MGE detailed information
MGE type: Genomic_island MGE length: 47506 bp
Accession: NZ_CP026399 Location: 2680390..2727895 Organism: Escherichia coli strain ECONIH4 Replicon: chromosome
Accession: NZ_CP026399 Location: 2680390..2727895 Organism: Escherichia coli strain ECONIH4 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| C3F40_RS14375 () | 2676017..2676355 | + | 339 | WP_000883400.1 | divalent cation tolerance protein CutA | - |
| C3F40_RS14380 () | 2676331..2678028 | + | 1698 | WP_000068974.1 | protein-disulfide reductase DsbD | - |
| C3F40_RS14385 () | 2678065..2678640 | + | 576 | WP_001188520.1 | transcriptional regulator | - |
| C3F40_RS14395 () | 2679020..2680282 | + | 1263 | WP_001218854.1 | integrase arm-type DNA-binding domain-containing protein | - |
| C3F40_RS14400 () | 2680390..2681087 | - | 698 | Protein_2656 | IS1 family transposase IS1X4 | Transposase |
| C3F40_RS14410 () | 2681236..2681757 | + | 522 | Protein_2657 | hypothetical protein ; Integrase | Integrase |
| C3F40_RS14415 () | 2681827..2682063 | + | 237 | WP_024195749.1 | hypothetical protein | - |
| C3F40_RS14420 () | 2682079..2682351 | + | 273 | WP_001547725.1 | hypothetical protein | - |
| C3F40_RS14425 () | 2682382..2682591 | - | 210 | WP_001547726.1 | hypothetical protein | - |
| C3F40_RS14430 () | 2682688..2683725 | - | 1038 | WP_001547728.1 | major capsid protein | - |
| C3F40_RS14435 () | 2683750..2684094 | - | 345 | WP_001547729.1 | hypothetical protein | - |
| C3F40_RS14440 () | 2684280..2684567 | - | 288 | Protein_2663 | DDE-type integrase/transposase/recombinase | - |
| C3F40_RS14445 () | 2684584..2685660 | - | 1077 | WP_000227969.1 | IS110 family transposase ISEc21 | Transposase |
| C3F40_RS14455 () | 2685903..2686067 | - | 165 | Protein_2665 | IS3 family transposase | - |
| C3F40_RS14460 () | 2686202..2687710 | - | 1509 | WP_032142258.1 | group II intron reverse transcriptase/maturase | - |
| C3F40_RS14470 () | 2688383..2689092 | - | 710 | Protein_2667 | IS3 family transposase IS3 | Transposase |
| C3F40_RS14475 () | 2689207..2689716 | + | 510 | WP_001547734.1 | HNH endonuclease | - |
| C3F40_RS14480 () | 2690009..2690335 | + | 327 | WP_050559247.1 | transposase | - |
| C3F40_RS14485 () | 2690272..2691243 | + | 972 | Protein_2670 | IS66 family transposase ISEc22 | Transposase |
| C3F40_RS14490 () | 2691286..2692038 | + | 753 | Protein_2671 | IS30 family transposase IS30D | Transposase |
| C3F40_RS14495 () | 2692051..2692308 | - | 258 | Protein_2672 | IS3 family transposase ISEc52 | Transposase |
| C3F40_RS14505 () | 2692376..2692623 | + | 248 | Protein_2673 | IS30 family transposase | - |
| C3F40_RS14510 () | 2693160..2696309 | - | 3150 | WP_104457514.1 | Outer membrane protein IcsA autotransporter | VF |
| C3F40_RS14515 () | 2696489..2697469 | + | 981 | WP_001547740.1 | IS5 family transposase ISKpn26 | Transposase |
| C3F40_RS14525 () | 2697652..2698626 | + | 975 | WP_000130706.1 | porphobilinogen synthase | - |
| C3F40_RS14530 () | 2698754..2700477 | + | 1724 | Protein_2677 | GNAT family N-acetyltransferase | - |
| C3F40_RS14535 () | 2700545..2701396 | - | 852 | WP_001547743.1 | taurine dioxygenase | - |
| C3F40_RS14540 () | 2701393..2702220 | - | 828 | WP_001547744.1 | taurine ABC transporter permease TauC | - |
| C3F40_RS14545 () | 2702217..2702984 | - | 768 | WP_000932310.1 | Taurine import ATP-binding protein TauB | VF |
