MGE detailed information
MGE type: Integrative_Conjugative_Elements MGE length: 111951 bp
Accession: NZ_CP026269 Location: 1312281..1424231 Organism: Klebsiella oxytoca strain KONIH4 Replicon: chromosome
Accession: NZ_CP026269 Location: 1312281..1424231 Organism: Klebsiella oxytoca strain KONIH4 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| C2U44_RS06580 () | 1308477..1308992 | + | 516 | WP_004104795.1 | S-ribosylhomocysteine lyase | - |
| C2U44_RS06585 () | 1309047..1309814 | + | 768 | WP_042945899.1 | helix-turn-helix transcriptional regulator | - |
| C2U44_RS06590 () | 1309793..1311469 | - | 1677 | WP_042945897.1 | 2-isopropylmalate synthase | - |
| C2U44_RS06595 () | 1311614..1313152 | - | 1539 | WP_004123984.1 | multidrug efflux MFS transporter permease subunit EmrB | - |
| C2U44_RS06600 () | 1313168..1314340 | - | 1173 | WP_014839295.1 | Right origin-binding protein | VF |
| C2U44_RS06605 () | 1314473..1315003 | - | 531 | WP_004104785.1 | Fatty acyl-CoA reductase | VF |
| C2U44_RS06610 () | 1315095..1315430 | - | 336 | WP_009652550.1 | L-valine transporter subunit YgaH | - |
| C2U44_RS06615 () | 1315420..1316166 | - | 747 | WP_014226501.1 | AzlC family ABC transporter permease | - |
| C2U44_RS06620 () | 1316445..1317440 | - | 996 | WP_014839294.1 | glycine betaine/L-proline ABC transporter substrate-binding protein ProX | - |
| C2U44_RS06625 () | 1317503..1318567 | - | 1065 | WP_004853456.1 | glycine betaine/L-proline ABC transporter permease ProW | - |
| C2U44_RS06630 () | 1318560..1319762 | - | 1203 | WP_038424869.1 | hypothetical protein | VF |
| C2U44_RS06635 () | 1320108..1321070 | - | 963 | WP_014226498.1 | class 1b ribonucleoside-diphosphate reductase subunit beta | - |
| C2U44_RS06640 () | 1321081..1323225 | - | 2145 | WP_042945896.1 | class 1b ribonucleoside-diphosphate reductase subunit alpha | - |
| C2U44_RS06645 () | 1323198..1323608 | - | 411 | WP_004104769.1 | class Ib ribonucleoside-diphosphate reductase assembly flavoprotein NrdI | - |
| C2U44_RS06650 () | 1323605..1323850 | - | 246 | WP_004853449.1 | glutaredoxin-like protein NrdH | - |
| C2U44_RS06655 () | 1324034..1324465 | - | 432 | WP_004853446.1 | carboxymuconolactone decarboxylase family protein | - |
| C2U44_RS06660 () | 1324553..1325911 | + | 1359 | WP_042945894.1 | PLP-dependent aminotransferase family protein | - |
| C2U44_RS06665 () | 1325975..1326301 | - | 327 | WP_004123945.1 | DUF883 family protein | - |
| C2U44_RS06670 () | 1326451..1326801 | + | 351 | WP_004123942.1 | DUF2002 family protein | - |
| C2U44_RS06675 () | 1326843..1327292 | - | 450 | WP_014839290.1 | L-alanine exporter AlaE | - |
| C2U44_RS06685 () | 1327998..1328399 | + | 402 | WP_042945891.1 | DNA-binding protein StpA | - |
| C2U44_RS06690 () | 1328446..1328625 | - | 180 | WP_042945889.1 | hypothetical protein | - |
| C2U44_RS06695 () | 1328716..1329237 | - | 522 | WP_014226492.1 | rhodanese family protein | - |
| C2U44_RS06700 () | 1329247..1329546 | - | 300 | WP_014226491.1 | metalloregulator ArsR/SmtB family transcription factor | - |
| C2U44_RS06705 () | 1329704..1331491 | - | 1788 | WP_042945888.1 | Outer membrane protein Omp38 | VF |
