secretion system protein VirB11 | VF |
| BKM03_RS31520 () | 56653..58014 | - | 1362 | WP_060402385.1 | Type IV secretion system protein virB10 | VF |
| BKM03_RS31525 () | 58001..58810 | - | 810 | WP_060402386.1 | TrbG/VirB9 family P-type conjugative transfer protein | - |
| BKM03_RS31530 () | 58800..59588 | - | 789 | WP_060402387.1 | Type IV secretion system protein virB8 | VF |
| BKM03_RS31535 () | 59626..59931 | - | 306 | WP_081026819.1 | conjugal transfer protein | - |
| BKM03_RS31540 () | 60000..60944 | - | 945 | WP_031598977.1 | type IV secretion system protein | - |
| BKM03_RS31545 () | 60971..61177 | - | 207 | WP_031598978.1 | hypothetical protein | - |
| BKM03_RS31550 () | 61192..61872 | - | 681 | WP_060402388.1 | P-type DNA transfer protein VirB5 | - |
| BKM03_RS31555 () | 61869..64421 | - | 2553 | WP_180275293.1 | conjugal transfer protein | - |
| BKM03_RS31565 () | 64771..65106 | - | 336 | WP_031599242.1 | hypothetical protein | - |
| BKM03_RS31570 () | 65106..65813 | - | 708 | WP_057407271.1 | Type IV secretion system protein virB1 | VF |
| BKM03_RS31575 () | 66164..66394 | - | 231 | WP_010215521.1 | helix-turn-helix domain-containing protein | - |
| BKM03_RS31580 () | 66482..67147 | + | 666 | WP_024647998.1 | LexA family transcriptional regulator | - |
| BKM03_RS31585 () | 67571..67825 | - | 255 | WP_003381801.1 | hypothetical protein | - |
| BKM03_RS31590 () | 67861..68493 | - | 633 | WP_003381804.1 | ParA family protein | - |
| BKM03_RS31595 () | 68792..69427 | + | 636 | WP_065348699.1 | Tn3 family transposase TnpR_TnEc1 | Transposase |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|