MGE detailed information
MGE type: Prophage MGE length: 97985 bp
Accession: NZ_CP026235 Location: 2781637..2879621 Organism: Citrobacter freundii complex sp. CFNIH3 Replicon: chromosome
Accession: NZ_CP026235 Location: 2781637..2879621 Organism: Citrobacter freundii complex sp. CFNIH3 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| C2U38_RS13915 () | 2778495..2779376 | - | 882 | WP_003034964.1 | protease HtpX | - |
| C2U38_RS13920 () | 2779569..2781617 | - | 2049 | WP_103283909.1 | carboxy terminal-processing peptidase | - |
| C2U38_RS13925 () | 2781637..2782323 | - | 687 | WP_003833781.1 | RNA chaperone ProQ | - |
| C2U38_RS13930 () | 2782420..2782917 | - | 498 | WP_016152783.1 | GAF domain-containing protein | - |
| C2U38_RS13935 () | 2783046..2784329 | + | 1284 | WP_103283910.1 | membrane integrity lipid transport subunit YebS | - |
| C2U38_RS13940 () | 2784298..2786931 | + | 2634 | WP_103283911.1 | hypothetical protein | VF |
| C2U38_RS13945 () | 2786907..2788436 | + | 1530 | WP_199773180.1 | 16S rRNA (cytosine(1407)-C(5))-methyltransferase RsmF | - |
| C2U38_RS13950 () | 2788537..2788773 | + | 237 | WP_029139506.1 | DUF1480 family protein | - |
| C2U38_RS13955 () | 2788876..2789067 | + | 192 | WP_016152779.1 | YebW family protein | - |
| C2U38_RS13960 () | 2789068..2789709 | - | 642 | WP_047358581.1 | protein-serine/threonine phosphatase | - |
| C2U38_RS13965 () | 2789787..2791067 | - | 1281 | WP_103283913.1 | hypothetical protein | - |
| C2U38_RS13970 () | 2791720..2792391 | + | 672 | WP_049041258.1 | SOS response-associated peptidase | - |
| C2U38_RS13975 () | 2792384..2793652 | - | 1269 | WP_049041262.1 | Y-family DNA polymerase | - |
| C2U38_RS13980 () | 2793655..2794074 | - | 420 | WP_019078490.1 | translesion error-prone DNA polymerase V autoproteolytic subunit | - |
| C2U38_RS13985 () | 2794152..2794394 | + | 243 | WP_049041271.1 | DinI family protein | - |
| C2U38_RS13990 () | 2794439..2795797 | - | 1359 | WP_049041273.1 | hypothetical protein | - |
| C2U38_RS13995 () | 2795807..2796751 | - | 945 | WP_049041274.1 | hypothetical protein | - |
| C2U38_RS14000 () | 2796751..2799999 | - | 3249 | WP_049041277.1 | host specificity protein J | - |
| C2U38_RS14005 () | 2800054..2800653 | - | 600 | WP_049041279.1 | tail assembly protein | - |
| C2U38_RS14010 () | 2800641..2801372 | - | 732 | WP_049041282.1 | C40 family peptidase | - |
| C2U38_RS14015 () | 2801385..2802158 | - | 774 | WP_049041285.1 | phage minor tail protein L | - |
| C2U38_RS14020 () | 2802167..2802517 | - | 351 | WP_049041287.1 | phage tail protein | - |
| C2U38_RS14025 () | 2802779..2803141 | + | 363 | WP_049041297.1 | hypothetical protein | - |
| C2U38_RS14030 () | 2803187..2803411 | - | 225 | WP_049041291.1 | hypothetical protein | - |
| C2U38_RS14035 () | 2803432..2804007 | + | 576 | WP_049041294.1 | hypothetical protein | - |
| C2U38_RS14040 () | 2804099..2804509 | - | 411 | WP_175330120.1 | hypothetical protein | - |
| C2U38_RS14045 () | 2804572..2804796 | - | 225 | WP_049041295.1 | hypothetical protein | - |
| C2U38_RS14050 () | 2804796..2807927 | - | 3132 | WP_103283914.1 | phage tail tape measure protein | - |
