MGE detailed information
MGE type: Prophage MGE length: 41816 bp
Accession: NZ_CP025985 Location: 2226119..2267934 Organism: Ralstonia solanacearum strain RSCM Replicon: chromosome
Accession: NZ_CP025985 Location: 2226119..2267934 Organism: Ralstonia solanacearum strain RSCM Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| CYD94_RS10245 () | 2221787..2222440 | - | 654 | WP_003267806.1 | ATP-dependent Clp endopeptidase proteolytic subunit ClpP | - |
| CYD94_RS10250 () | 2222470..2223819 | - | 1350 | WP_058907545.1 | trigger factor | - |
| CYD94_RS10255 () | 2224074..2226047 | - | 1974 | WP_058907546.1 | bifunctional tRNA (5-methylaminomethyl-2-thiouridine)(34)-methyltransferase MnmD/FAD-dependent 5-carboxymethylaminomethyl-2-thiouridine(34) oxidoreductase MnmC | - |
| CYD94_RS10260 () | 2226119..2226313 | - | 195 | WP_011001649.1 | hypothetical protein | - |
| CYD94_RS10265 () | 2226810..2227847 | + | 1038 | WP_103025877.1 | LysM peptidoglycan-binding domain-containing protein | - |
| CYD94_RS27310 () | 2228413..2228985 | + | 573 | WP_158655389.1 | hypothetical protein | - |
| CYD94_RS27315 () | 2228982..2229173 | + | 192 | WP_158655390.1 | hypothetical protein | - |
| CYD94_RS10275 () | 2229300..2230550 | - | 1251 | WP_103025565.1 | IS256 family transposase ISRso7 | Transposase |
| CYD94_RS10280 () | 2230679..2231224 | - | 546 | WP_103025726.1 | lysis system i-spanin subunit Rz | - |
| CYD94_RS10285 () | 2231224..2231499 | - | 276 | WP_103025727.1 | hypothetical protein | - |
| CYD94_RS10290 () | 2231502..2231810 | - | 309 | WP_011001642.1 | hypothetical protein | - |
| CYD94_RS10295 () | 2231810..2232301 | - | 492 | WP_011001641.1 | glycoside hydrolase family protein | - |
| CYD94_RS10300 () | 2232370..2233026 | - | 657 | WP_072633591.1 | hypothetical protein | - |
| CYD94_RS10310 () | 2233363..2236518 | - | 3156 | WP_103025728.1 | host specificity protein J | - |
| CYD94_RS10315 () | 2236569..2236823 | + | 255 | WP_072633588.1 | type II toxin-antitoxin system HicA family toxin | Toxin Detail |
| CYD94_RS10320 () | 2236820..2237158 | + | 339 | WP_028853154.1 | type II toxin-antitoxin system HicB family antitoxin | Antitoxin Detail |
| CYD94_RS10325 () | 2237228..2237830 | - | 603 | WP_072633645.1 | tail assembly protein | - |
| CYD94_RS10330 () | 2237834..2238544 | - | 711 | WP_072633587.1 | C40 family peptidase | - |
| CYD94_RS10335 () | 2238546..2239247 | - | 702 | WP_103025729.1 | phage minor tail protein L | - |
| CYD94_RS10340 () | 2239244..2239840 | - | 597 | WP_103025730.1 | tail fiber assembly protein | - |
| CYD94_RS10345 () | 2239846..2240523 | - | 678 | WP_103025731.1 | phage tail protein | - |
| CYD94_RS10350 () | 2240520..2240858 | - | 339 | WP_103025732.1 | phage tail protein | - |
| CYD94_RS10355 () | 2240861..2243734 | - | 2874 | WP_103025733.1 | phage tail tape measure protein | - |
| CYD94_RS10360 () | 2243736..2243996 | - | 261 | WP_081365331.1 | DUF1799 domain-containing protein | - |
| CYD94_RS10365 () | 2244044..2244364 | - | 321 | WP_072633580.1 | hypothetical protein | - |
| CYD94_RS10370 () | 2244371..2245024 | - | 654 | WP_072633579.1 | phage tail protein | - |
| CYD94_RS10375 () | 2245088..2245441 | - | 354 | WP_103025734.1 | DUF3168 domain-containing protein | - |
| CYD94_RS10380 () | 2245431..2245931 | - | 501 | WP_103025735.1 | hypothetical protein | - |
| CYD94_RS10385 () | 2245934..2246260 | - | 327 | WP_103025736.1 | phage head closure protein | - |
