MGE detailed information
MGE type: Genomic_island MGE length: 9331 bp
Accession: NZ_CP026115 Location: 3853805..3863135 Organism: Pseudomonas putida strain W5 Replicon: chromosome
Accession: NZ_CP026115 Location: 3853805..3863135 Organism: Pseudomonas putida strain W5 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| C2H86_RS17570 () | 3849059..3849736 | - | 678 | WP_159409128.1 | RnfABCDGE type electron transport complex subunit B | - |
| C2H86_RS17575 () | 3849733..3850281 | - | 549 | WP_159409129.1 | electron transporter RnfA | - |
| C2H86_RS17580 () | 3850371..3852410 | - | 2040 | WP_159409130.1 | methionine--tRNA ligase | - |
| C2H86_RS17585 () | 3852567..3853661 | + | 1095 | WP_159409131.1 | iron-sulfur cluster carrier protein ApbC | - |
| C2H86_RS17590 () | 3853805..3854014 | - | 210 | WP_003254922.1 | cold-shock protein | - |
| C2H86_RS17595 () | 3854343..3854909 | + | 567 | WP_003258001.1 | dCTP deaminase | - |
| C2H86_RS17600 () | 3855009..3855236 | + | 228 | WP_159409132.1 | hypothetical protein | - |
| C2H86_RS17605 () | 3855237..3855896 | - | 660 | WP_159409133.1 | ligase-associated DNA damage response endonuclease PdeM | - |
| C2H86_RS17610 () | 3855893..3858343 | - | 2451 | WP_159409134.1 | ligase-associated DNA damage response DEXH box helicase | - |
| C2H86_RS17615 () | 3858412..3859527 | - | 1116 | WP_159409135.1 | succinylglutamate desuccinylase/aspartoacylase family protein | - |
| C2H86_RS17620 () | 3859626..3861284 | - | 1659 | WP_159409136.1 | ATP-dependent DNA ligase | - |
| C2H86_RS17625 () | 3861281..3862297 | - | 1017 | WP_159409137.1 | ligase-associated DNA damage response exonuclease | - |
| C2H86_RS17630 () | 3862507..3862692 | + | 186 | WP_159409138.1 | type II toxin-antitoxin system HicA family toxin | Toxin Detail |
| C2H86_RS17635 () | 3862713..3863135 | + | 423 | WP_159412950.1 | helix-turn-helix domain-containing protein | Antitoxin Detail |
| C2H86_RS17640 () | 3863182..3865623 | - | 2442 | WP_159409139.1 | penicillin acylase family protein | - |
| C2H86_RS17645 () | 3865770..3865970 | - | 201 | WP_023379046.1 | SEC-C domain-containing protein | - |
| C2H86_RS17650 () | 3865978..3866454 | - | 477 | WP_159409140.1 | LEA type 2 family protein | - |
| C2H86_RS17655 () | 3866457..3866933 | - | 477 | WP_159409141.1 | YchJ family protein | - |
| C2H86_RS17660 () | 3866936..3867430 | - | 495 | WP_159409142.1 | hypothetical protein | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|