MGE detailed information
MGE type: Prophage MGE length: 52854 bp
Accession: NZ_CP026353 Location: 1380821..1433674 Organism: Escherichia coli strain 4A Replicon: chromosome
Accession: NZ_CP026353 Location: 1380821..1433674 Organism: Escherichia coli strain 4A Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| C2R10_RS07255 () | 1376034..1376822 | + | 789 | WP_000690229.1 | sugar phosphate isomerase/epimerase | - |
| C2R10_RS07260 () | 1376832..1377887 | + | 1056 | WP_001395397.1 | Gfo/Idh/MocA family oxidoreductase | - |
| C2R10_RS07265 () | 1377884..1380151 | + | 2268 | WP_000198036.1 | kojibiose phosphorylase | - |
| C2R10_RS07270 () | 1380148..1380807 | + | 660 | WP_000775794.1 | beta-phosphoglucomutase | - |
| C2R10_RS07275 () | 1380821..1381902 | + | 1082 | Protein_1321 | hypothetical protein | VF |
| C2R10_RS07280 () | 1381947..1382852 | + | 906 | WP_000735257.1 | monomeric porin OmpG | - |
| C2R10_RS07285 () | 1382963..1383961 | - | 999 | WP_000075375.1 | LacI family transcriptional regulator | - |
| C2R10_RS07290 () | 1384117..1385514 | + | 1398 | WP_000825775.1 | YcjX family protein | - |
| C2R10_RS07295 () | 1385511..1386572 | + | 1062 | WP_000138728.1 | YcjF family protein | - |
| C2R10_RS07300 () | 1386720..1388261 | + | 1542 | WP_001300658.1 | hypothetical protein | VF |
| C2R10_RS07305 () | 1388305..1388811 | - | 507 | WP_000084387.1 | thiol peroxidase | - |
| C2R10_RS07310 () | 1388930..1389895 | + | 966 | WP_001261211.1 | L-Ala-D/L-Glu epimerase | - |
| C2R10_RS07315 () | 1389870..1390598 | - | 729 | WP_000219122.1 | murein tripeptide amidase MpaA | - |
| C2R10_RS07320 () | 1390725..1390862 | - | 138 | Protein_1330 | NAD-dependent dehydratase | - |
| C2R10_RS07325 () | 1390933..1391853 | - | 921 | WP_001300523.1 | alpha/beta hydrolase | - |
| C2R10_RS07330 () | 1391991..1392890 | + | 900 | WP_000817708.1 | hypothetical protein | VF |
| C2R10_RS07335 () | 1393227..1394840 | + | 1614 | WP_000683020.1 | murein tripeptide ABC transporter substrate-binding protein MppA | - |
| C2R10_RS07340 () | 1394891..1395922 | - | 1032 | WP_000559900.1 | low conductance mechanosensitive channel YnaI | - |
| C2R10_RS07345 () | 1396112..1397092 | + | 981 | WP_000019403.1 | IS5 family transposase IS5D | Transposase |
| C2R10_RS07350 () | 1397365..1397622 | + | 258 | WP_000605090.1 | DUF2534 family protein | - |
| C2R10_RS07355 () | 1397672..1398622 | - | 951 | WP_001262123.1 | universal stress protein UspE | - |
| C2R10_RS07360 () | 1398774..1399526 | - | 753 | WP_000611911.1 | fumarate/nitrate reduction transcriptional regulator Fnr | - |
| C2R10_RS07365 () | 1399721..1400236 | - | 516 | WP_000945011.1 | methylated-DNA--[protein]-cysteine S-methyltransferase | - |
| C2R10_RS07370 () | 1400247..1401773 | - | 1527 | WP_000062973.1 | p-aminobenzoyl-glutamate transporter | - |
| C2R10_RS07380 () | 1401810..1403255 | - | 1446 | WP_001156451.1 | p-aminobenzoyl-glutamate hydrolase subunit AbgB | - |
| C2R10_RS07385 () | 1403255..1404565 | - | 1311 | WP_000444929.1 | p-aminobenzoyl-glutamate hydrolase subunit AbgA | - |
| C2R10_RS07390 () | 1404741..1405649 | + | 909 | WP_000885458.1 | LysR family transcriptional regulator | - |
| C2R10_RS07400 () | 1405979..1406542 | + | 564 | WP_001046829.1 | DNA endonuclease SmrA | - |
| C2R10_RS07405 () | 1406563..1407795 | - | 1233 | WP_000628058.1 | diguanylate cyclase DgcM | - |
| C2R10_RS24425 () | 1407989..1408036 | + | 48 | WP_211180494.1 | protein YnaN | - |
| C2R10_RS07410 () | 1408050..1409033 | + | 984 | WP_000387388.1 | zinc transporter ZntB | - |
| C2R10_RS07420 () | 1409511..1410884 | + | 1374 | WP_000123737.1 | ATP-dependent RNA helicase DbpA | - |
| C2R10_RS07425 () | 1411013..1411948 | - | 936 | WP_001157406.1 | tRNA 2-thiocytidine(32) synthetase TtcA | - |
