MGE detailed information
MGE type: IScluster/Tn MGE length: 12144 bp
Accession: NZ_CP026403 Location: 1845..13988 Organism: Escherichia coli strain ECONIH4 Replicon: plasmid pECO-816c
Accession: NZ_CP026403 Location: 1845..13988 Organism: Escherichia coli strain ECONIH4 Replicon: plasmid pECO-816c
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| C3F40_RS28490 () | 178..552 | - | 375 | WP_011977761.1 | hypothetical protein | - |
| C3F40_RS28495 () | 664..1617 | - | 954 | WP_001198018.1 | cation diffusion facilitator family transporter | - |
| C3F40_RS28505 () | 3258..3734 | + | 477 | WP_000043177.1 | hypothetical protein | VF |
| C3F40_RS28510 () | 4039..4389 | - | 351 | WP_000928911.1 | metalloregulator ArsR/SmtB family transcription factor | - |
| C3F40_RS28515 () | 4551..6209 | + | 1659 | WP_000706606.1 | FAD-dependent oxidoreductase | - |
| C3F40_RS28520 () | 6455..6919 | + | 465 | WP_001243598.1 | isoprenylcysteine carboxylmethyltransferase family protein | - |
| C3F40_RS28530 () | 7199..7723 | - | 525 | Protein_7 | IS5 family transposase ISKpn26 | Transposase |
| C3F40_RS28535 () | 7759..9198 | - | 1440 | Protein_8 | IS66 family transposase ISKox1 | Transposase |
| C3F40_RS28540 () | 9263..9967 | + | 705 | WP_001067855.1 | IS6 family transposase IS26 | Transposase |
| C3F40_RS28545 () | 9973..10206 | + | 234 | WP_089617563.1 | helix-turn-helix domain-containing protein | - |
| C3F40_RS28550 () | 10304..10720 | - | 417 | WP_104457618.1 | type II toxin-antitoxin system VapC family toxin | Toxin Detail |
| C3F40_RS28555 () | 10717..10947 | - | 231 | WP_001261282.1 | AbrB/MazE/SpoVT family DNA-binding domain-containing protein | Antitoxin Detail |
| C3F40_RS31620 () | 10904..11365 | + | 462 | WP_199773263.1 | hypothetical protein | - |
| C3F40_RS28565 () | 11509..11859 | + | 351 | WP_000493378.1 | hypothetical protein | - |
| C3F40_RS28570 () | 12019..12816 | - | 798 | WP_000544830.1 | IS21 family transposase IS21 | Transposase |
| C3F40_RS28575 () | 12816..13988 | - | 1173 | WP_042111630.1 | IS21 family transposase IS21 | Transposase |
| C3F40_RS28580 () | 14074..14253 | + | 180 | Protein_17 | hypothetical protein | - |
| C3F40_RS28590 () | 14305..15016 | - | 712 | Protein_18 | IS6 family transposase | - |
| C3F40_RS28600 () | 15085..15525 | + | 441 | Protein_19 | ISNCY family transposase | - |
| C3F40_RS28605 () | 15768..16631 | - | 864 | WP_000902059.1 | toll/interleukin-1 receptor domain-containing protein | - |
| C3F40_RS28610 () | 16648..17013 | - | 366 | WP_050427582.1 | hypothetical protein | - |
| C3F40_RS28620 () | 17462..18173 | - | 712 | Protein_22 | IS6 family transposase | - |
| C3F40_RS28625 () | 18239..18670 | + | 432 | WP_001707302.1 | hypothetical protein | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|