MGE detailed information
MGE type: Prophage MGE length: 78042 bp
Accession: NZ_CP026216 Location: 4205389..4283430 Organism: Citrobacter sp. CFNIH10 Replicon: chromosome
Accession: NZ_CP026216 Location: 4205389..4283430 Organism: Citrobacter sp. CFNIH10 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| C2U53_RS24230 () | 4200829..4202202 | + | 1374 | WP_104446576.1 | MFS transporter | - |
| C2U53_RS24235 () | 4202247..4203128 | - | 882 | WP_042318474.1 | protease HtpX | - |
| C2U53_RS24240 () | 4203321..4205369 | - | 2049 | WP_104446577.1 | carboxy terminal-processing peptidase | - |
| C2U53_RS24245 () | 4205389..4206075 | - | 687 | WP_043000397.1 | RNA chaperone ProQ | - |
| C2U53_RS24250 () | 4206173..4206670 | - | 498 | WP_043000396.1 | GAF domain-containing protein | - |
| C2U53_RS24255 () | 4206801..4208084 | + | 1284 | WP_043000395.1 | membrane integrity lipid transport subunit YebS | - |
| C2U53_RS24260 () | 4208053..4210686 | + | 2634 | WP_104446578.1 | hypothetical protein | VF |
| C2U53_RS24265 () | 4210764..4212203 | + | 1440 | WP_104446918.1 | 16S rRNA (cytosine(1407)-C(5))-methyltransferase RsmF | - |
| C2U53_RS24270 () | 4212318..4212554 | + | 237 | WP_161215572.1 | DUF1480 family protein | - |
| C2U53_RS24275 () | 4212656..4212847 | + | 192 | WP_043000391.1 | YebW family protein | - |
| C2U53_RS24280 () | 4212848..4213510 | - | 663 | WP_043000390.1 | protein-serine/threonine phosphatase | - |
| - () | 4213656..4213803 | + | 148 | - | - | Antitoxin Detail |
| - () | 4213660..4213763 | - | 104 | - | - | Toxin Detail |
| C2U53_RS24285 () | 4213919..4214257 | - | 339 | WP_043000379.1 | YebY family protein | - |
| C2U53_RS24290 () | 4214274..4215146 | - | 873 | WP_104446579.1 | copper homeostasis membrane protein CopD | - |
| C2U53_RS24295 () | 4215149..4215523 | - | 375 | WP_044326804.1 | CopC domain-containing protein YobA | - |
| C2U53_RS24300 () | 4215661..4215891 | + | 231 | WP_042318454.1 | DNA polymerase III subunit theta | - |
| C2U53_RS24305 () | 4216000..4216662 | + | 663 | WP_104446580.1 | carbon-nitrogen hydrolase family protein | - |
| C2U53_RS24310 () | 4216686..4217348 | + | 663 | WP_043000375.1 | exodeoxyribonuclease X | - |
| C2U53_RS24315 () | 4217330..4219405 | - | 2076 | WP_104446581.1 | oligopeptidase B | - |
| C2U53_RS24320 () | 4219494..4220153 | - | 660 | WP_043000373.1 | tellurite resistance TerB family protein | - |
| C2U53_RS24325 () | 4220248..4220601 | - | 354 | WP_043000372.1 | protein YebF | - |
| C2U53_RS24330 () | 4220675..4220965 | - | 291 | WP_043000371.1 | DNA damage-inducible protein YebG | - |
| C2U53_RS24335 () | 4221026..4222246 | - | 1221 | WP_000343760.1 | ISL3 family transposase ISKox3 | Transposase |
| C2U53_RS24340 () | 4222421..4223599 | + | 1179 | WP_104446582.1 | formate-dependent phosphoribosylglycinamide formyltransferase | - |
| C2U53_RS24345 () | 4223705..4224346 | - | 642 | WP_043000369.1 | bifunctional 4-hydroxy-2-oxoglutarate aldolase/2-dehydro-3-deoxy-phosphogluconate aldolase | - |
| C2U53_RS24350 () | 4224382..4226193 | - | 1812 | WP_104446583.1 | phosphogluconate dehydratase | - |
| C2U53_RS24355 () | 4226426..4227901 | - | 1476 | WP_043000367.1 | glucose-6-phosphate dehydrogenase | - |
| C2U53_RS24360 () | 4228232..4229101 | + | 870 | WP_043000366.1 | MurR/RpiR family transcriptional regulator | - |
| C2U53_RS24365 () | 4229349..4230791 | + | 1443 | WP_043000365.1 | pyruvate kinase | - |
| C2U53_RS24370 () | 4230836..4231807 | - | 972 | WP_043000364.1 | Lipid A biosynthesis myristoyltransferase | VF |
| C2U53_RS24375 () | 4231930..4233252 | - | 1323 | WP_043000363.1 | murein DD-endopeptidase MepM | - |
| C2U53_RS24380 () | 4233268..4234212 | - | 945 | WP_043000362.1 | zinc ABC transporter substrate-binding protein ZnuA | - |
