MGE detailed information
MGE type: Prophage MGE length: 78542 bp
Accession: NZ_CP026068 Location: 1269959..1348500 Organism: Staphylococcus aureus strain FDAARGOS_24 Replicon: chromosome
Accession: NZ_CP026068 Location: 1269959..1348500 Organism: Staphylococcus aureus strain FDAARGOS_24 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| RK82_RS06310 () | 1265620..1267122 | - | 1503 | WP_001261681.1 | FAD/NAD(P)-binding domain-containing protein | - |
| RK82_RS06315 () | 1267645..1267959 | + | 315 | WP_000221179.1 | metalloregulator ArsR/SmtB family transcription factor | - |
| RK82_RS06320 () | 1267959..1269251 | + | 1293 | WP_000989123.1 | arsenite efflux transporter membrane subunit ArsB | - |
| RK82_RS06325 () | 1269269..1269664 | + | 396 | WP_000163235.1 | arsenate reductase (thioredoxin) | - |
| RK82_RS06330 () | 1269959..1270813 | - | 855 | WP_001032833.1 | N-acetylglucosaminidase | - |
| RK82_RS06335 () | 1271089..1271313 | - | 225 | WP_000384171.1 | hypothetical protein | - |
| RK82_RS06340 () | 1271512..1271982 | + | 471 | WP_000671063.1 | RNA polymerase sigma factor SigS | - |
| RK82_RS06345 () | 1272095..1272538 | + | 444 | WP_001153742.1 | competence protein ComK | - |
| RK82_RS06350 () | 1272525..1272968 | - | 444 | WP_001030465.1 | hypothetical protein | - |
| RK82_RS06355 () | 1273264..1273899 | + | 636 | WP_001168904.1 | CPBP family intramembrane metalloprotease SdpA | - |
| RK82_RS06360 () | 1274339..1275052 | - | 714 | WP_001096494.1 | transaldolase | - |
| RK82_RS06365 () | 1275312..1275614 | + | 303 | WP_000091445.1 | hypothetical protein | - |
| RK82_RS06370 () | 1275870..1276235 | + | 366 | WP_001200542.1 | fluoride efflux transporter CrcB | - |
| RK82_RS06375 () | 1276232..1276585 | + | 354 | WP_000623471.1 | CrcB family protein | - |
| RK82_RS06380 () | 1276982..1278606 | + | 1625 | Protein_1209 | IS1182 family transposase ISSau3 | Transposase |
| RK82_RS06385 () | 1278669..1279502 | - | 834 | WP_000453320.1 | aldo/keto reductase | - |
| RK82_RS06390 () | 1279714..1280622 | - | 909 | WP_000366154.1 | NERD domain-containing protein | - |
| RK82_RS06395 () | 1280747..1281940 | - | 1194 | WP_000933822.1 | methionine adenosyltransferase | - |
| RK82_RS06400 () | 1282311..1283903 | + | 1593 | WP_000109906.1 | phosphoenolpyruvate carboxykinase (ATP) | - |
| RK82_RS06405 () | 1284039..1284524 | - | 486 | WP_103149850.1 | IS200-IS605 family transposase ISSep3 | Transposase |
| RK82_RS06410 () | 1284899..1285645 | - | 747 | WP_002868962.1 | S9 family peptidase | - |
| RK82_RS06415 () | 1285650..1286123 | - | 474 | WP_000672014.1 | nucleoside triphosphatase YtkD | - |
| RK82_RS06420 () | 1286189..1286446 | + | 258 | WP_000718107.1 | membrane protein insertion efficiency factor YidD | - |
| RK82_RS06425 () | 1286443..1287444 | - | 1002 | WP_000778523.1 | o-succinylbenzoate synthase | - |
| RK82_RS06430 () | 1287449..1288927 | - | 1479 | WP_000348360.1 | o-succinylbenzoate--CoA ligase | - |
| RK82_RS06435 () | 1289086..1289541 | - | 456 | WP_011443643.1 | DUF4909 domain-containing protein | - |
| RK82_RS06440 () | 1289844..1290494 | + | 651 | WP_001795535.1 | excalibur calcium-binding domain-containing protein | - |