| C2U38_RS14055 () | 2807927..2808214 | - | 288 | WP_035895695.1 | DUF1799 domain-containing protein | - |
| C2U38_RS14060 () | 2808232..2808570 | - | 339 | WP_049040904.1 | hypothetical protein | - |
| C2U38_RS14065 () | 2808611..2809141 | - | 531 | WP_049040902.1 | KilA-N domain-containing protein | - |
| C2U38_RS14070 () | 2809358..2810290 | - | 933 | WP_049040900.1 | immunoglobulin domain-containing protein | - |
| C2U38_RS14075 () | 2810337..2810786 | - | 450 | WP_019076571.1 | DUF4128 domain-containing protein | - |
| C2U38_RS14080 () | 2810776..2811375 | - | 600 | WP_049040897.1 | hypothetical protein | - |
| C2U38_RS14085 () | 2811377..2811730 | - | 354 | WP_049040895.1 | hypothetical protein | - |
| C2U38_RS14090 () | 2811732..2812214 | - | 483 | WP_049040893.1 | hypothetical protein | - |
| C2U38_RS14095 () | 2812217..2812558 | - | 342 | WP_103283915.1 | hypothetical protein | - |
| C2U38_RS14100 () | 2812598..2813737 | - | 1140 | WP_016156686.1 | hypothetical protein | - |
| C2U38_RS14105 () | 2813755..2814507 | - | 753 | WP_049041726.1 | hypothetical protein | - |
| C2U38_RS28495 () | 2814634..2814777 | - | 144 | WP_158655785.1 | hypothetical protein | - |
| C2U38_RS14110 () | 2814780..2815886 | - | 1107 | WP_049041728.1 | phage Mu F like family protein | - |
| C2U38_RS14115 () | 2815888..2817291 | - | 1404 | WP_049041730.1 | DUF4055 domain-containing protein | - |
| C2U38_RS14120 () | 2817296..2818867 | - | 1572 | WP_049041731.1 | terminase | - |
| C2U38_RS14125 () | 2818864..2819514 | - | 651 | WP_049041734.1 | hypothetical protein | - |
| C2U38_RS14130 () | 2819638..2820066 | + | 429 | WP_049041738.1 | hypothetical protein | - |
| C2U38_RS14140 () | 2820576..2820848 | - | 273 | WP_049041743.1 | hypothetical protein | - |
| C2U38_RS14145 () | 2820845..2821387 | - | 543 | WP_049041746.1 | glycoside hydrolase family 108 protein | - |
| C2U38_RS14150 () | 2821387..2821662 | - | 276 | WP_049041753.1 | phage holin family protein | - |
| C2U38_RS14155 () | 2821659..2822057 | - | 399 | WP_049041756.1 | membrane protein | - |
| C2U38_RS14160 () | 2822365..2822694 | - | 330 | WP_049041759.1 | hypothetical protein | - |
| C2U38_RS14165 () | 2823322..2824026 | - | 705 | WP_049041761.1 | antiterminator | - |
| C2U38_RS14170 () | 2824023..2824160 | - | 138 | WP_016156248.1 | YlcG family protein | - |
| C2U38_RS14175 () | 2824157..2824765 | - | 609 | WP_103283916.1 | recombination protein NinG | - |
| C2U38_RS14180 () | 2824768..2824974 | - | 207 | WP_049041776.1 | hypothetical protein | - |
| C2U38_RS14185 () | 2824974..2825573 | - | 600 | WP_049041767.1 | DUF1367 family protein | - |
| C2U38_RS14190 () | 2825679..2825933 | - | 255 | WP_049041769.1 | hypothetical protein | - |
| C2U38_RS14195 () | 2825933..2826190 | - | 258 | WP_049041771.1 | DNA polymerase III subunit theta | - |
| C2U38_RS14200 () | 2826190..2826516 | - | 327 | WP_049041775.1 | hypothetical protein | - |
| C2U38_RS14205 () | 2826610..2827470 | - | 861 | WP_103283917.1 | Lar family restriction alleviation protein | - |
| C2U38_RS14210 () | 2827467..2827886 | - | 420 | WP_049041799.1 | HNH endonuclease | - |
| C2U38_RS14215 () | 2827888..2828184 | - | 297 | WP_053089138.1 | ead/Ea22-like family protein | - |
