MGE detailed information
MGE type: Prophage MGE length: 58969 bp
Accession: NZ_CP026076 Location: 114291..173259 Organism: Staphylococcus aureus strain FDAARGOS_4 Replicon: chromosome
Accession: NZ_CP026076 Location: 114291..173259 Organism: Staphylococcus aureus strain FDAARGOS_4 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| RK63_RS00735 () | 110475..110789 | - | 315 | Protein_106 | MAP domain-containing protein | - |
| RK63_RS00740 () | 110776..112530 | - | 1755 | WP_001549158.1 | extracellular adherence protein Eap/Map | - |
| RK63_RS00745 () | 112916..113166 | + | 251 | Protein_108 | sphingomyelin phosphodiesterase | - |
| RK63_RS00750 () | 113488..113667 | + | 180 | WP_000669789.1 | hypothetical protein | - |
| RK63_RS00760 () | 113978..114238 | + | 261 | WP_001791826.1 | hypothetical protein | - |
| RK63_RS00765 () | 114291..114641 | - | 351 | WP_000702263.1 | Staphylococcal complement inhibitor | VF |
| RK63_RS00770 () | 115327..115776 | + | 450 | WP_000727649.1 | Chemotaxis inhibitory protein | VF |
| RK63_RS00775 () | 115871..116206 | - | 336 | Protein_113 | SH3 domain-containing protein | - |
| RK63_RS00785 () | 116856..117347 | - | 492 | WP_000919350.1 | Staphylokinase | VF |
| RK63_RS00790 () | 117538..118293 | - | 756 | WP_000861038.1 | CHAP domain-containing protein | - |
| RK63_RS00795 () | 118305..118559 | - | 255 | WP_000611512.1 | phage holin | - |
| RK63_RS00800 () | 118611..118718 | + | 108 | WP_001791821.1 | hypothetical protein | - |
| - () | 118640..118779 | + | 140 | NuclAT_0 | - | - |
| - () | 118640..118779 | + | 140 | NuclAT_0 | - | - |
| - () | 118640..118779 | + | 140 | NuclAT_0 | - | - |
| - () | 118640..118779 | + | 140 | NuclAT_0 | - | - |
| - () | 118648..118703 | + | 56 | - | - | Antitoxin Detail |
| RK63_RS00805 () | 118771..118947 | - | 177 | WP_011447039.1 | putative holin-like toxin | Toxin Detail |
| RK63_RS00810 () | 119097..119393 | - | 297 | WP_000539688.1 | DUF2951 domain-containing protein | - |
| RK63_RS00815 () | 119451..119738 | - | 288 | WP_001040261.1 | hypothetical protein | - |
| RK63_RS00820 () | 119785..119937 | - | 153 | WP_001153681.1 | hypothetical protein | - |
| RK63_RS00825 () | 119927..123712 | - | 3786 | WP_000582165.1 | hypothetical protein | - |
| RK63_RS00830 () | 123728..125212 | - | 1485 | WP_000567394.1 | phage tail family protein | - |
| RK63_RS00835 () | 125209..129738 | - | 4530 | WP_001551779.1 | phage tail tape measure protein | - |
| RK63_RS14795 () | 129795..129932 | - | 138 | WP_001549167.1 | hypothetical protein | - |
| RK63_RS00840 () | 129983..130333 | - | 351 | WP_001096354.1 | hypothetical protein | - |
| RK63_RS00845 () | 130383..130622 | - | 240 | WP_094969769.1 | Ig-like domain-containing protein | - |
| RK63_RS00850 () | 130649..131293 | - | 645 | WP_000260578.1 | phage tail protein | - |
| RK63_RS00855 () | 131297..131701 | - | 405 | WP_000565500.1 | hypothetical protein | - |
| RK63_RS00860 () | 131698..132102 | - | 405 | WP_000114229.1 | HK97 gp10 family phage protein | - |
| RK63_RS00865 () | 132099..132461 | - | 363 | WP_000755150.1 | head-tail adaptor protein | - |
| RK63_RS00870 () | 132445..132729 | - | 285 | WP_000150936.1 | phage head-tail adapter protein | - |
| RK63_RS00875 () | 132719..133003 | - | 285 | WP_000238236.1 | hypothetical protein | - |