| C2U53_RS24385 () | 4234291..4235046 | + | 756 | WP_043000361.1 | Zinc import ATP-binding protein ZnuC | VF |
| C2U53_RS24390 () | 4235043..4235828 | + | 786 | WP_044257629.1 | High-affinity zinc uptake system membrane protein ZnuB | VF |
| C2U53_RS24395 () | 4235915..4236925 | - | 1011 | WP_043000359.1 | Holliday junction branch migration DNA helicase RuvB | - |
| C2U53_RS24400 () | 4236934..4237545 | - | 612 | WP_104446584.1 | Holliday junction branch migration protein RuvA | - |
| C2U53_RS24405 () | 4237623..4238144 | - | 522 | WP_000022509.1 | crossover junction endodeoxyribonuclease RuvC | - |
| C2U53_RS24410 () | 4238179..4238922 | - | 744 | WP_043000357.1 | putative transcriptional regulatory protein YebC | VF |
| C2U53_RS24415 () | 4238951..4239403 | - | 453 | WP_043001901.1 | dihydroneopterin triphosphate diphosphatase | - |
| C2U53_RS24420 () | 4239521..4241293 | - | 1773 | WP_044328622.1 | aspartate--tRNA ligase | - |
| C2U53_RS24430 () | 4241559..4242125 | + | 567 | WP_058588175.1 | hydrolase | - |
| C2U53_RS24435 () | 4242491..4242730 | + | 240 | WP_104446585.1 | DinI family protein | - |
| C2U53_RS24440 () | 4242860..4243450 | - | 591 | WP_172740582.1 | tail fiber assembly protein | - |
| C2U53_RS30020 () | 4243450..4244376 | - | 927 | WP_172740595.1 | tail fiber protein | - |
| C2U53_RS24450 () | 4244386..4245342 | - | 957 | WP_104446586.1 | hypothetical protein | - |
| C2U53_RS24455 () | 4245350..4248061 | - | 2712 | WP_104446587.1 | DUF1983 domain-containing protein | - |
| C2U53_RS24460 () | 4248061..4248459 | - | 399 | WP_104446588.1 | hypothetical protein | - |
| C2U53_RS24465 () | 4248466..4249050 | - | 585 | WP_104446589.1 | hypothetical protein | - |
| C2U53_RS24470 () | 4249050..4249643 | - | 594 | WP_104446590.1 | hypothetical protein | - |
| C2U53_RS24475 () | 4249658..4252987 | - | 3330 | WP_104446591.1 | phage tail tape measure protein | - |
| C2U53_RS24480 () | 4253046..4253459 | - | 414 | WP_104446592.1 | hypothetical protein | - |
| C2U53_RS24485 () | 4253514..4253792 | - | 279 | WP_104446593.1 | DUF4035 domain-containing protein | - |
| C2U53_RS24490 () | 4253816..4254184 | - | 369 | WP_104446594.1 | phage tail assembly chaperone | - |
| C2U53_RS24495 () | 4254195..4254638 | - | 444 | WP_046481431.1 | hypothetical protein | - |
| C2U53_RS24500 () | 4254695..4255042 | - | 348 | WP_104446595.1 | DUF3168 domain-containing protein | - |
| C2U53_RS24505 () | 4255039..4255488 | - | 450 | WP_104446596.1 | HK97 gp10 family phage protein | - |
| C2U53_RS24510 () | 4255485..4255823 | - | 339 | WP_001549110.1 | phage head closure protein | - |
| C2U53_RS24515 () | 4255833..4256159 | - | 327 | WP_045286829.1 | head-tail connector protein | - |
| C2U53_RS24520 () | 4256159..4256383 | - | 225 | WP_053528466.1 | hypothetical protein | - |
| C2U53_RS24525 () | 4256423..4257634 | - | 1212 | WP_063846376.1 | phage major capsid protein | - |
| C2U53_RS24530 () | 4257644..4258492 | - | 849 | WP_104446597.1 | Clp protease ClpP | - |
| C2U53_RS24535 () | 4258506..4259810 | - | 1305 | WP_104446301.1 | phage portal protein | - |
| C2U53_RS24540 () | 4259810..4261546 | - | 1737 | WP_016063095.1 | terminase large subunit | - |
| C2U53_RS24545 () | 4261546..4262019 | - | 474 | WP_104446598.1 | phage terminase small subunit P27 family | - |
| C2U53_RS24555 () | 4262840..4263196 | - | 357 | WP_104446600.1 | HNH endonuclease | - |
| C2U53_RS24560 () | 4263196..4263783 | - | 588 | WP_104446298.1 | hypothetical protein | - |
| C2U53_RS24565 () | 4263768..4265225 | - | 1458 | WP_104446601.1 | glycosyltransferase | - |
| C2U53_RS24570 () | 4265244..4265471 | - | 228 | WP_104446602.1 | hypothetical protein | - |
| C2U53_RS24575 () | 4265940..4266182 | - | 243 | Protein_4026 | Fur-regulated protein | - |
