MGE detailed information
MGE type: Integrative_Conjugative_Elements MGE length: 48896 bp
Accession: NZ_CP026109 Location: 662286..711181 Organism: Paraburkholderia hospita strain DSM 17164 Replicon: chromosome
Accession: NZ_CP026109 Location: 662286..711181 Organism: Paraburkholderia hospita strain DSM 17164 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| C2L64_RS52155 () | 658791..659833 | + | 1043 | Protein_634 | lyase | - |
| C2L64_RS52160 () | 659932..660534 | - | 603 | Protein_635 | IS110 family transposase | - |
| C2L64_RS52165 () | 660726..662252 | - | 1527 | WP_090838352.1 | hypothetical protein | - |
| C2L64_RS52170 () | 662154..663107 | + | 954 | Protein_637 | Tyrosine recombinase XerC ; Integrase | Integrase |
| C2L64_RS52175 () | 663267..663536 | + | 270 | WP_086917294.1 | DUF1488 family protein | - |
| C2L64_RS52185 () | 664099..664401 | + | 303 | WP_086917292.1 | hypothetical protein | - |
| C2L64_RS54500 () | 664438..664602 | - | 165 | WP_165904498.1 | hypothetical protein | - |
| C2L64_RS53985 () | 664685..664894 | - | 210 | WP_086917291.1 | hypothetical protein | - |
| C2L64_RS53990 () | 664891..665040 | - | 150 | WP_158660683.1 | hypothetical protein | - |
| C2L64_RS52195 () | 665033..665320 | - | 288 | WP_086917290.1 | hypothetical protein | - |
| C2L64_RS52200 () | 665460..666587 | - | 1128 | WP_090838350.1 | Outer membrane porin protein | VF |
| C2L64_RS52205 () | 666782..667456 | - | 675 | WP_086917289.1 | Transcriptional regulatory protein tctD | VF |
| C2L64_RS52210 () | 667453..668835 | - | 1383 | WP_086917288.1 | Swarming motility regulation sensor protein RssA | VF |
| C2L64_RS52215 () | 668941..669774 | - | 834 | WP_042304715.1 | ABC transporter permease | - |
| C2L64_RS52220 () | 669827..670624 | - | 798 | WP_086917287.1 | Taurine import ATP-binding protein TauB | VF |
| C2L64_RS52225 () | 670725..671732 | - | 1008 | WP_086917286.1 | ABC transporter substrate-binding protein | - |
| C2L64_RS52230 () | 671893..672132 | + | 240 | WP_086917285.1 | Tn3 family transposase TnpA_IS3000 | Transposase |
| C2L64_RS52235 () | 672266..672874 | + | 609 | WP_090838348.1 | TetR/AcrR family transcriptional regulator | - |
| C2L64_RS52240 () | 672995..673804 | + | 810 | WP_086917282.1 | 3-oxoacyl-[acyl-carrier-protein] reductase FabG | VF |
| C2L64_RS52245 () | 673854..674855 | + | 1002 | WP_090838372.1 | Quinone oxidoreductase 1 | VF |
| C2L64_RS52250 () | 674956..675861 | - | 906 | WP_086915676.1 | putative 2,4-dienoyl-CoA reductase | VF |
| C2L64_RS52255 () | 676029..676147 | - | 119 | Protein_655 | ABC transporter permease | - |
| C2L64_RS52260 () | 676173..678419 | - | 2247 | WP_086915677.1 | xanthine dehydrogenase family protein molybdopterin-binding subunit | - |
| C2L64_RS52265 () | 678430..678903 | - | 474 | WP_090838346.1 | (2Fe-2S)-binding protein | - |
| C2L64_RS52270 () | 678961..679800 | - | 840 | WP_103154430.1 | putative oxidoreductase | VF |
| C2L64_RS52275 () | 679903..680844 | + | 942 | WP_090836748.1 | HTH-type transcriptional regulator PgrR | VF |
| C2L64_RS52280 () | 681451..682446 | - | 996 | WP_165904394.1 | amidohydrolase family protein | - |
| C2L64_RS52285 () | 682424..683371 | - | 948 | WP_086915032.1 | hypothetical protein | - |
| C2L64_RS52290 () | 683452..684744 | - | 1293 | WP_086915033.1 | MFS transporter | - |