| C2U44_RS06710 () | 1331741..1333261 | + | 1521 | WP_004853428.1 | aldehyde dehydrogenase | - |
| C2U44_RS06720 () | 1333926..1334522 | + | 597 | WP_014226488.1 | putative oxidoreductase EphD | VF |
| C2U44_RS06725 () | 1334683..1335342 | + | 660 | WP_032694785.1 | Phospho-2-dehydro-3-deoxyheptonate aldolase, Tyr-sensitive | VF |
| C2U44_RS06730 () | 1335371..1336990 | + | 1620 | Protein_1268 | T-protein | VF |
| C2U44_RS06735 () | 1336986..1337204 | + | 219 | Protein_1269 | antibiotic acetyltransferase | - |
| C2U44_RS06740 () | 1337240..1338013 | + | 774 | WP_042945884.1 | transporter substrate-binding domain-containing protein | - |
| C2U44_RS06745 () | 1338053..1338973 | - | 921 | WP_042945882.1 | LysR family transcriptional regulator | - |
| C2U44_RS06750 () | 1339119..1339895 | + | 777 | WP_042945880.1 | SDR family oxidoreductase | - |
| C2U44_RS06755 () | 1339959..1341152 | + | 1194 | WP_014839275.1 | MFS transporter | - |
| C2U44_RS06760 () | 1341558..1342952 | + | 1395 | WP_042945878.1 | cytochrome-c peroxidase | - |
| C2U44_RS06765 () | 1342960..1343601 | + | 642 | WP_042946246.1 | Chaperone protein ClpB | VF |
| C2U44_RS06770 () | 1343601..1344257 | + | 657 | WP_103433511.1 | Alpha-ketoglutarate permease | VF |
| C2U44_RS06775 () | 1344355..1345092 | + | 738 | WP_025107308.1 | Putative O-methyltransferase | VF |
| C2U44_RS06780 () | 1345089..1345292 | + | 204 | WP_014839269.1 | heme exporter protein CcmD | - |
| C2U44_RS06785 () | 1345289..1345768 | + | 480 | WP_014839268.1 | Protein lysine acetyltransferase Pat | VF |
| C2U44_RS06790 () | 1345765..1347702 | + | 1938 | WP_032694791.1 | hypothetical protein | VF |
| C2U44_RS06795 () | 1347699..1348256 | + | 558 | WP_032694792.1 | thiol:disulfide interchange protein DsbE | - |
| C2U44_RS06800 () | 1348253..1349308 | + | 1056 | WP_032694793.1 | cytochrome c-type biogenesis protein CcmH | - |
| C2U44_RS06805 () | 1349305..1350237 | - | 933 | WP_014839264.1 | glyoxylate/hydroxypyruvate reductase A | - |
| C2U44_RS06810 () | 1350243..1350971 | - | 729 | WP_004853394.1 | class II aldolase/adducin family protein | - |
| C2U44_RS06815 () | 1350972..1352492 | - | 1521 | WP_042945875.1 | ATP-dependent RNA helicase SrmB | VF |
| C2U44_RS06820 () | 1352517..1353320 | - | 804 | WP_025107316.1 | ABC transporter substrate-binding protein | - |
| C2U44_RS06825 () | 1353330..1354406 | - | 1077 | WP_009652534.1 | isopenicillin N synthase family oxygenase | - |
| C2U44_RS06830 () | 1354419..1355267 | - | 849 | WP_042945873.1 | TIM barrel protein | - |
| C2U44_RS06835 () | 1355278..1356228 | - | 951 | WP_014839259.1 | agmatinase | - |
| C2U44_RS06840 () | 1356345..1357256 | + | 912 | WP_004135102.1 | LysR family transcriptional regulator | - |
| C2U44_RS06845 () | 1357552..1357956 | + | 405 | WP_042945872.1 | hypothetical protein | - |
| C2U44_RS06850 () | 1357953..1359716 | + | 1764 | WP_042945870.1 | hypothetical protein | - |
| C2U44_RS06855 () | 1359878..1359967 | - | 90 | Protein_1293 | MurR/RpiR family transcriptional regulator | - |
| C2U44_RS06860 () | 1360092..1360721 | + | 630 | WP_032694797.1 | acid-sensing system DNA-binding response regulator EvgA | - |
| C2U44_RS06865 () | 1360724..1363903 | + | 3180 | WP_032694798.1 | Ribonuclease 3 | VF |
