MGE detailed information
MGE type: Prophage MGE length: 29721 bp
Accession: NZ_CP026098 Location: 3909016..3938736 Organism: Shigella flexneri strain FDAARGOS_74 Replicon: chromosome
Accession: NZ_CP026098 Location: 3909016..3938736 Organism: Shigella flexneri strain FDAARGOS_74 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| MC63_RS20200 (3904688) | 3904688..3904921 | + | 234 | WP_134800446.1 | hypothetical protein | - |
| MC63_RS20205 (3904932) | 3904932..3905867 | + | 936 | WP_024259953.1 | tetratricopeptide repeat protein | - |
| MC63_RS20210 (3905923) | 3905923..3906465 | - | 543 | WP_025758752.1 | GNAT family N-acetyltransferase | - |
| MC63_RS20215 (3906449) | 3906449..3906760 | - | 312 | WP_005072928.1 | DUF1778 domain-containing protein | - |
| MC63_RS20220 (3906945) | 3906945..3907835 | - | 891 | WP_025758754.1 | heme o synthase | - |
| MC63_RS20225 (3907847) | 3907847..3908176 | - | 330 | WP_000019869.1 | cytochrome o ubiquinol oxidase subunit IV | - |
| MC63_RS20230 (3908176) | 3908176..3908790 | - | 615 | WP_000179819.1 | cytochrome o ubiquinol oxidase subunit III | - |
| MC63_RS20235 (3908780) | 3908780..3909010 | - | 231 | WP_032327101.1 | hypothetical protein | - |
| MC63_RS20240 (3909016) | 3909016..3909690 | + | 675 | WP_001088287.1 | IS66 family transposase ISSfl3 | Transposase |
| MC63_RS20245 (3909687) | 3909687..3910034 | + | 348 | WP_000631709.1 | IS66 family transposase ISSfl3 | Transposase |
| MC63_RS20250 (3910054) | 3910054..3911655 | + | 1602 | WP_040235286.1 | IS66 family transposase ISSfl3 | Transposase |
| MC63_RS20255 (3911689) | 3911689..3913533 | - | 1845 | Protein_3869 | cytochrome o ubiquinol oxidase subunit I | - |
| MC63_RS20260 (3913595) | 3913595..3914656 | - | 1062 | Protein_3870 | IS66 family transposase ISSfl3 | Transposase |
| MC63_RS25345 (3915175) | 3915175..3916902 | - | 1728 | Protein_3871 | lytic transglycosylase domain-containing protein | - |
| MC63_RS20270 (3916903) | 3916903..3918234 | - | 1332 | WP_000246915.1 | phage DNA ejection protein | - |
| MC63_RS20275 (3918244) | 3918244..3918936 | - | 693 | WP_040236261.1 | hypothetical protein | - |
| MC63_RS20280 (3918939) | 3918939..3919394 | - | 456 | WP_000614050.1 | DUF2824 family protein | - |
| MC63_RS20285 (3919394) | 3919394..3919483 | - | 90 | Protein_3875 | tail needle knob protein | - |
| MC63_RS20290 (3919556) | 3919556..3920724 | + | 1169 | WP_000747032.1 | IS3 family transposase ISLad1 | Transposase |
| MC63_RS20295 (3920735) | 3920735..3921763 | + | 1029 | Protein_3877 | hypothetical protein ; Integrase | Integrase |
| MC63_RS20305 (3921968) | 3921968..3923221 | - | 1254 | WP_000893267.1 | glutamate-5-semialdehyde dehydrogenase | - |
| MC63_RS20310 (3923233) | 3923233..3924336 | - | 1104 | WP_001285280.1 | glutamate 5-kinase | - |
| MC63_RS20315 (3924624) | 3924624..3925679 | + | 1056 | WP_000749862.1 | phosphoporin PhoE | - |
| MC63_RS20320 (3925718) | 3925718..3926119 | - | 402 | WP_000174677.1 | sigma factor-binding protein Crl | - |
| - (3926837) | 3926837..3926917 | - | 81 | NuclAT_7 | - | - |
| - (3926837) | 3926837..3926917 | - | 81 | NuclAT_7 | - | - |
| - (3926837) | 3926837..3926917 | - | 81 | NuclAT_7 | - | - |
| - (3926837) | 3926837..3926917 | - | 81 | NuclAT_7 | - | - |
| MC63_RS20325 (3926177) | 3926177..3927421 | - | 1245 | WP_000189558.1 | esterase FrsA | - |
| MC63_RS20330 (3927513) | 3927513..3927971 | - | 459 | WP_001291990.1 | xanthine phosphoribosyltransferase | - |
| MC63_RS20335 (3928233) | 3928233..3929690 | + | 1458 | WP_025759252.1 | cytosol nonspecific dipeptidase | - |
| MC63_RS20340 (3929747) | 3929747..3930307 | - | 561 | Protein_3885 | peptide chain release factor H | - |
| MC63_RS20345 (3930423) | 3930423..3931467 | - | 1045 | Protein_3886 | RNA ligase RtcB family protein | - |
| MC63_RS20350 (3931713) | 3931713..3932165 | - | 453 | WP_001059862.1 | GNAT family N-acetyltransferase | - |
| MC63_RS20360 (3932930) | 3932930..3933349 | - | 420 | WP_001263492.1 | type II toxin-antitoxin system mRNA interferase toxin YafO | Toxin Detail |
| MC63_RS20365 (3933352) | 3933352..3933645 | - | 294 | WP_000554759.1 | type I toxin-antitoxin system antitoxin YafN | Antitoxin Detail |
| MC63_RS20370 (3933697) | 3933697..3934752 | - | 1056 | WP_001226172.1 | DNA polymerase IV | - |
| MC63_RS20375 (3934823) | 3934823..3935608 | - | 786 | WP_000207560.1 | hypothetical protein | VF |
| MC63_RS20380 (3935580) | 3935580..3937292 | + | 1713 | Protein_3893 | hypothetical protein | VF |
| MC63_RS20385 (3937509) | 3937509..3938006 | - | 498 | WP_000006251.1 | REP-associated tyrosine transposase RayT | - |
| MC63_RS20390 (3938182) | 3938182..3938703 | - | 522 | Protein_3895 | hypothetical protein | VF |
| MC63_RS20395 (3939087) | 3939087..3939827 | + | 741 | WP_001225676.1 | peptidoglycan meso-diaminopimelic acid protein amidase | - |
| MC63_RS20400 (3939798) | 3939798..3940565 | - | 768 | WP_000333379.1 | class II glutamine amidotransferase | - |
| MC63_RS20405 (3940771) | 3940771..3941349 | - | 579 | WP_000284050.1 | D-sedoheptulose 7-phosphate isomerase | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|