MGE detailed information
MGE type: Genomic_island MGE length: 72802 bp
Accession: NZ_CP026491 Location: 3314037..3386838 Organism: Escherichia coli strain HS13-1 Replicon: chromosome
Accession: NZ_CP026491 Location: 3314037..3386838 Organism: Escherichia coli strain HS13-1 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| C3K24_RS17055 () | 3310443..3311162 | - | 720 | WP_000611291.1 | two-component system response regulator DcuR | - |
| C3K24_RS17060 () | 3311159..3312790 | - | 1632 | WP_001216482.1 | sensor histidine kinase | - |
| C3K24_RS17065 () | 3312971..3313201 | + | 231 | WP_000373293.1 | (4Fe-4S)-binding protein | - |
| C3K24_RS17070 () | 3313213..3313485 | + | 273 | WP_000405647.1 | N-acetyltransferase | - |
| C3K24_RS17075 () | 3313713..3314009 | + | 297 | WP_001312331.1 | type V toxin-antitoxin system endoribonuclease antitoxin GhoS | - |
| C3K24_RS17080 () | 3314037..3314210 | + | 174 | WP_001173343.1 | type V toxin-antitoxin system toxin GhoT | - |
| C3K24_RS17085 () | 3314329..3315846 | - | 1518 | WP_000003806.1 | lysine--tRNA ligase | - |
| C3K24_RS17090 () | 3316083..3317540 | - | 1458 | WP_000856826.1 | dipeptide/tripeptide permease DtpC | - |
| C3K24_RS17095 () | 3317599..3319746 | - | 2148 | WP_001296667.1 | lysine decarboxylase CadA | - |
| C3K24_RS17100 () | 3319826..3321160 | - | 1335 | WP_000092909.1 | cadaverine/lysine antiporter | - |
| C3K24_RS17110 () | 3321526..3323064 | - | 1539 | WP_001187191.1 | lysine decarboxylation/transport transcriptional activator CadC | - |
| C3K24_RS17120 () | 3323899..3324459 | - | 561 | Protein_3142 | DUF4942 domain-containing protein | - |
| C3K24_RS17125 () | 3324544..3324741 | - | 198 | WP_085949158.1 | DUF957 domain-containing protein | - |
| C3K24_RS17130 () | 3324769..3324966 | - | 198 | Protein_3144 | hypothetical protein | - |
| C3K24_RS17135 () | 3324963..3325340 | - | 378 | WP_000854820.1 | type IV toxin-antitoxin system toxin CbtA | Toxin Detail |
| C3K24_RS17140 () | 3325429..3325797 | - | 369 | WP_001285610.1 | type IV toxin-antitoxin system YeeU family antitoxin | Antitoxin Detail |
| C3K24_RS17145 () | 3325877..3326098 | - | 222 | WP_000692347.1 | DUF987 domain-containing protein | - |
| C3K24_RS17150 () | 3326185..3326661 | - | 477 | WP_001186193.1 | RadC family protein | - |
| C3K24_RS17155 () | 3326676..3327155 | - | 480 | WP_000706978.1 | antirestriction protein | - |
| C3K24_RS17160 () | 3327421..3328239 | - | 819 | WP_001175155.1 | DUF945 domain-containing protein | - |
| C3K24_RS17165 () | 3328329..3328562 | - | 234 | WP_000883181.1 | DUF905 family protein | - |
| C3K24_RS17170 () | 3328568..3329245 | - | 678 | WP_001097565.1 | hypothetical protein | - |
| C3K24_RS17175 () | 3329396..3330076 | - | 681 | WP_001278649.1 | WYL domain-containing protein | - |
| C3K24_RS17180 () | 3330279..3331163 | - | 885 | WP_001116794.1 | 50S ribosome-binding GTPase | - |
| C3K24_RS17190 () | 3331264..3332487 | + | 1224 | WP_001107219.1 | hypothetical protein | - |
| C3K24_RS17195 () | 3333940..3334671 | + | 732 | WP_001075472.1 | inovirus Gp2 family protein | - |
| C3K24_RS17200 () | 3335018..3335593 | + | 576 | WP_000991593.1 | hypothetical protein | - |