| C3F40_RS14550 () | 2702995..2703957 | - | 963 | WP_001018397.1 | taurine ABC transporter substrate-binding protein | - |
| C3F40_RS14555 () | 2704631..2705563 | - | 933 | WP_000081354.1 | homocysteine S-methyltransferase | - |
| C3F40_RS14560 () | 2705550..2706950 | - | 1401 | WP_001194698.1 | S-methylmethionine permease | - |
| C3F40_RS14565 () | 2707314..2708423 | + | 1110 | WP_001211967.1 | AI-2E family transporter | - |
| C3F40_RS14570 () | 2708543..2710327 | + | 1785 | WP_001217015.1 | diguanylate cyclase | - |
| C3F40_RS14575 () | 2710340..2710744 | - | 405 | WP_000334957.1 | Regulatory protein SoxS | VF |
| C3F40_RS14580 () | 2710868..2711512 | - | 645 | WP_001547746.1 | HTH-type transcriptional regulator AcrR | VF |
| C3F40_RS14585 () | 2711787..2712484 | - | 698 | Protein_2688 | IS1 family transposase IS1R | Transposase |
| C3F40_RS14595 () | 2712599..2712835 | + | 237 | WP_001144031.1 | hypothetical protein | - |
| C3F40_RS14600 () | 2712835..2713278 | + | 444 | WP_001547764.1 | phage transcriptional regulator | - |
| C3F40_RS14605 () | 2713301..2713768 | + | 468 | WP_001547765.1 | hypothetical protein | - |
| C3F40_RS14610 () | 2713845..2714084 | + | 240 | WP_000194654.1 | DUF905 domain-containing protein | - |
| C3F40_RS14615 () | 2714182..2714640 | + | 459 | WP_001548150.1 | antirestriction protein | - |
| C3F40_RS14620 () | 2714656..2715132 | + | 477 | WP_000811693.1 | RadC family protein | - |
| C3F40_RS14625 () | 2715141..2715362 | + | 222 | WP_000691994.1 | DUF987 domain-containing protein | - |
| C3F40_RS14630 () | 2715381..2715707 | + | 327 | WP_001548930.1 | type IV toxin-antitoxin system antitoxin YafW | Antitoxin Detail |
| C3F40_RS14635 () | 2715797..2716174 | + | 378 | WP_000854726.1 | TA system toxin CbtA family protein | Toxin Detail |
| C3F40_RS14640 () | 2716171..2716659 | + | 489 | WP_001547769.1 | hypothetical protein | - |
| C3F40_RS14645 () | 2716671..2716868 | + | 198 | WP_000839269.1 | DUF957 domain-containing protein | - |
| C3F40_RS14650 () | 2716953..2717795 | + | 843 | WP_001547770.1 | DUF4942 domain-containing protein | - |
| C3F40_RS14660 () | 2718544..2720082 | + | 1539 | WP_001187177.1 | lysine decarboxylation/transport transcriptional activator CadC | - |
| C3F40_RS14670 () | 2720448..2721782 | + | 1335 | WP_000092909.1 | cadaverine/lysine antiporter | - |
| C3F40_RS14675 () | 2721862..2724009 | + | 2148 | WP_001295383.1 | lysine decarboxylase CadA | - |
| C3F40_RS14680 () | 2724068..2725525 | + | 1458 | WP_000856829.1 | dipeptide/tripeptide permease DtpC | - |
| C3F40_RS14685 () | 2725762..2727279 | + | 1518 | WP_001295074.1 | lysine--tRNA ligase | - |
| C3F40_RS14690 () | 2727398..2727571 | - | 174 | WP_001173343.1 | type V toxin-antitoxin system toxin GhoT | Toxin Detail |
| C3F40_RS14695 () | 2727599..2727895 | - | 297 | WP_001425728.1 | type V toxin-antitoxin system endoribonuclease antitoxin GhoS | Antitoxin Detail |
| C3F40_RS14705 () | 2728122..2728394 | - | 273 | WP_000405647.1 | N-acetyltransferase | - |
| C3F40_RS14710 () | 2728406..2728636 | - | 231 | WP_000371700.1 | (4Fe-4S)-binding protein | - |
| C3F40_RS14715 () | 2728817..2730448 | + | 1632 | WP_001216486.1 | sensor histidine kinase | - |
| C3F40_RS14720 () | 2730445..2731164 | + | 720 | WP_000611288.1 | two-component system response regulator DcuR | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|