| C2U38_RS14220 () | 2828181..2828408 | - | 228 | WP_049041802.1 | hypothetical protein | - |
| C2U38_RS14225 () | 2828405..2828950 | - | 546 | WP_049041805.1 | hypothetical protein | - |
| C2U38_RS14230 () | 2828947..2829258 | - | 312 | WP_049041807.1 | hypothetical protein | - |
| C2U38_RS14235 () | 2829277..2830026 | - | 750 | WP_049041809.1 | ATP-binding protein | - |
| C2U38_RS14240 () | 2830029..2830976 | - | 948 | WP_016156235.1 | hypothetical protein | - |
| C2U38_RS14245 () | 2831144..2831683 | - | 540 | WP_049041812.1 | toxin YdaT domain-containing protein | - |
| C2U38_RS14250 () | 2831714..2831941 | - | 228 | WP_016156713.1 | hypothetical protein | - |
| C2U38_RS14255 () | 2832010..2832732 | + | 723 | WP_049041815.1 | helix-turn-helix transcriptional regulator | - |
| C2U38_RS14260 () | 2832900..2833823 | + | 924 | WP_049041817.1 | hypothetical protein | - |
| C2U38_RS14265 () | 2833914..2834294 | + | 381 | WP_049041820.1 | lipoprotein | - |
| C2U38_RS14270 () | 2834326..2834532 | - | 207 | WP_172625561.1 | hypothetical protein | - |
| C2U38_RS14275 () | 2834780..2835049 | + | 270 | WP_016247087.1 | hypothetical protein | - |
| C2U38_RS14280 () | 2835030..2835323 | - | 294 | WP_049041823.1 | hypothetical protein | - |
| C2U38_RS14285 () | 2835503..2835709 | + | 207 | WP_001568763.1 | hypothetical protein | - |
| C2U38_RS28635 () | 2835721..2835882 | + | 162 | WP_049259698.1 | hypothetical protein | - |
| C2U38_RS14290 () | 2836022..2838895 | + | 2874 | WP_049040225.1 | PD-(D/E)XK nuclease-like domain-containing protein | - |
| C2U38_RS14295 () | 2838910..2839950 | + | 1041 | WP_049040226.1 | recombinase RecT | - |
| C2U38_RS14300 () | 2839985..2840329 | + | 345 | WP_049040227.1 | hypothetical protein | - |
| C2U38_RS14305 () | 2840322..2840948 | + | 627 | WP_049040228.1 | morphogenetic protein | - |
| C2U38_RS14310 () | 2840935..2841177 | + | 243 | WP_005121071.1 | DUF4060 family protein | - |
| C2U38_RS14315 () | 2841242..2841514 | + | 273 | WP_049040229.1 | excisionase | - |
| C2U38_RS14320 () | 2841483..2842568 | + | 1086 | WP_049040230.1 | hypothetical protein ; Integrase | Integrase |
| - () | 2842642..2842784 | + | 143 | - | - | Antitoxin Detail |
| - () | 2842646..2842749 | - | 104 | - | - | Toxin Detail |
| C2U38_RS14325 () | 2842905..2843243 | - | 339 | WP_003833793.1 | YebY family protein | - |
| C2U38_RS14330 () | 2843264..2844136 | - | 873 | WP_103283918.1 | copper homeostasis membrane protein CopD | - |
| C2U38_RS14335 () | 2844140..2844514 | - | 375 | WP_103283919.1 | CopC domain-containing protein YobA | - |
| C2U38_RS14340 () | 2844658..2844888 | + | 231 | WP_003034925.1 | DNA polymerase III subunit theta | - |
| C2U38_RS14345 () | 2844995..2845651 | + | 657 | WP_016156222.1 | carbon-nitrogen hydrolase family protein | - |
| C2U38_RS14350 () | 2845675..2846337 | + | 663 | WP_016152773.1 | exodeoxyribonuclease X | - |
| C2U38_RS14355 () | 2846334..2848394 | - | 2061 | WP_181022921.1 | oligopeptidase B | - |
| C2U38_RS14360 () | 2848481..2849140 | - | 660 | WP_016156220.1 | tellurite resistance TerB family protein | - |
| C2U38_RS14365 () | 2849241..2849594 | - | 354 | WP_016152770.1 | hypothetical protein | - |
