MGE detailed information
MGE type: Conjugative plasmid MGE length: 95560 bp
Accession: NZ_CP026158 Location: 1..95560 Organism: Klebsiella pneumoniae strain F93-2 Replicon: plasmid pF93-2_1
Accession: NZ_CP026158 Location: 1..95560 Organism: Klebsiella pneumoniae strain F93-2 Replicon: plasmid pF93-2_1
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| C2M12_RS25260 () | 1..398 | - | 398 | Protein_0 | DUF1380 family protein | - |
| C2M12_RS25265 () | 445..746 | - | 302 | Protein_1 | antirestriction protein | - |
| C2M12_RS26995 () | 1286..2064 | - | 779 | Protein_2 | hypothetical protein | - |
| C2M12_RS25280 () | 2116..2607 | - | 492 | Protein_3 | DUF1380 family protein | - |
| C2M12_RS25285 () | 2567..2788 | - | 222 | WP_001104881.1 | hypothetical protein | - |
| C2M12_RS25290 () | 2789..3473 | - | 685 | Protein_5 | DNA methylase | - |
| C2M12_RS25300 () | 3550..3843 | - | 294 | WP_032146011.1 | hypothetical protein | - |
| C2M12_RS25305 () | 3990..4952 | + | 963 | WP_000959884.1 | plasmid segregation protein ParM | - |
| C2M12_RS25310 () | 4955..5305 | + | 351 | WP_000361389.1 | plasmid partitioning/stability family protein | - |
| C2M12_RS25315 () | 5428..5709 | - | 282 | WP_001333089.1 | hypothetical protein | - |
| C2M12_RS25320 () | 5837..6071 | - | 235 | Protein_10 | type II toxin-antitoxin system RelE/ParE family toxin | - |
| C2M12_RS27000 () | 7520..7585 | - | 66 | Protein_11 | IS1 family transposase | - |
| C2M12_RS25340 () | 7651..8355 | + | 705 | WP_001067858.1 | IS6-like element IS26 family transposase | - |
| C2M12_RS25345 () | 8544..9419 | + | 876 | WP_000239590.1 | class A extended-spectrum beta-lactamase CTX-M-15 | - |
| C2M12_RS25350 () | 9466..9798 | - | 333 | WP_001393253.1 | WbuC family cupin fold metalloprotein | - |
| C2M12_RS25355 () | 9812..12607 | + | 2796 | Protein_15 | Tn3-like element Tn3 family transposase | - |
| C2M12_RS25360 () | 12650..13665 | - | 1016 | Protein_16 | IS3 family transposase | - |
| C2M12_RS25365 () | 14060..14716 | + | 657 | WP_001516695.1 | quinolone resistance pentapeptide repeat protein QnrS1 | - |
| C2M12_RS25370 () | 15035..15463 | - | 429 | Protein_18 | recombinase family protein | - |
| C2M12_RS25375 () | 15496..16887 | - | 1392 | WP_001493761.1 | ISKra4-like element ISKpn19 family transposase | - |
| C2M12_RS25380 () | 16924..17496 | - | 573 | WP_001493762.1 | recombinase family protein | - |
| C2M12_RS25385 () | 17633..18223 | - | 591 | WP_012477564.1 | plasmid pRiA4b ORF-3 family protein | - |
| C2M12_RS25390 () | 18313..18474 | - | 162 | Protein_22 | type II toxin-antitoxin system mRNA interferase RelE | - |
| C2M12_RS25395 () | 18474..18713 | - | 240 | WP_000534857.1 | type II toxin-antitoxin system antitoxin RelB | - |
| C2M12_RS25400 () | 19094..21091 | + | 1998 | WP_005032116.1 | choline BCCT transporter BetT | - |
| C2M12_RS25410 () | 21155..22432 | + | 1278 | WP_000625667.1 | DUF2254 domain-containing protein | - |
| C2M12_RS25420 () | 23049..24479 | + | 1431 | WP_001460374.1 | hypothetical protein | - |
| C2M12_RS25425 () | 24620..25222 | + | 603 | WP_001752951.1 | tyrosine-type recombinase/integrase | - |