| RK63_RS00880 () | 133023..134168 | - | 1146 | WP_000154559.1 | phage major capsid protein | - |
| RK63_RS00885 () | 134192..134929 | - | 738 | WP_000642728.1 | Clp protease ClpP | - |
| RK63_RS00890 () | 134913..136100 | - | 1188 | WP_000025274.1 | phage portal protein | - |
| RK63_RS00895 () | 136116..137777 | - | 1662 | WP_000625088.1 | terminase large subunit | - |
| RK63_RS00900 () | 137774..138118 | - | 345 | WP_000402904.1 | hypothetical protein | - |
| RK63_RS00905 () | 138248..138547 | - | 300 | WP_000988336.1 | HNH endonuclease | - |
| RK63_RS00910 () | 138779..139195 | - | 417 | WP_000590122.1 | hypothetical protein | - |
| RK63_RS00915 () | 139223..139423 | - | 201 | WP_000265043.1 | DUF1514 family protein | - |
| RK63_RS00920 () | 139423..139572 | - | 150 | WP_000595265.1 | transcriptional activator RinB | - |
| RK63_RS00925 () | 139569..139955 | - | 387 | WP_000592207.1 | hypothetical protein | - |
| RK63_RS00930 () | 139952..140158 | - | 207 | WP_000195803.1 | DUF1381 domain-containing protein | - |
| RK63_RS00935 () | 140155..140400 | - | 246 | WP_001282074.1 | hypothetical protein | - |
| RK63_RS00940 () | 140437..140970 | - | 534 | WP_000181819.1 | dUTP pyrophosphatase | - |
| RK63_RS00945 () | 140963..141205 | - | 243 | WP_000700108.1 | hypothetical protein | - |
| RK63_RS00950 () | 141195..141431 | - | 237 | WP_001065101.1 | DUF1024 family protein | - |
| RK63_RS00955 () | 141424..141795 | - | 372 | WP_001549172.1 | hypothetical protein | - |
| RK63_RS00960 () | 141804..142046 | - | 243 | WP_000131383.1 | phi PVL orf 51-like protein | - |
| RK63_RS00965 () | 142050..142418 | - | 369 | WP_000101288.1 | hypothetical protein | - |
| RK63_RS00970 () | 142431..142835 | - | 405 | WP_000401977.1 | RusA family crossover junction endodeoxyribonuclease | - |
| RK63_RS00975 () | 142844..143062 | - | 219 | WP_000338530.1 | hypothetical protein | - |
| RK63_RS00980 () | 143069..143962 | - | 894 | WP_000148333.1 | DnaD domain-containing protein | - |
| RK63_RS00985 () | 143992..144462 | - | 471 | WP_000934753.1 | single-stranded DNA-binding protein | - |
| RK63_RS00990 () | 144463..145080 | - | 618 | WP_071665632.1 | MBL fold metallo-hydrolase | - |
| RK63_RS00995 () | 145161..146081 | - | 921 | WP_000138475.1 | recombinase RecT | - |
| RK63_RS01000 () | 146083..148026 | - | 1944 | WP_000700561.1 | AAA family ATPase | - |
| RK63_RS01005 () | 148035..148298 | - | 264 | WP_001205732.1 | hypothetical protein | - |
| RK63_RS01010 () | 148307..148567 | - | 261 | WP_000291513.1 | DUF1108 family protein | - |
| RK63_RS01015 () | 148607..148867 | - | 261 | WP_001549178.1 | DUF2482 family protein | - |
| RK63_RS01020 () | 148962..149123 | - | 162 | WP_001285960.1 | DUF1270 domain-containing protein | - |
| RK63_RS01025 () | 149120..149440 | - | 321 | WP_001120197.1 | DUF771 domain-containing protein | - |
| RK63_RS01030 () | 149499..149729 | + | 231 | WP_000549548.1 | hypothetical protein | - |
| RK63_RS14800 () | 149726..149902 | - | 177 | WP_001001356.1 | hypothetical protein | - |
| RK63_RS01035 () | 149918..150670 | - | 753 | WP_001148642.1 | phage antirepressor KilAC domain-containing protein | - |
| RK63_RS01040 () | 150721..151050 | + | 330 | WP_000180411.1 | hypothetical protein | - |