| C2U53_RS24580 () | 4266304..4266639 | - | 336 | WP_104446603.1 | hypothetical protein | - |
| C2U53_RS24585 () | 4266716..4267261 | + | 546 | WP_099433159.1 | hypothetical protein | - |
| C2U53_RS24590 () | 4267309..4267533 | - | 225 | WP_099433160.1 | hypothetical protein | - |
| C2U53_RS24595 () | 4267582..4267998 | - | 417 | WP_099433161.1 | hypothetical protein | - |
| C2U53_RS24600 () | 4268007..4268279 | - | 273 | WP_099433162.1 | hypothetical protein | - |
| C2U53_RS24610 () | 4268871..4269398 | - | 528 | WP_104446605.1 | DUF2514 domain-containing protein | - |
| C2U53_RS24615 () | 4269395..4269844 | - | 450 | WP_058588187.1 | lysozyme | - |
| C2U53_RS24620 () | 4269828..4270151 | - | 324 | WP_058588188.1 | phage holin, lambda family | - |
| C2U53_RS24625 () | 4270372..4270818 | + | 447 | WP_099433523.1 | hypothetical protein | - |
| C2U53_RS24630 () | 4270736..4270993 | - | 258 | WP_099433524.1 | hypothetical protein | - |
| C2U53_RS24635 () | 4271149..4271964 | - | 816 | WP_099433525.1 | antitermination protein | - |
| C2U53_RS24640 () | 4271964..4272329 | - | 366 | WP_099433526.1 | RusA family crossover junction endodeoxyribonuclease | - |
| C2U53_RS24645 () | 4272316..4273698 | - | 1383 | WP_104446606.1 | replicative DNA helicase | - |
| C2U53_RS24650 () | 4273695..4274576 | - | 882 | WP_046481455.1 | ATP-binding protein | - |
| C2U53_RS24655 () | 4274591..4275532 | - | 942 | WP_104446607.1 | helix-turn-helix domain-containing protein | - |
| C2U53_RS24660 () | 4275529..4275825 | - | 297 | WP_032635108.1 | hypothetical protein | - |
| C2U53_RS24665 () | 4275851..4276069 | - | 219 | WP_046481457.1 | helix-turn-helix domain-containing protein | - |
| C2U53_RS24670 () | 4276183..4276890 | + | 708 | WP_046481458.1 | helix-turn-helix transcriptional regulator | - |
| C2U53_RS24675 () | 4277263..4277466 | + | 204 | WP_046481459.1 | hypothetical protein | - |
| C2U53_RS24680 () | 4277463..4277884 | + | 422 | Protein_4046 | hypothetical protein | - |
| C2U53_RS24685 () | 4278072..4278272 | + | 201 | WP_046481461.1 | hypothetical protein | - |
| C2U53_RS24690 () | 4278262..4278618 | + | 357 | WP_104446608.1 | hypothetical protein | - |
| C2U53_RS24695 () | 4278618..4278872 | + | 255 | WP_104446609.1 | hypothetical protein | - |
| C2U53_RS24700 () | 4279062..4279469 | + | 408 | WP_058588201.1 | hypothetical protein | - |
| C2U53_RS24705 () | 4279466..4280044 | + | 579 | WP_058588202.1 | hypothetical protein | - |
| C2U53_RS24710 () | 4280056..4280886 | + | 831 | WP_104446610.1 | DNA-binding protein | - |
| C2U53_RS24715 () | 4280883..4281107 | + | 225 | WP_044257017.1 | hypothetical protein | - |
| C2U53_RS24720 () | 4281208..4281669 | + | 462 | WP_058588204.1 | hypothetical protein | - |
| C2U53_RS30030 () | 4281669..4281815 | + | 147 | WP_172740596.1 | hypothetical protein | - |
| C2U53_RS24725 () | 4281825..4282061 | + | 237 | WP_058588205.1 | excisionase family protein | - |
| C2U53_RS24730 () | 4282117..4283430 | + | 1314 | WP_058588206.1 | Putative defective protein IntQ ; Integrase | Integrase |
| C2U53_RS24735 () | 4283409..4284182 | + | 774 | WP_104446611.1 | DUF72 domain-containing protein | - |
| C2U53_RS24740 () | 4284234..4284629 | + | 396 | WP_042318401.1 | MAPEG family protein | - |
| C2U53_RS24745 () | 4284670..4285413 | + | 744 | WP_104446612.1 | carboxy-S-adenosyl-L-methionine synthase CmoA | - |
| C2U53_RS24750 () | 4285410..4286378 | + | 969 | WP_044257625.1 | tRNA 5-methoxyuridine(34)/uridine 5-oxyacetic acid(34) synthase CmoB | - |
| C2U53_RS24755 () | 4286546..4287292 | - | 747 | WP_104446613.1 | copper homeostasis protein CutC | - |
| C2U53_RS24760 () | 4287295..4287864 | - | 570 | WP_044257624.1 | VOC family protein | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|