| C2M12_RS25430 () | 25319..26128 | - | 810 | WP_000161640.1 | hypothetical protein | - |
| C2M12_RS25435 () | 26474..27178 | + | 705 | WP_001067855.1 | IS6-like element IS26 family transposase | - |
| C2M12_RS25440 () | 27232..28280 | - | 1049 | Protein_30 | IS3 family transposase | - |
| C2M12_RS25445 () | 28372..28914 | - | 543 | WP_002063889.1 | AAA family ATPase | - |
| C2M12_RS25450 () | 28927..29787 | - | 861 | WP_000557452.1 | aminoglycoside N-acetyltransferase AAC(3)-IIe | - |
| C2M12_RS25455 () | 29894..30598 | + | 705 | WP_001067855.1 | IS6-like element IS26 family transposase | - |
| C2M12_RS25465 () | 30720..31625 | + | 906 | WP_000219391.1 | Mph(A) family macrolide 2'-phosphotransferase | - |
| C2M12_RS25470 () | 31622..32860 | + | 1239 | WP_000004159.1 | MFS transporter | - |
| C2M12_RS25475 () | 32860..33444 | + | 585 | WP_001137892.1 | TetR family transcriptional regulator | - |
| C2M12_RS25490 () | 33937..34701 | - | 765 | WP_001389365.1 | IS6-like element IS6100 family transposase | - |
| C2M12_RS26890 () | 34819..34884 | - | 66 | Protein_38 | EAL domain-containing protein | - |
| C2M12_RS25500 () | 34928..35233 | - | 306 | WP_000130000.1 | PadR family transcriptional regulator | - |
| C2M12_RS25505 () | 35244..36449 | - | 1206 | WP_000184001.1 | chromate efflux transporter | - |
| C2M12_RS25510 () | 36605..36808 | - | 204 | WP_000376616.1 | hypothetical protein | - |
| C2M12_RS25520 () | 36936..37775 | - | 840 | WP_000259031.1 | sulfonamide-resistant dihydropteroate synthase Sul1 | - |
| C2M12_RS25525 () | 37769..38116 | - | 348 | WP_000679427.1 | quaternary ammonium compound efflux SMR transporter QacE delta 1 | - |
| C2M12_RS25530 () | 38322..39110 | - | 789 | WP_000503573.1 | ANT(3'')-Ia family aminoglycoside nucleotidyltransferase AadA5 | - |
| C2M12_RS25535 () | 39241..39714 | - | 474 | WP_001389366.1 | trimethoprim-resistant dihydrofolate reductase DfrA17 | - |
| C2M12_RS25540 () | 39872..40501 | + | 630 | Protein_46 | class 1 integron integrase IntI1 | - |
| C2M12_RS25545 () | 40566..41270 | + | 705 | WP_001067855.1 | IS6-like element IS26 family transposase | - |
| C2M12_RS25550 () | 41336..41881 | + | 546 | Protein_48 | Tn3 family transposase | - |
| C2M12_RS25555 () | 41917..42332 | - | 416 | Protein_49 | IS1 family transposase | - |
| C2M12_RS25560 () | 42581..42982 | - | 402 | WP_001398199.1 | type II toxin-antitoxin system toxin endoribonuclease PemK | - |
| C2M12_RS25565 () | 42915..43172 | - | 258 | WP_000557619.1 | type II toxin-antitoxin system antitoxin PemI | - |
| C2M12_RS25570 () | 43265..43918 | - | 654 | WP_052929223.1 | CPBP family intramembrane metalloprotease | - |
| C2M12_RS25580 () | 44857..45714 | - | 858 | WP_000130646.1 | incFII family plasmid replication initiator RepA | - |
| C2M12_RS25585 () | 45707..45781 | - | 75 | WP_001365705.1 | RepA leader peptide Tap | - |
| C2M12_RS25595 () | 46019..46273 | - | 255 | WP_000083830.1 | replication regulatory protein RepA | - |
| C2M12_RS25600 () | 46513..47103 | - | 591 | WP_000766807.1 | DUF2726 domain-containing protein | - |
| C2M12_RS25605 () | 47141..47350 | - | 210 | WP_001298565.1 | hemolysin expression modulator Hha | - |
