MGE detailed information
MGE type: Non-Mobilizable plasmid MGE length: 97800 bp
Accession: NZ_CP026200 Location: 1..97800 Organism: Escherichia coli strain ECONIH6 Replicon: plasmid pECO-6dfa
Accession: NZ_CP026200 Location: 1..97800 Organism: Escherichia coli strain ECONIH6 Replicon: plasmid pECO-6dfa
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| C2U45_RS25090 () | 422..2188 | - | 1767 | Protein_1 | Tn3 family transposase TnpA_ISPa38 | Transposase |
| C2U45_RS25100 () | 2240..2944 | - | 705 | WP_001067855.1 | IS6 family transposase IS26 | Transposase |
| C2U45_RS25105 () | 3191..3664 | - | 474 | WP_004201280.1 | Dihydrofolate reductase type 1 | ARG |
| C2U45_RS25110 () | 3820..4824 | + | 1005 | Protein_4 | IS91 family transposase ISAzo26 | Transposase |
| C2U45_RS25115 () | 4878..5582 | - | 705 | WP_001067855.1 | IS6 family transposase IS26 | Transposase |
| C2U45_RS25125 () | 5643..6461 | + | 819 | Protein_6 | Tn3 family transposase TnpA_TnAs1 | Transposase |
| C2U45_RS25130 () | 6519..6761 | + | 243 | WP_000844627.1 | transposase | - |
| C2U45_RS25135 () | 6793..7443 | - | 651 | WP_000164043.1 | tetracycline resistance transcriptional repressor TetR(A) | - |
| C2U45_RS25140 () | 7549..8748 | + | 1200 | WP_000804064.1 | Tetracycline resistance protein, class C | ARG |
| C2U45_RS25145 () | 8780..9664 | - | 885 | WP_000058717.1 | EamA family transporter | - |
| C2U45_RS25150 () | 9802..10209 | - | 408 | WP_001214976.1 | cysteine hydrolase | - |
| C2U45_RS25155 () | 10198..11949 | + | 1752 | Protein_12 | Tn3 family transposase TnpA_TnAs1 | Transposase |
| C2U45_RS25160 () | 12250..12459 | - | 210 | Protein_13 | transposase | - |
| C2U45_RS26725 () | 12533..12745 | - | 213 | Protein_14 | 3'-5' exonuclease | - |
| C2U45_RS25170 () | 12791..13072 | - | 282 | WP_000969996.1 | type II toxin-antitoxin system RelE/ParE family toxin | Toxin Detail |
| C2U45_RS25175 () | 13069..13338 | - | 270 | WP_021546940.1 | hypothetical protein | Antitoxin Detail |
| C2U45_RS25185 () | 14085..14696 | + | 612 | Protein_17 | IS3 family transposase ISRaq1 | Transposase |
| C2U45_RS25190 () | 14728..14907 | - | 180 | WP_012600012.1 | hypothetical protein | - |
| C2U45_RS25195 () | 15131..15448 | + | 318 | WP_032156934.1 | hypothetical protein | - |
| C2U45_RS25200 () | 15517..16443 | + | 927 | WP_000617209.1 | WYL domain-containing protein | - |
| C2U45_RS25205 () | 16453..17052 | + | 600 | WP_001021938.1 | DUF1819 family protein | - |
| C2U45_RS25210 () | 17049..17633 | + | 585 | WP_000645940.1 | DUF1788 domain-containing protein | - |
| C2U45_RS25215 () | 17652..21329 | + | 3678 | WP_000687847.1 | BREX system P-loop protein BrxC | - |
| C2U45_RS25220 () | 21346..23109 | + | 1764 | WP_021546938.1 | DUF262 domain-containing protein | - |
| C2U45_RS25225 () | 23125..26754 | + | 3630 | WP_021546937.1 | BREX-1 system adenine-specific DNA-methyltransferase PglX | - |
| C2U45_RS25230 () | 26754..29411 | + | 2658 | WP_004011547.1 | BREX-1 system phosphatase PglZ type A | - |
| C2U45_RS25235 () | 29473..31518 | + | 2046 | WP_048659818.1 | protease Lon-related BREX system protein BrxL | - |
| C2U45_RS25240 () | 31626..31904 | - | 279 | Protein_28 | IS3 family transposase | - |
| C2U45_RS25245 () | 32194..33198 | - | 1005 | WP_021546935.1 | IS110 family transposase IS4321R | Transposase |
| C2U45_RS25255 () | 33503..34200 | + | 698 | Protein_30 | IS1 family transposase | - |
| C2U45_RS25260 () | 34325..34759 | - | 435 | Protein_31 | GNAT family N-acetyltransferase | - |