| C2L64_RS52295 () | 684890..685807 | - | 918 | WP_086915034.1 | dihydrodipicolinate synthase family protein | - |
| C2L64_RS52300 () | 685810..686982 | - | 1173 | WP_086915035.1 | L-rhamnonate dehydratase | - |
| C2L64_RS52305 () | 687047..688093 | - | 1047 | WP_086915036.1 | 4-hydroxythreonine-4-phosphate dehydrogenase PdxA | - |
| C2L64_RS52310 () | 688266..689219 | + | 954 | WP_086915037.1 | LysR family transcriptional regulator | - |
| C2L64_RS52315 () | 690566..690865 | - | 300 | WP_009771251.1 | type II toxin-antitoxin system RelE/ParE family toxin | Toxin Detail |
| C2L64_RS52320 () | 690862..691104 | - | 243 | WP_007738653.1 | type II toxin-antitoxin system ParD family antitoxin | Antitoxin Detail |
| C2L64_RS52325 () | 691216..691596 | - | 381 | WP_090836750.1 | hypothetical protein | - |
| C2L64_RS52330 () | 691600..692841 | - | 1242 | WP_090836753.1 | cystathionine gamma-synthase family protein | - |
| C2L64_RS52340 () | 693854..694186 | - | 333 | WP_086915040.1 | killer protein | - |
| C2L64_RS52345 () | 694197..694649 | - | 453 | WP_086915041.1 | hypothetical protein | - |
| C2L64_RS52350 () | 694649..695356 | - | 708 | WP_086915042.1 | StbB | - |
| C2L64_RS52355 () | 695433..697217 | - | 1785 | WP_086915043.1 | hypothetical protein | - |
| C2L64_RS52360 () | 697214..698959 | - | 1746 | WP_086915044.1 | Protein VirD4 | VF |
| C2L64_RS52365 () | 699012..699365 | - | 354 | WP_086915045.1 | hypothetical protein | - |
| C2L64_RS52370 () | 699374..699610 | - | 237 | WP_086915046.1 | DUF3717 domain-containing protein | - |
| C2L64_RS52375 () | 699613..699870 | - | 258 | WP_086915047.1 | hypothetical protein | - |
| C2L64_RS52380 () | 699867..700934 | - | 1068 | WP_086915048.1 | Type IV secretion system protein VirB11 | VF |
| C2L64_RS52385 () | 700991..701626 | - | 636 | WP_133062121.1 | hypothetical protein | - |
| C2L64_RS52390 () | 701647..703047 | - | 1401 | WP_165904395.1 | Type IV secretion system protein virB10 | VF |
| C2L64_RS52395 () | 703065..704021 | - | 957 | WP_086915051.1 | TrbG/VirB9 family P-type conjugative transfer protein | - |
| C2L64_RS52400 () | 704018..704875 | - | 858 | WP_086915052.1 | Type IV secretion system protein virB8 | VF |
| C2L64_RS52410 () | 705216..706130 | - | 915 | WP_086915053.1 | type IV secretion system protein | - |
| C2L64_RS52415 () | 706154..706402 | - | 249 | WP_086915054.1 | hypothetical protein | - |
| C2L64_RS52420 () | 706392..707069 | - | 678 | WP_086915055.1 | Type IV secretion system protein virB5 | VF |
| C2L64_RS52425 () | 707094..709664 | - | 2571 | WP_090836759.1 | VirB4 family type IV secretion system protein | - |
| C2L64_RS52430 () | 709661..710101 | - | 441 | WP_090836762.1 | hypothetical protein | VF |
| C2L64_RS52435 () | 710111..710380 | - | 270 | WP_143327263.1 | hypothetical protein | - |
| C2L64_RS52440 () | 710516..711181 | - | 666 | WP_090836766.1 | Type IV secretion system protein virB1 | VF |
| C2L64_RS52445 () | 711660..712052 | + | 393 | WP_007738686.1 | transcriptional regulator | - |
| C2L64_RS52450 () | 712067..712846 | - | 780 | WP_090836876.1 | 5-oxoprolinase subunit PxpA | - |
| C2L64_RS52460 () | 713102..714166 | - | 1065 | WP_090836771.1 | TRAP transporter substrate-binding protein DctP | - |
| C2L64_RS52465 () | 714338..715003 | - | 666 | WP_090836879.1 | LuxR family transcriptional regulator | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|