| C2M12_RS25610 () | 47396..47857 | - | 462 | WP_001233838.1 | thermonuclease family protein | - |
| C2M12_RS25615 () | 48102..48314 | - | 213 | WP_001309245.1 | ANR family transcriptional regulator | - |
| C2M12_RS25620 () | 48443..49003 | - | 561 | WP_000139323.1 | fertility inhibition protein FinO | - |
| C2M12_RS25625 () | 49106..49966 | - | 861 | WP_000704523.1 | alpha/beta hydrolase | - |
| C2M12_RS25630 () | 50025..50771 | - | 747 | WP_000205725.1 | conjugal transfer pilus acetylase TraX | - |
| C2M12_RS25635 () | 50791..56061 | - | 5271 | WP_000948354.1 | conjugative transfer relaxase/helicase TraI | - |
| C2M12_RS25640 () | 56061..58340 | - | 2280 | WP_087760849.1 | type IV conjugative transfer system coupling protein TraD | - |
| C2M12_RS25645 () | 58391..59128 | - | 738 | WP_000199905.1 | hypothetical protein | - |
| C2M12_RS25650 () | 59331..60062 | - | 732 | WP_000782451.1 | complement resistance protein TraT | - |
| C2M12_RS25655 () | 60111..60596 | - | 486 | WP_000605870.1 | hypothetical protein | - |
| C2M12_RS25660 () | 60612..63434 | - | 2823 | WP_001007039.1 | conjugal transfer mating pair stabilization protein TraG | - |
| C2M12_RS25665 () | 63431..64813 | - | 1383 | WP_001309243.1 | conjugal transfer protein TraH | - |
| C2M12_RS25670 () | 64791..65216 | - | 426 | WP_001444237.1 | F-type conjugal transfer protein TrbF | - |
| C2M12_RS25675 () | 65164..65511 | - | 348 | WP_001309242.1 | P-type conjugative transfer protein TrbJ | - |
| C2M12_RS25680 () | 65441..65986 | - | 546 | WP_000059831.1 | type-F conjugative transfer system pilin assembly thiol-disulfide isomerase TrbB | - |
| C2M12_RS25685 () | 65973..66257 | - | 285 | WP_000624194.1 | type-F conjugative transfer system pilin chaperone TraQ | - |
| C2M12_RS25690 () | 66376..66720 | - | 345 | WP_000556796.1 | conjugal transfer protein TrbA | - |
| C2M12_RS25695 () | 66734..67483 | - | 750 | WP_001336806.1 | type-F conjugative transfer system pilin assembly protein TraF | - |
| C2M12_RS25700 () | 67470..67727 | - | 258 | WP_000864353.1 | conjugal transfer protein TrbE | - |
| C2M12_RS25705 () | 67754..69604 | - | 1851 | WP_000821856.1 | type-F conjugative transfer system mating-pair stabilization protein TraN | - |
| C2M12_RS25710 () | 69601..70239 | - | 639 | WP_001080256.1 | type-F conjugative transfer system pilin assembly protein TrbC | - |
| C2M12_RS25715 () | 70248..70553 | - | 306 | WP_000224416.1 | hypothetical protein | - |
| C2M12_RS25720 () | 70583..71575 | - | 993 | WP_000830838.1 | conjugal transfer pilus assembly protein TraU | - |
| C2M12_RS25725 () | 71572..72204 | - | 633 | WP_001203728.1 | type-F conjugative transfer system protein TraW | - |
| C2M12_RS25730 () | 72201..72587 | - | 387 | WP_000214084.1 | type-F conjugative transfer system protein TrbI | - |
| C2M12_RS25735 () | 72584..75214 | - | 2631 | WP_000069777.1 | type IV secretion system protein TraC | - |
| C2M12_RS25740 () | 75340..75687 | - | 348 | WP_000836682.1 | hypothetical protein | - |
| C2M12_RS25745 () | 75715..75933 | - | 219 | WP_000556745.1 | hypothetical protein | - |