| C2U44_RS06870 () | 1364360..1364878 | + | 519 | WP_032694799.1 | GTPase Era | VF |
| C2U44_RS06875 () | 1364981..1365499 | + | 519 | WP_032694800.1 | DNA repair protein RecO | VF |
| C2U44_RS06880 () | 1365546..1366223 | + | 678 | WP_032694801.1 | Pyridoxine 5'-phosphate synthase | VF |
| C2U44_RS06885 () | 1366235..1368736 | + | 2502 | WP_032694802.1 | Holo-[acyl-carrier-protein] synthase | VF |
| C2U44_RS06890 () | 1368754..1369767 | + | 1014 | WP_032694803.1 | fimbrial protein | - |
| C2U44_RS35455 () | 1370735..1370821 | + | 87 | Protein_1301 | HTH-type transcriptional regulator MurR | VF |
| C2U44_RS06895 () | 1370939..1372513 | + | 1575 | WP_032720459.1 | Phosphatidylglycerophosphatase C | VF |
| C2U44_RS06900 () | 1372614..1373093 | + | 480 | WP_032720465.1 | hypothetical protein | - |
| C2U44_RS06905 () | 1373855..1374835 | - | 981 | WP_000019441.1 | IS5 family transposase ISKpn26 | Transposase |
| C2U44_RS06915 () | 1375677..1376783 | + | 1107 | WP_032931761.1 | hypothetical protein | - |
| C2U44_RS06925 () | 1377240..1379219 | - | 1980 | WP_016157240.1 | hypothetical protein | - |
| C2U44_RS06930 () | 1379216..1379722 | - | 507 | WP_032931759.1 | hypothetical protein | - |
| C2U44_RS06935 () | 1379719..1380927 | - | 1209 | WP_042945865.1 | hypothetical protein | - |
| C2U44_RS06940 () | 1381399..1382343 | + | 945 | WP_042945864.1 | DUF1738 domain-containing protein | - |
| C2U44_RS06945 () | 1382666..1382902 | + | 237 | WP_016157235.1 | type II toxin-antitoxin system CcdA family antitoxin | Antitoxin Detail |
| C2U44_RS06950 () | 1382905..1383219 | + | 315 | WP_016157234.1 | CcdB family protein | Toxin Detail |
| C2U44_RS06955 () | 1383216..1383968 | - | 753 | WP_016157233.1 | hypothetical protein | - |
| C2U44_RS06960 () | 1383977..1385713 | - | 1737 | WP_042945862.1 | type IV secretory system conjugative DNA transfer family protein | - |
| C2U44_RS06975 () | 1386490..1386795 | - | 306 | WP_016157231.1 | hypothetical protein | - |
| C2U44_RS35095 () | 1386842..1387072 | - | 231 | Protein_1315 | kikA from plasmid origin | - |
| C2U44_RS06985 () | 1387222..1388202 | - | 981 | WP_016947617.1 | IS5 family transposase ISKpn26 | Transposase |
| C2U44_RS06995 () | 1388393..1388791 | - | 399 | WP_016157229.1 | cag pathogenicity island Cag12 family protein | - |
| C2U44_RS07000 () | 1388788..1389813 | - | 1026 | WP_016157228.1 | putative protein YphB | VF |
| C2U44_RS07005 () | 1389803..1391056 | - | 1254 | WP_016157227.1 | putative 3-phenylpropionic acid transporter | VF |
| C2U44_RS07010 () | 1391076..1391978 | - | 903 | WP_016157226.1 | hypothetical protein | VF |
| C2U44_RS07015 () | 1391978..1392661 | - | 684 | WP_016157225.1 | hypothetical protein | VF |
| C2U44_RS35460 () | 1392654..1392791 | - | 138 | WP_016157224.1 | hypothetical protein | - |
| C2U44_RS07020 () | 1392884..1393948 | - | 1065 | WP_016157223.1 | type IV secretion system protein | - |
| C2U44_RS07025 () | 1393959..1394186 | - | 228 | WP_016157222.1 | EexN family lipoprotein | - |
| C2U44_RS07030 () | 1394198..1394902 | - | 705 | WP_016157221.1 | type IV secretion system protein | - |
| C2U44_RS07035 () | 1394923..1397667 | - | 2745 | WP_016157220.1 | HTH-type transcriptional regulator IscR | VF |