| C3K24_RS17205 () | 3335662..3335895 | + | 234 | WP_000958492.1 | AlpA family transcriptional regulator | - |
| C3K24_RS17210 () | 3335907..3336132 | + | 226 | Protein_3159 | hypothetical protein | - |
| C3K24_RS17215 () | 3336194..3336460 | - | 267 | Protein_3160 | IS3 family transposase IS2 | Transposase |
| C3K24_RS17220 () | 3336551..3337708 | + | 1158 | Protein_3161 | Multidrug resistance protein MdtB | VF |
| C3K24_RS29510 () | 3337829..3338479 | + | 651 | Protein_3162 | TetR/AcrR family transcriptional regulator | - |
| C3K24_RS29235 () | 3338451..3338796 | + | 346 | Protein_3163 | hypothetical protein | VF |
| C3K24_RS17240 () | 3339153..3339698 | - | 546 | WP_000015571.1 | propanediol utilization system shell hexameric protein GrpS | - |
| C3K24_RS17245 () | 3339743..3340894 | - | 1152 | WP_001001005.1 | propanediol utilization system methionine adenosyltransferase GrpR | - |
| C3K24_RS17250 () | 3341023..3342078 | - | 1056 | WP_000494233.1 | HTH-type transcriptional activator RhaR | VF |
| C3K24_RS17255 () | 3342095..3343357 | - | 1263 | WP_001329690.1 | propanediol utilization sensor histidine kinase GrpP | - |
| C3K24_RS17265 () | 3343907..3344500 | - | 594 | Protein_3168 | maturase | - |
| C3K24_RS17270 () | 3344500..3344869 | - | 370 | Protein_3169 | reverse transcriptase/maturase | - |
| C3K24_RS17280 () | 3345481..3346386 | - | 906 | WP_001086421.1 | propanediol utilization system permease GrpO | - |
| C3K24_RS17285 () | 3346523..3347440 | - | 918 | WP_001044977.1 | glycyl radical diol dehydratase-activating enzyme GrpN | - |
| C3K24_RS17290 () | 3347549..3350101 | - | 2553 | WP_000890295.1 | glycyl radical diol dehydratase GrpM | - |
| C3K24_RS17295 () | 3350150..3350725 | - | 576 | WP_000722279.1 | propanediol utilization system protease GrpL | - |
| C3K24_RS17300 () | 3350736..3351035 | - | 300 | WP_000746009.1 | propanediol utilization system shell hexameric protein GrpK | - |
| C3K24_RS17305 () | 3351059..3352576 | - | 1518 | WP_000997839.1 | N-succinylglutamate 5-semialdehyde dehydrogenase | VF |
| C3K24_RS17310 () | 3352637..3353422 | - | 786 | WP_001205499.1 | propanediol utilization microcompartment protein GrpI | - |
| C3K24_RS17315 () | 3353444..3353725 | - | 282 | WP_001301171.1 | propanediol utilization system shell hexameric protein GrpH | - |
| C3K24_RS17320 () | 3354010..3355206 | - | 1197 | WP_001362987.1 | propanediol utilization system propionate kinase GrpG | - |
| C3K24_RS17325 () | 3355235..3355732 | - | 498 | WP_001332069.1 | propanediol utilization system heme-binding protein GrpF | - |
| C3K24_RS17330 () | 3355760..3356029 | - | 270 | WP_000280292.1 | propanediol utilization microcompartment vertex protein GrpE | - |
| C3K24_RS17335 () | 3356041..3356766 | - | 726 | WP_002430742.1 | propanediol utilization system flavoprotein GrpD | - |
| C3K24_RS17340 () | 3356750..3357508 | - | 759 | WP_001332070.1 | propanediol utilization system chaperone GrpC | - |
| C3K24_RS17345 () | 3357563..3358249 | - | 687 | WP_001109982.1 | propanediol utilization system phosphotransacylase GrpB | - |