| C2U45_RS25265 () | 34779..35027 | + | 249 | Protein_32 | IS3 family transposase ISEhe3 | Transposase |
| C2U45_RS25270 () | 35076..35780 | - | 705 | WP_001067855.1 | IS6 family transposase IS26 | Transposase |
| C2U45_RS26535 () | 35761..36016 | - | 256 | Protein_34 | IS6 family transposase IS15 | Transposase |
| C2U45_RS25280 () | 36281..37246 | - | 966 | WP_000725192.1 | ParB/RepB/Spo0J family partition protein | - |
| C2U45_RS25285 () | 37243..38448 | - | 1206 | WP_000817632.1 | Plasmid partition protein A | VF |
| C2U45_RS25290 () | 38848..39708 | - | 861 | WP_021546926.1 | replication protein RepA | - |
| C2U45_RS25300 () | 40362..41561 | - | 1200 | WP_000948429.1 | IS91 family transposase ISSbo1 | Transposase |
| C2U45_RS25305 () | 41571..41759 | - | 189 | WP_048230572.1 | hypothetical protein | - |
| C2U45_RS26730 () | 41876..41986 | - | 111 | Protein_40 | peptidase | - |
| C2U45_RS25315 () | 42438..43403 | + | 966 | WP_103216243.1 | DUF1738 domain-containing protein | - |
| C2U45_RS26540 () | 43575..43751 | + | 177 | WP_013438824.1 | hypothetical protein | - |
| C2U45_RS25320 () | 43883..44314 | + | 432 | WP_001776120.1 | hypothetical protein | - |
| C2U45_RS25325 () | 44346..44873 | - | 528 | WP_048659789.1 | Phospholipase D | VF |
| C2U45_RS25330 () | 44866..45612 | - | 747 | WP_000909125.1 | hypothetical protein | - |
| C2U45_RS25335 () | 45627..47534 | - | 1908 | WP_033546593.1 | TraM recognition domain-containing protein | - |
| C2U45_RS25340 () | 48243..48635 | - | 393 | WP_001079960.1 | H-NS histone family protein | - |
| C2U45_RS25345 () | 48632..50833 | - | 2202 | WP_023281073.1 | type IA DNA topoisomerase | - |
| C2U45_RS25350 () | 50830..51138 | - | 309 | WP_000212005.1 | hypothetical protein | - |
| C2U45_RS25355 () | 51114..51449 | - | 336 | WP_000610141.1 | hypothetical protein | - |
| C2U45_RS25360 () | 51476..51793 | - | 318 | WP_000683352.1 | hypothetical protein | - |
| C2U45_RS25365 () | 51884..52285 | - | 402 | WP_000979494.1 | hypothetical protein | - |
| C2U45_RS25370 () | 52272..53321 | - | 1050 | WP_000342114.1 | Type IV secretion system protein VirB11 | VF |
| C2U45_RS25375 () | 53325..54521 | - | 1197 | WP_000980841.1 | Type IV secretion system protein virB10 | VF |
| C2U45_RS25380 () | 54518..55411 | - | 894 | WP_001045307.1 | P-type conjugative transfer protein VirB9 | - |
| C2U45_RS25385 () | 55404..56090 | - | 687 | WP_001293055.1 | type IV secretion system protein | - |
| C2U45_RS26735 () | 56083..56223 | - | 141 | WP_000873539.1 | hypothetical protein | - |
| C2U45_RS25390 () | 56300..57307 | - | 1008 | WP_000014166.1 | type IV secretion system protein | - |
| C2U45_RS25395 () | 57325..57609 | - | 285 | WP_000769859.1 | EexN family lipoprotein | - |
| C2U45_RS25400 () | 57621..58337 | - | 717 | WP_000770034.1 | type IV secretion system protein | - |
| C2U45_RS25405 () | 58356..61106 | - | 2751 | WP_048659795.1 | Type IV secretion system protein virB4 | VF |
| C2U45_RS25410 () | 61116..61415 | - | 300 | WP_000175462.1 | TrbC/VirB2 family protein | - |
| C2U45_RS25415 () | 61426..62088 | - | 663 | WP_000958205.1 | Type IV secretion system protein virB1 | VF |
| C2U45_RS25420 () | 62091..62306 | - | 216 | WP_001112907.1 | hypothetical protein | - |
| C2U45_RS25425 () | 62299..62607 | - | 309 | WP_000062770.1 | hypothetical protein | - |
| C2U45_RS25430 () | 62921..63835 | + | 915 | WP_000891983.1 | response regulator | - |