| C2M12_RS25750 () | 76013..76489 | - | 477 | WP_000549587.1 | hypothetical protein | - |
| C2M12_RS25755 () | 76482..76703 | - | 222 | WP_001278683.1 | conjugal transfer protein TraR | - |
| C2M12_RS25760 () | 76838..77353 | - | 516 | WP_000809881.1 | type IV conjugative transfer system lipoprotein TraV | - |
| C2M12_RS25765 () | 77350..77718 | - | 369 | WP_001315561.1 | conjugal transfer protein TrbD | - |
| C2M12_RS25770 () | 77657..78244 | - | 588 | WP_001444176.1 | conjugal transfer protein TraP | - |
| C2M12_RS25775 () | 78213..79664 | - | 1452 | WP_000146675.1 | conjugal transfer protein TraB | - |
| C2M12_RS25780 () | 79664..80392 | - | 729 | WP_001230772.1 | type-F conjugative transfer system secretin TraK | - |
| C2M12_RS25785 () | 80379..80945 | - | 567 | WP_000399780.1 | type IV conjugative transfer system protein TraE | - |
| C2M12_RS25790 () | 80967..81278 | - | 312 | WP_000012113.1 | type IV conjugative transfer system protein TraL | - |
| C2M12_RS25795 () | 81293..81652 | - | 360 | WP_001098992.1 | type IV conjugative transfer system pilin TraA | - |
| C2M12_RS25800 () | 81685..81912 | - | 228 | WP_000089263.1 | conjugal transfer relaxosome protein TraY | - |
| C2M12_RS25805 () | 82049..82720 | - | 672 | WP_000283561.1 | conjugal transfer transcriptional regulator TraJ | - |
| C2M12_RS25810 () | 82914..83297 | - | 384 | WP_001354030.1 | relaxosome protein TraM | - |
| C2M12_RS25820 () | 83620..84222 | + | 603 | WP_000243713.1 | transglycosylase SLT domain-containing protein | - |
| C2M12_RS25825 () | 84519..85340 | - | 822 | WP_001234445.1 | DUF945 domain-containing protein | - |
| C2M12_RS25830 () | 85451..85747 | - | 297 | WP_001272251.1 | hypothetical protein | - |
| C2M12_RS27005 () | 86047..86424 | + | 378 | Protein_102 | hypothetical protein | - |
| C2M12_RS26895 () | 86662..86820 | - | 159 | WP_001312861.1 | type I toxin-antitoxin system Hok family toxin | Toxin Detail |
| - () | 86864..87088 | - | 225 | NuclAT_0 | - | Antitoxin Detail |
| - () | 86864..87088 | - | 225 | NuclAT_0 | - | Antitoxin Detail |
| - () | 86864..87088 | - | 225 | NuclAT_0 | - | Antitoxin Detail |
| - () | 86864..87088 | - | 225 | NuclAT_0 | - | Antitoxin Detail |
| C2M12_RS25855 () | 87100..87819 | - | 720 | WP_001276217.1 | plasmid SOS inhibition protein A | - |
| C2M12_RS25860 () | 87816..88250 | - | 435 | WP_000845953.1 | conjugation system SOS inhibitor PsiB | - |
| C2M12_RS25865 () | 88319..90342 | - | 2024 | Protein_106 | ParB/RepB/Spo0J family partition protein | - |
| C2M12_RS25870 () | 90403..90636 | - | 234 | WP_000006003.1 | DUF905 family protein | - |
| C2M12_RS25875 () | 90694..91221 | - | 528 | WP_000290834.1 | single-stranded DNA-binding protein | - |
| C2M12_RS25900 () | 92058..92621 | - | 564 | WP_001298559.1 | class I SAM-dependent methyltransferase | - |
| C2M12_RS25905 () | 92668..94029 | - | 1362 | WP_000170695.1 | DUF3560 domain-containing protein | - |
| C2M12_RS25910 () | 94081..94311 | - | 231 | WP_000218642.1 | hypothetical protein | - |
| C2M12_RS25930 () | 95349..95540 | - | 192 | WP_001027493.1 | hypothetical protein | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|