| RK82_RS06445 () | 1290575..1291570 | + | 996 | WP_000070653.1 | DUF4352 domain-containing protein | - |
| RK82_RS06450 () | 1291646..1292272 | + | 627 | WP_000669046.1 | hypothetical protein | - |
| RK82_RS06455 () | 1292313..1292657 | + | 345 | WP_000627551.1 | DUF3969 family protein | - |
| RK82_RS06460 () | 1292755..1293306 | + | 552 | WP_000414205.1 | hypothetical protein | - |
| RK82_RS06465 () | 1293524..1294165 | - | 642 | WP_000494956.1 | ImmA/IrrE family metallo-endopeptidase | - |
| RK82_RS06470 () | 1294279..1294464 | - | 186 | WP_000809857.1 | hypothetical protein | - |
| RK82_RS06475 () | 1294466..1294642 | - | 177 | WP_000375476.1 | hypothetical protein | - |
| RK82_RS06480 () | 1294653..1295036 | - | 384 | WP_000070812.1 | hypothetical protein | - |
| RK82_RS06490 () | 1295640..1295783 | - | 144 | WP_001549059.1 | IS3 family transposase IS655 | Transposase |
| RK82_RS13915 () | 1295986..1296081 | + | 96 | WP_001801861.1 | type I toxin-antitoxin system Fst family toxin PepA1 | Toxin Detail |
| - () | 1296109..1296168 | - | 60 | - | - | Antitoxin Detail |
| RK82_RS06500 () | 1296204..1296305 | + | 102 | WP_001791893.1 | hypothetical protein | - |
| RK82_RS06505 () | 1296283..1296459 | - | 177 | Protein_1233 | transposase | - |
| RK82_RS06510 () | 1296653..1297030 | - | 378 | WP_001037045.1 | DUF1433 domain-containing protein | - |
| RK82_RS06515 () | 1297550..1301662 | - | 4113 | WP_000831218.1 | ATP-binding protein | - |
| RK82_RS06520 () | 1302512..1303711 | - | 1200 | WP_000072624.1 | restriction endonuclease subunit S | - |
| RK82_RS06525 () | 1303704..1305260 | - | 1557 | WP_001566696.1 | type I restriction-modification system subunit M | - |
| RK82_RS06530 () | 1305424..1305558 | - | 135 | WP_001791797.1 | hypothetical protein | - |
| RK82_RS06535 () | 1305623..1306342 | - | 720 | WP_001038688.1 | Serine protease SplF | VF |
| RK82_RS06540 () | 1306493..1307209 | - | 717 | WP_001038759.1 | Serine protease SplE | VF |
| RK82_RS06545 () | 1307311..1307418 | + | 108 | WP_011447030.1 | hypothetical protein | - |
| RK82_RS06550 () | 1307367..1308086 | - | 720 | WP_001038704.1 | Serine protease SplD | VF |
| RK82_RS06555 () | 1308207..1308926 | - | 720 | WP_001038867.1 | Serine protease SplC | VF |
| RK82_RS06560 () | 1308984..1309706 | - | 723 | WP_001039447.1 | Serine protease SplB | VF |
| RK82_RS06565 () | 1309831..1310538 | - | 708 | WP_001039435.1 | Serine protease SplA | VF |
| RK82_RS06575 () | 1311502..1312068 | + | 567 | WP_001092763.1 | DUF4888 domain-containing protein | - |
| RK82_RS06580 () | 1312542..1313240 | - | 699 | WP_000586140.1 | hypothetical protein | - |
| RK82_RS06585 () | 1313237..1313998 | - | 762 | WP_000581552.1 | lantibiotic immunity ABC transporter MutE/EpiE family permease subunit | - |
| RK82_RS06590 () | 1313995..1314687 | - | 693 | WP_001096791.1 | putative ABC transporter ATP-binding protein YxlF | VF |
| RK82_RS06595 () | 1314710..1316083 | - | 1374 | WP_000691541.1 | S8 family serine peptidase | - |
| RK82_RS06600 () | 1316093..1316611 | - | 519 | WP_000504439.1 | flavoprotein | - |
| RK82_RS06605 () | 1316627..1317871 | - | 1245 | WP_000566596.1 | lanthionine synthetase C family protein | - |