| C2U45_RS25435 () | 63839..64822 | + | 984 | WP_039267228.1 | hypothetical protein | - |
| C2U45_RS25440 () | 64815..65303 | + | 489 | WP_000238872.1 | molybdopterin-dependent oxidoreductase | - |
| C2U45_RS25445 () | 65300..67018 | + | 1719 | WP_087760816.1 | hybrid sensor histidine kinase/response regulator | - |
| C2U45_RS25450 () | 67291..67563 | + | 273 | Protein_70 | RepA protein | - |
| C2U45_RS25460 () | 67618..68315 | + | 698 | Protein_71 | IS1 family transposase IS1R | Transposase |
| C2U45_RS25465 () | 68332..68586 | - | 255 | Protein_72 | chaperonin | - |
| C2U45_RS25470 () | 68932..69636 | + | 705 | WP_001067852.1 | IS6 family transposase IS26 | Transposase |
| C2U45_RS25480 () | 69691..71241 | + | 1551 | Protein_74 | Tn3 family transposase TnpA_TnAs1 | Transposase |
| C2U45_RS25490 () | 71587..72564 | - | 978 | WP_000600827.1 | IS91 family transposase ISWz1 | Transposase |
| C2U45_RS25495 () | 72890..73587 | - | 698 | Protein_76 | IS1 family transposase IS1R | Transposase |
| C2U45_RS25500 () | 73616..75028 | - | 1413 | WP_103216244.1 | hypothetical protein | - |
| C2U45_RS25510 () | 75645..76922 | - | 1278 | WP_000625667.1 | DUF2254 domain-containing protein | - |
| C2U45_RS25520 () | 76986..78983 | - | 1998 | WP_005032116.1 | choline BCCT transporter BetT | - |
| C2U45_RS25525 () | 79364..79603 | + | 240 | WP_000534857.1 | type II toxin-antitoxin system antitoxin RelB | - |
| C2U45_RS25530 () | 79603..79764 | + | 162 | Protein_81 | type II toxin-antitoxin system mRNA interferase RelE | - |
| C2U45_RS25535 () | 79854..80444 | + | 591 | WP_012477564.1 | plasmid pRiA4b ORF-3 family protein | - |
| C2U45_RS25540 () | 80581..81153 | + | 573 | WP_001493762.1 | Tn3 family transposase TnpR_ISPa40 | Transposase |
| C2U45_RS25545 () | 81190..82581 | + | 1392 | WP_001493761.1 | ISKra4 family transposase ISKpn19 | Transposase |
| C2U45_RS25550 () | 82614..83042 | + | 429 | Protein_85 | Tn3 family transposase TnpR_ISMex22 | Transposase |
| C2U45_RS25555 () | 83361..84017 | - | 657 | WP_001516695.1 | Pentapeptide repeat protein | ARG |
| C2U45_RS25560 () | 84412..85427 | + | 1016 | Protein_87 | IS3 family transposase ISEc36 | Transposase |
| C2U45_RS25565 () | 85470..88265 | - | 2796 | Protein_88 | Tn3 family transposase TnpA_Tn3 | Transposase |
| C2U45_RS25570 () | 88279..88611 | + | 333 | WP_001393253.1 | WbuC family cupin fold metalloprotein | - |
| C2U45_RS25575 () | 88658..89533 | - | 876 | WP_000239590.1 | Beta-lactamase CTX-M-1 | ARG |
| C2U45_RS25580 () | 89789..91051 | - | 1263 | WP_000608644.1 | IS1380 family transposase ISEcp1 | Transposase |
| C2U45_RS25585 () | 91257..91451 | - | 195 | Protein_92 | Tn3 family transposase TnpA_Tn3 | Transposase |
| C2U45_RS25590 () | 91615..92172 | + | 558 | WP_001235713.1 | Tn3 family transposase TnpR_Tn3 | Transposase |
| C2U45_RS25595 () | 92355..93215 | + | 861 | WP_000027057.1 | Beta-lactamase TEM | ARG |
| C2U45_RS25600 () | 93425..93829 | + | 405 | Protein_95 | IS91 family transposase ISPps1 | Transposase |
| C2U45_RS25605 () | 93936..94772 | - | 837 | WP_000480968.1 | hypothetical protein | ARG |
| C2U45_RS25610 () | 94772..95575 | - | 804 | WP_001082319.1 | Aminoglycoside 3'-phosphotransferase | ARG |
| C2U45_RS25615 () | 95636..96451 | - | 816 | WP_001043260.1 | Dihydropteroate synthase | ARG |
| C2U45_RS25625 () | 96781..96957 | + | 177 | WP_000954592.1 | Arm DNA-binding domain-containing protein | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|