| C3K24_RS17350 () | 3358389..3359507 | - | 1119 | WP_000135343.1 | hypothetical protein | VF |
| C3K24_RS17355 () | 3359858..3360357 | + | 500 | Protein_3185 | DNA-binding protein | - |
| C3K24_RS17360 () | 3360453..3360686 | + | 234 | WP_000124175.1 | hypothetical protein | - |
| C3K24_RS17365 () | 3360739..3360930 | - | 192 | WP_001287878.1 | DUF4222 domain-containing protein | - |
| C3K24_RS17370 () | 3361592..3361960 | + | 369 | WP_001350801.1 | ShlB/FhaC/HecB family hemolysin secretion/activation protein | - |
| C3K24_RS17375 () | 3361930..3362430 | + | 501 | WP_072145580.1 | type VI secretion protein ImpA | - |
| C3K24_RS17380 () | 3362669..3363772 | + | 1104 | WP_104976678.1 | hypothetical protein | - |
| C3K24_RS17385 () | 3364196..3365980 | + | 1785 | WP_000269403.1 | KAP family P-loop domain protein | - |
| C3K24_RS17390 () | 3365980..3366732 | + | 753 | WP_000537317.1 | hypothetical protein | - |
| C3K24_RS17395 () | 3366714..3368033 | + | 1320 | WP_000508958.1 | hypothetical protein | - |
| C3K24_RS17400 () | 3368030..3368755 | + | 726 | WP_000020778.1 | TatD family hydrolase | - |
| C3K24_RS17410 () | 3369308..3369883 | - | 576 | WP_000194395.1 | SLATT domain-containing protein | - |
| C3K24_RS17415 () | 3369891..3371219 | - | 1329 | WP_000019624.1 | nucleotidyltransferase | - |
| C3K24_RS17420 () | 3371354..3371539 | - | 186 | Protein_3197 | IS66 family transposase IS682 | Transposase |
| C3K24_RS17425 () | 3371560..3372716 | - | 1157 | Protein_3198 | IS3 family transposase | - |
| C3K24_RS17430 () | 3372786..3373133 | - | 348 | WP_000477079.1 | alcohol dehydrogenase catalytic domain-containing protein | - |
| C3K24_RS17440 () | 3373751..3374444 | - | 694 | Protein_3200 | IS1 family transposase IS1N | Transposase |
| C3K24_RS17445 () | 3374697..3376166 | + | 1470 | WP_001331566.1 | basic amino acid/polyamine antiporter | - |
| C3K24_RS17450 () | 3376271..3378640 | + | 2370 | WP_000671170.1 | arginine decarboxylase | - |
| C3K24_RS17455 () | 3378715..3380214 | + | 1500 | WP_001331567.1 | basic amino acid/polyamine antiporter | - |
| C3K24_RS17460 () | 3380357..3381054 | + | 698 | Protein_3204 | IS1 family transposase IS1S | Transposase |
| C3K24_RS17470 () | 3381521..3382072 | - | 552 | WP_001447126.1 | Transcriptional regulator SlyA | VF |
| C3K24_RS17475 () | 3382239..3383030 | - | 792 | Protein_3206 | IS3 family transposase | - |
| C3K24_RS17480 () | 3383047..3383744 | - | 698 | Protein_3207 | IS1 family transposase IS1S | Transposase |
| C3K24_RS17490 () | 3384274..3385317 | - | 1044 | WP_000147021.1 | hypothetical protein | - |
| C3K24_RS17495 () | 3385573..3386838 | - | 1266 | WP_001218869.1 | hypothetical protein ; Integrase | Integrase |
| C3K24_RS17505 () | 3387218..3387793 | - | 576 | WP_001188520.1 | transcriptional regulator | - |
| C3K24_RS17510 () | 3387830..3389527 | - | 1698 | WP_000068942.1 | protein-disulfide reductase DsbD | - |
| C3K24_RS17515 () | 3389503..3389841 | - | 339 | WP_000883409.1 | divalent cation tolerance protein CutA | - |
| C3K24_RS17520 () | 3389957..3391258 | - | 1302 | WP_000961959.1 | anaerobic C4-dicarboxylate transporter DcuA | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|