| C2U44_RS07040 () | 1397678..1397971 | - | 294 | WP_032931998.1 | Cysteine desulfurase IscS | VF |
| C2U44_RS07045 () | 1397971..1398681 | - | 711 | WP_016157218.1 | Iron-sulfur cluster assembly scaffold protein IscU | VF |
| C2U44_RS07050 () | 1398752..1398985 | - | 234 | WP_016157217.1 | hypothetical protein | - |
| C2U44_RS07055 () | 1399380..1399589 | - | 210 | WP_016157216.1 | TraR/DksA family transcriptional regulator | - |
| C2U44_RS07060 () | 1399579..1400163 | - | 585 | WP_016157215.1 | DUF2857 domain-containing protein | - |
| C2U44_RS07065 () | 1400287..1400472 | - | 186 | WP_016157214.1 | AlpA family transcriptional regulator | - |
| C2U44_RS07070 () | 1400659..1400844 | - | 186 | WP_016157214.1 | AlpA family transcriptional regulator | - |
| C2U44_RS07075 () | 1400985..1401911 | - | 927 | WP_016157213.1 | hypothetical protein | - |
| C2U44_RS07080 () | 1402262..1405333 | - | 3072 | WP_016157212.1 | efflux RND transporter permease subunit | - |
| C2U44_RS07085 () | 1405330..1406421 | - | 1092 | WP_016157211.1 | efflux RND transporter periplasmic adaptor subunit | - |
| C2U44_RS07090 () | 1406568..1407503 | - | 936 | WP_158650800.1 | MipA/OmpV family protein | - |
| C2U44_RS07095 () | 1407529..1408509 | + | 981 | WP_016947617.1 | IS5 family transposase ISKpn26 | Transposase |
| C2U44_RS07105 () | 1408734..1410182 | + | 1449 | WP_077255282.1 | sensor histidine kinase | - |
| C2U44_RS07110 () | 1410179..1410838 | + | 660 | WP_016157208.1 | response regulator transcription factor | - |
| C2U44_RS35100 () | 1410851..1411017 | + | 167 | Protein_1341 | IS66 family transposase zinc-finger binding domain-containing protein | - |
| C2U44_RS07115 () | 1411240..1412487 | - | 1248 | WP_032931751.1 | Nucleoside diphosphate kinase ; Integrase | Integrase |
| C2U44_RS07120 () | 1412766..1413785 | - | 1020 | WP_016157206.1 | SAVED domain-containing protein | - |
| C2U44_RS07125 () | 1413836..1414303 | - | 468 | WP_196808776.1 | Mov34/MPN/PAD-1 family protein | - |
| C2U44_RS07130 () | 1414290..1416008 | - | 1719 | WP_016157204.1 | ThiF family adenylyltransferase | - |
| C2U44_RS07135 () | 1416005..1417057 | - | 1053 | Protein_1346 | nucleotidyltransferase | - |
| C2U44_RS07140 () | 1417121..1418271 | + | 1151 | WP_087855188.1 | IS3 family transposase ISEal1 | Transposase |
| C2U44_RS07150 () | 1418824..1419426 | - | 603 | WP_016157202.1 | hypothetical protein | - |
| C2U44_RS07155 () | 1419423..1419860 | - | 438 | WP_071889451.1 | diadenylate cyclase | - |
| C2U44_RS07160 () | 1420681..1421241 | + | 561 | WP_016157201.1 | 3'-5' exonuclease | - |
| C2U44_RS07165 () | 1421250..1421819 | - | 570 | WP_016157200.1 | Mov34/MPN/PAD-1 family protein | - |
| C2U44_RS35465 () | 1421816..1423495 | - | 1680 | WP_016157199.1 | ThiF family adenylyltransferase | - |
| C2U44_RS07175 () | 1423520..1424794 | - | 1275 | WP_016157198.1 | nucleotidyltransferase | - |
| C2U44_RS07180 () | 1424808..1426397 | - | 1590 | WP_016157197.1 | SAVED domain-containing protein | - |
| C2U44_RS07185 () | 1426679..1427790 | + | 1112 | WP_103433514.1 | IS3 family transposase | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|