| C2R10_RS07430 () | 1412000..1413235 | - | 1236 | WP_000040852.1 | hypothetical protein ; Integrase | Integrase |
| C2R10_RS07435 () | 1413237..1413452 | - | 216 | WP_000079604.1 | excisionase XisR | - |
| C2R10_RS07440 () | 1413531..1413740 | - | 210 | WP_000276809.1 | double-strand break reduction protein RcbA | - |
| - () | 1413556..1413734 | + | 179 | NuclAT_0 | - | Antitoxin Detail |
| - () | 1413556..1413734 | + | 179 | NuclAT_0 | - | Antitoxin Detail |
| - () | 1413556..1413734 | + | 179 | NuclAT_0 | - | Antitoxin Detail |
| - () | 1413556..1413734 | + | 179 | NuclAT_0 | - | Antitoxin Detail |
| C2R10_RS07445 () | 1413733..1413927 | - | 195 | WP_001317028.1 | type I toxin-antitoxin system endodeoxyribonuclease toxin RalR | Toxin Detail |
| C2R10_RS07450 () | 1413984..1414793 | - | 810 | WP_000166319.1 | recombination protein RecT | - |
| C2R10_RS07455 () | 1414786..1417386 | - | 2601 | WP_000105143.1 | exodeoxyribonuclease VIII | - |
| C2R10_RS07460 () | 1417488..1417763 | - | 276 | WP_000632297.1 | protein RacC | - |
| C2R10_RS07465 () | 1417838..1418008 | - | 171 | WP_001352098.1 | conserved protein, Rac prophage | - |
| C2R10_RS07470 () | 1418008..1418229 | - | 222 | WP_000560225.1 | killing protein KilR | - |
| C2R10_RS07480 () | 1418671..1419159 | + | 489 | WP_001312793.1 | superinfection exclusion protein B | - |
| C2R10_RS07485 () | 1419156..1419311 | - | 156 | WP_001169151.1 | YdaF family protein | - |
| C2R10_RS07495 () | 1419765..1420241 | - | 477 | WP_000948459.1 | DNA-binding transcriptional repressor RacR | - |
| C2R10_RS07500 () | 1420365..1420661 | + | 297 | WP_000712069.1 | toxin YdaS | - |
| C2R10_RS07505 () | 1420684..1421106 | + | 423 | WP_000693797.1 | phage protein | - |
| C2R10_RS07510 () | 1421119..1421976 | + | 858 | WP_000899748.1 | DUF1376 domain-containing protein | - |
| C2R10_RS07515 () | 1421983..1422729 | + | 747 | WP_000788970.1 | ATP-binding protein | - |
| C2R10_RS07520 () | 1422752..1423204 | + | 453 | Protein_1366 | DUF1627 domain-containing protein | - |
| C2R10_RS07525 () | 1423400..1423585 | + | 186 | WP_001228696.1 | prophage lysis lipoprotein RzoD | - |
| C2R10_RS07530 () | 1423782..1425239 | + | 1458 | WP_001097895.1 | Trk system potassium transporter TrkG | - |
| C2R10_RS07540 () | 1425377..1425640 | + | 264 | WP_001350510.1 | ParB/Srx family N-terminal domain-containing protein | - |
| C2R10_RS07545 () | 1425621..1425980 | + | 360 | WP_000091628.1 | hypothetical protein | - |
| C2R10_RS07555 () | 1426454..1427386 | + | 933 | Protein_1371 | phage tail length tape measure family protein | - |
| C2R10_RS07560 () | 1427389..1427604 | + | 216 | Protein_1372 | Ail/Lom family outer membrane beta-barrel protein | - |
| C2R10_RS07570 () | 1427746..1428726 | - | 981 | WP_000019448.1 | IS5 family transposase ISKpn26 | Transposase |
| C2R10_RS07575 () | 1428796..1428984 | + | 189 | Protein_1374 | Ail/Lom family outer membrane beta-barrel protein | - |
| C2R10_RS07580 () | 1429049..1432411 | + | 3363 | WP_000279097.1 | prophage tail fiber N-terminal domain-containing protein | - |
| C2R10_RS07585 () | 1432411..1432986 | + | 576 | WP_001698950.1 | tail fiber assembly protein | - |
| C2R10_RS07590 () | 1433084..1433674 | - | 591 | WP_000086527.1 | Tn3 family transposase TnpR_ISSba14 | Transposase |
| C2R10_RS07595 () | 1433991..1434224 | - | 234 | WP_000836770.1 | cold shock protein YdfK | - |
| C2R10_RS24135 () | 1434293..1434406 | - | 114 | WP_120795384.1 | hypothetical protein | - |
| C2R10_RS07600 () | 1435185..1435619 | - | 435 | WP_001300461.1 | universal stress protein UspF | - |
| C2R10_RS07605 () | 1435760..1436893 | - | 1134 | WP_000837921.1 | porin OmpN | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|