| C2U38_RS14370 () | 2849716..2850006 | - | 291 | WP_003833810.1 | DNA damage-inducible protein YebG | - |
| C2U38_RS14375 () | 2850139..2851317 | + | 1179 | WP_016156219.1 | formate-dependent phosphoribosylglycinamide formyltransferase | - |
| C2U38_RS14380 () | 2851384..2852025 | - | 642 | WP_016152768.1 | bifunctional 4-hydroxy-2-oxoglutarate aldolase/2-dehydro-3-deoxy-phosphogluconate aldolase | - |
| C2U38_RS14385 () | 2852060..2853871 | - | 1812 | WP_016152767.1 | phosphogluconate dehydratase | - |
| C2U38_RS14390 () | 2854104..2855579 | - | 1476 | WP_003034896.1 | glucose-6-phosphate dehydrogenase | - |
| C2U38_RS14395 () | 2855948..2856817 | + | 870 | WP_019076523.1 | MurR/RpiR family transcriptional regulator | - |
| C2U38_RS14400 () | 2856936..2858378 | + | 1443 | WP_016152765.1 | pyruvate kinase | - |
| C2U38_RS14405 () | 2858423..2859394 | - | 972 | WP_016152764.1 | Lipid A biosynthesis myristoyltransferase | VF |
| C2U38_RS14415 () | 2859514..2860833 | - | 1320 | WP_016152763.1 | murein DD-endopeptidase MepM | - |
| C2U38_RS14420 () | 2860849..2861793 | - | 945 | WP_019076521.1 | zinc ABC transporter substrate-binding protein ZnuA | - |
| C2U38_RS14425 () | 2861872..2862627 | + | 756 | WP_016152761.1 | Vitamin B12 import ATP-binding protein BtuD | VF |
| C2U38_RS14430 () | 2862624..2863409 | + | 786 | WP_016152760.1 | hypothetical protein | VF |
| C2U38_RS14440 () | 2864226..2867654 | - | 3429 | WP_103283921.1 | hypothetical protein | VF |
| C2U38_RS14445 () | 2867651..2868868 | - | 1218 | WP_103283922.1 | autotransporter strand-loop-strand O-heptosyltransferase | - |
| C2U38_RS14450 () | 2868995..2869612 | - | 618 | WP_019076517.1 | LuxR family transcriptional regulator | - |
| C2U38_RS14455 () | 2869609..2870061 | - | 453 | WP_019076516.1 | CaiF/GrlA family transcriptional regulator | - |
| C2U38_RS14460 () | 2870418..2871092 | - | 675 | WP_103283923.1 | Tyrosine recombinase XerD | VF |
| C2U38_RS14465 () | 2871241..2872083 | + | 843 | WP_019076514.1 | HTH-type transcriptional activator RhaR | VF |
| C2U38_RS14470 () | 2872080..2872631 | - | 552 | WP_103283924.1 | Tyrosine recombinase XerC | VF |
| C2U38_RS28640 () | 2872775..2872945 | - | 171 | WP_181022919.1 | hypothetical protein | - |
| C2U38_RS14480 () | 2872944..2873170 | + | 227 | Protein_2730 | 3'-5' exoribonuclease | - |
| C2U38_RS14490 () | 2873555..2874226 | + | 672 | WP_003846709.1 | Regulator of RpoS | VF |
| C2U38_RS14495 () | 2874226..2875689 | + | 1464 | WP_103283925.1 | two-component system sensor histidine kinase PhoQ | - |
| C2U38_RS14500 () | 2875782..2876903 | + | 1122 | WP_016152697.1 | [50S ribosomal protein L16]-arginine 3-hydroxylase | - |
| C2U38_RS14505 () | 2877008..2878234 | - | 1227 | WP_047415361.1 | peptidase T | - |
| C2U38_RS14510 () | 2878485..2879621 | + | 1137 | WP_016152695.1 | Vitamin B12 import ATP-binding protein BtuD | VF |
| C2U38_RS14515 () | 2879605..2880468 | + | 864 | WP_016150058.1 | spermidine/putrescine ABC transporter permease PotB | - |
| C2U38_RS14525 () | 2881301..2881534 | + | 234 | WP_029139493.1 | hypothetical protein | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|