| CYD94_RS10390 () | 2246261..2246815 | - | 555 | WP_103025737.1 | hypothetical protein | - |
| CYD94_RS10395 () | 2246819..2247214 | - | 396 | WP_103025738.1 | hypothetical protein | - |
| CYD94_RS10400 () | 2247252..2248508 | - | 1257 | WP_103025739.1 | phage major capsid protein | - |
| CYD94_RS10405 () | 2248573..2249337 | - | 765 | WP_103025740.1 | Clp protease ClpP | - |
| CYD94_RS10410 () | 2249303..2250610 | - | 1308 | WP_103025741.1 | phage portal protein | - |
| CYD94_RS10415 () | 2250607..2252265 | - | 1659 | WP_103025742.1 | terminase large subunit | - |
| CYD94_RS10420 () | 2252316..2252678 | - | 363 | WP_103025878.1 | hypothetical protein | - |
| CYD94_RS10425 () | 2253054..2253491 | - | 438 | WP_103025743.1 | HNH endonuclease | - |
| CYD94_RS10430 () | 2253663..2254265 | - | 603 | WP_103025744.1 | hypothetical protein | - |
| CYD94_RS10435 () | 2254289..2254585 | - | 297 | WP_103025745.1 | hypothetical protein | - |
| CYD94_RS10440 () | 2254582..2255616 | - | 1035 | WP_103025746.1 | hypothetical protein | - |
| CYD94_RS10445 () | 2255613..2255810 | - | 198 | WP_011001618.1 | hypothetical protein | - |
| CYD94_RS10450 () | 2255819..2256229 | - | 411 | WP_103025747.1 | hypothetical protein | - |
| CYD94_RS10455 () | 2256226..2256729 | - | 504 | WP_072633567.1 | hypothetical protein | - |
| CYD94_RS27320 () | 2256975..2257223 | - | 249 | WP_158655391.1 | hypothetical protein | - |
| CYD94_RS10460 () | 2257286..2257810 | + | 525 | WP_078222094.1 | helix-turn-helix domain-containing protein | - |
| CYD94_RS10465 () | 2258093..2258713 | + | 621 | WP_103025879.1 | hypothetical protein | - |
| CYD94_RS10470 () | 2259408..2259782 | + | 375 | WP_103025748.1 | hypothetical protein | - |
| CYD94_RS10475 () | 2259779..2260216 | + | 438 | WP_103025749.1 | hypothetical protein | - |
| CYD94_RS27615 () | 2260213..2260365 | + | 153 | WP_199773154.1 | hypothetical protein | - |
| CYD94_RS10480 () | 2260371..2260586 | + | 216 | WP_103025750.1 | hypothetical protein | - |
| CYD94_RS10485 () | 2260596..2261027 | + | 432 | WP_072633562.1 | hypothetical protein | - |
| CYD94_RS10490 () | 2261024..2261260 | + | 237 | WP_103025751.1 | hypothetical protein | - |
| CYD94_RS10495 () | 2261286..2261879 | + | 594 | WP_103025752.1 | PRTRC system protein E | - |
| CYD94_RS10500 () | 2261892..2262281 | + | 390 | WP_071623742.1 | PRTRC system protein C | - |
| CYD94_RS10505 () | 2262278..2263327 | + | 1050 | WP_103025753.1 | PRTRC system protein F | - |
| CYD94_RS10510 () | 2263335..2264057 | + | 723 | WP_072633557.1 | PRTRC system protein B | - |
| CYD94_RS10515 () | 2264059..2264844 | + | 786 | WP_103025754.1 | PRTRC system protein A | - |
| CYD94_RS10520 () | 2264841..2265641 | + | 801 | WP_103025755.1 | PRTRC system ThiF family protein | - |
| CYD94_RS10525 () | 2265643..2267121 | + | 1479 | WP_103025756.1 | hypothetical protein | - |
| CYD94_RS10530 () | 2267176..2267484 | + | 309 | WP_071623736.1 | hypothetical protein | - |
| CYD94_RS10535 () | 2267485..2268018 | - | 534 | Protein_2059 | hypothetical protein ; Integrase | Integrase |
| CYD94_RS10540 () | 2268105..2268569 | + | 465 | WP_103025505.1 | transposase | - |
| CYD94_RS10545 () | 2268569..2268919 | + | 351 | WP_103025506.1 | IS66 family insertion sequence element accessory protein TnpB | - |
| CYD94_RS10550 () | 2268951..2270522 | + | 1572 | WP_071624213.1 | IS66 family transposase | - |
| CYD94_RS10555 () | 2270556..2271047 | - | 492 | Protein_2063 | site-specific integrase | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|