| RK82_RS06610 () | 1317864..1320857 | - | 2994 | WP_001092605.1 | lantibiotic dehydratase | - |
| RK82_RS06615 () | 1320922..1321065 | - | 144 | WP_000416756.1 | gallidermin/nisin family lantibiotic | - |
| RK82_RS06625 () | 1321802..1321945 | - | 144 | WP_000416759.1 | gallidermin/nisin family lantibiotic | - |
| RK82_RS06630 () | 1322187..1323170 | - | 984 | WP_000782464.1 | Leucotoxin LukDv | VF |
| RK82_RS06635 () | 1323172..1324092 | - | 921 | WP_000878802.1 | Leucotoxin LukEv | VF |
| RK82_RS06640 () | 1324906..1325445 | + | 540 | WP_001790220.1 | hypothetical protein | - |
| RK82_RS06645 () | 1325458..1326246 | + | 789 | WP_000206350.1 | DUF1828 domain-containing protein | - |
| RK82_RS06700 () | 1328703..1329257 | - | 555 | WP_000132889.1 | alpha/beta hydrolase | - |
| RK82_RS06710 () | 1329580..1330980 | - | 1401 | WP_000167538.1 | protoporphyrinogen oxidase | - |
| RK82_RS06715 () | 1331004..1331927 | - | 924 | WP_000162880.1 | ferrochelatase | - |
| RK82_RS06720 () | 1331985..1333022 | - | 1038 | WP_000233526.1 | uroporphyrinogen decarboxylase | - |
| RK82_RS06725 () | 1333012..1333122 | - | 111 | WP_001790154.1 | hypothetical protein | - |
| RK82_RS06730 () | 1333285..1333788 | + | 504 | WP_000737976.1 | signal transduction protein TRAP | - |
| RK82_RS06735 () | 1333912..1335135 | - | 1224 | WP_001245769.1 | ABC transporter permease | - |
| RK82_RS06740 () | 1335128..1335868 | - | 741 | WP_000216878.1 | ABC-type transporter ATP-binding protein EcsA | VF |
| RK82_RS06745 () | 1336002..1336424 | + | 423 | WP_000004981.1 | HIT family protein | - |
| RK82_RS06750 () | 1336566..1336931 | + | 366 | WP_000648118.1 | YtxH domain-containing protein | - |
| RK82_RS06760 () | 1337664..1338221 | + | 558 | WP_000477959.1 | DUF3267 domain-containing protein | - |
| RK82_RS06765 () | 1338426..1339388 | + | 963 | WP_000782121.1 | Foldase protein PrsA | VF |
| RK82_RS06770 () | 1339509..1340450 | - | 942 | WP_001244175.1 | 3'-5' exoribonuclease YhaM | - |
| RK82_RS06775 () | 1340447..1343383 | - | 2937 | WP_000584648.1 | AAA family ATPase | - |
| RK82_RS06780 () | 1343373..1344569 | - | 1197 | WP_000238227.1 | exonuclease SbcCD subunit D | - |
| RK82_RS06785 () | 1344860..1344958 | - | 99 | WP_001791795.1 | hypothetical protein | - |
| RK82_RS06795 () | 1345341..1345685 | - | 345 | WP_000290301.1 | YlbF/YmcA family competence regulator | - |
| RK82_RS06800 () | 1345754..1346878 | - | 1125 | WP_000992527.1 | DUF445 domain-containing protein | - |
| RK82_RS06805 () | 1347057..1347521 | - | 465 | WP_000375864.1 | helix-turn-helix transcriptional regulator | - |
| RK82_RS06810 () | 1347877..1348500 | - | 624 | WP_001045133.1 | Transcriptional regulatory protein LiaR | VF |
| RK82_RS06815 () | 1348522..1349634 | - | 1113 | WP_000437967.1 | GAF domain-containing sensor histidine kinase | - |
| RK82_RS06820 () | 1349797..1350618 | + | 822 | WP_000669376.1 | RluA family pseudouridine synthase | - |
| RK82_RS06825 () | 1351081..1352466 | - | 1386 | WP_000116224.1 | class II fumarate hydratase | - |
| RK82_RS06830 () | 1352662..1353057 | - | 396 | WP_000901021.1 | hypothetical protein | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|