| RK63_RS01045 () | 151039..151254 | - | 216 | WP_001025404.1 | DUF2829 domain-containing protein | - |
| RK63_RS01050 () | 151270..151533 | - | 264 | WP_000854072.1 | helix-turn-helix domain-containing protein | - |
| RK63_RS01055 () | 151530..151703 | - | 174 | WP_001801500.1 | hypothetical protein | - |
| RK63_RS01060 () | 151666..152379 | + | 714 | WP_001031454.1 | XRE family transcriptional regulator | - |
| RK63_RS01065 () | 152395..153327 | + | 933 | WP_000759682.1 | ATP-dependent helicase | - |
| RK63_RS01070 () | 153333..153674 | + | 342 | WP_000591749.1 | hypothetical protein | - |
| RK63_RS01075 () | 153878..154060 | + | 183 | WP_000705246.1 | hypothetical protein | - |
| RK63_RS01080 () | 154138..154851 | + | 714 | WP_001549185.1 | type II toxin-antitoxin system PemK/MazF family toxin | - |
| RK63_RS01085 () | 155042..156079 | + | 1038 | WP_000857198.1 | Tyrosine recombinase XerC ; Integrase | Integrase |
| RK63_RS01090 () | 156130..156960 | + | 831 | Protein_177 | Phospholipase C | VF |
| RK63_RS01095 () | 157198..158214 | - | 1017 | WP_000595324.1 | putative leukocidin-like protein 1 | VF |
| RK63_RS01100 () | 158236..159291 | - | 1056 | WP_000791407.1 | putative leukocidin-like protein 2 | VF |
| RK63_RS01105 () | 159726..160949 | + | 1224 | WP_000206638.1 | ArgE/DapE family deacylase | - |
| RK63_RS01110 () | 161321..162166 | - | 846 | WP_000812008.1 | class I SAM-dependent methyltransferase | - |
| RK63_RS01115 () | 162228..163139 | - | 912 | WP_000825510.1 | Iron(3+)-hydroxamate-binding protein FhuD | VF |
| RK63_RS01120 () | 163300..164607 | + | 1308 | WP_001045079.1 | TrkH family potassium uptake protein | - |
| RK63_RS01130 () | 165460..165903 | - | 444 | WP_000022887.1 | GNAT family N-acetyltransferase | - |
| RK63_RS01135 () | 166068..166445 | - | 378 | WP_001797573.1 | hypothetical protein | - |
| RK63_RS01140 () | 166763..167353 | - | 591 | WP_001293058.1 | terminase small subunit | - |
| RK63_RS01145 () | 167350..167562 | - | 213 | WP_000128898.1 | hypothetical protein | - |
| RK63_RS01150 () | 167623..168169 | + | 547 | Protein_188 | site-specific integrase | - |
| RK63_RS01155 () | 168264..169880 | - | 1617 | WP_000240645.1 | 60 kDa chaperonin | VF |
| RK63_RS01160 () | 169956..170240 | - | 285 | WP_000917289.1 | co-chaperone GroES | - |
| RK63_RS01165 () | 170415..171158 | + | 744 | WP_000197635.1 | CPBP family intramembrane metalloprotease | - |
| RK63_RS01170 () | 171183..172436 | - | 1254 | WP_000120307.1 | hypothetical protein | VF |
| RK63_RS01175 () | 172633..173259 | + | 627 | WP_000522384.1 | nitroreductase family protein | - |
| RK63_RS01180 () | 173620..174405 | + | 786 | WP_000867960.1 | carbon-nitrogen family hydrolase | - |
| RK63_RS01185 () | 175002..175136 | - | 135 | WP_001549197.1 | delta-lysin family phenol-soluble modulin | - |
| RK63_RS01190 () | 175371..175940 | + | 570 | WP_001105707.1 | accessory gene regulator AgrB | - |
| RK63_RS01195 () | 175937..176077 | + | 141 | WP_001093929.1 | cyclic lactone autoinducer peptide | - |
| RK63_RS01200 () | 176102..177394 | + | 1293 | Protein_198 | GHKL domain-containing protein | - |
| RK63_RS01205 () | 177413..178129 | + | 717 | WP_000688492.1 | LytTR family DNA-binding domain-containing protein | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|