MGE detailed information
MGE type: Non-Mobilizable plasmid MGE length: 148809 bp
Accession: NZ_CP025980 Location: 1..148809 Organism: Escherichia marmotae strain HT073016 Replicon: plasmid pEM148
Accession: NZ_CP025980 Location: 1..148809 Organism: Escherichia marmotae strain HT073016 Replicon: plasmid pEM148
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| C1192_RS25235 () | 1294..1452 | - | 159 | Protein_1 | IS1 family transposase IS1N | Transposase |
| C1192_RS23875 () | 1648..3330 | + | 1683 | WP_103194830.1 | putative E3 ubiquitin-protein ligase ipaH7.8 | VF |
| C1192_RS23880 () | 3642..3958 | + | 317 | Protein_3 | IS3 family transposase ISEc16 | Transposase |
| C1192_RS23885 () | 3997..5205 | - | 1209 | WP_103194764.1 | IS256 family transposase IS1414 | Transposase |
| C1192_RS23890 () | 5279..6115 | + | 837 | Protein_5 | IS3 family transposase ISEc16 | Transposase |
| C1192_RS23895 () | 6330..7319 | - | 990 | WP_038355987.1 | hypothetical protein | VF |
| C1192_RS23905 () | 7645..8352 | + | 708 | WP_038355991.1 | hypothetical protein | - |
| C1192_RS23910 () | 8966..10150 | + | 1185 | WP_038355986.1 | Cysteine protease-like VirA | VF |
| C1192_RS23915 () | 10747..11274 | + | 528 | WP_077784608.1 | hypothetical protein | VF |
| C1192_RS23920 () | 11271..11878 | - | 608 | Protein_10 | transposase | - |
| C1192_RS23925 () | 12907..13380 | + | 474 | WP_158650420.1 | DUF2726 domain-containing protein | - |
| C1192_RS23930 () | 13590..14426 | + | 837 | WP_052463085.1 | hypothetical protein | VF |
| C1192_RS23935 () | 14648..15444 | - | 797 | Protein_13 | IS3 family transposase | - |
| C1192_RS23940 () | 16232..16483 | + | 252 | WP_038355984.1 | hypothetical protein | - |
| C1192_RS23945 () | 16606..17058 | - | 453 | WP_038355983.1 | hypothetical protein | VF |
| C1192_RS23950 () | 17550..17816 | + | 267 | WP_077784606.1 | relaxosome protein TraM | - |
| C1192_RS23960 () | 19390..19962 | - | 573 | WP_038354881.1 | Effector protein NleF | VF |
| C1192_RS23965 () | 20159..21309 | + | 1151 | WP_103194781.1 | IS3 family transposase ISEc16 | Transposase |
| C1192_RS23970 () | 21610..22158 | + | 549 | Protein_20 | IS630 family transposase IS630 | Transposase |
| C1192_RS23975 () | 22249..22986 | - | 738 | Protein_21 | IS66 family transposase ISShdy2 | Transposase |
| C1192_RS23980 () | 23064..23402 | - | 339 | WP_038356024.1 | IS66 family insertion sequence element accessory protein TnpB | - |
| C1192_RS23985 () | 23396..23683 | - | 288 | WP_038356027.1 | IS66 family insertion sequence hypothetical protein | - |
| C1192_RS23990 () | 23787..24275 | + | 489 | Protein_24 | IS630 family transposase ISEc33 | Transposase |
| C1192_RS23995 () | 24308..24593 | + | 286 | Protein_25 | IS110 family transposase | - |
| C1192_RS24005 () | 24895..25401 | - | 507 | Protein_26 | transposase | - |
| C1192_RS24010 () | 25474..26205 | - | 732 | WP_038356023.1 | phosphatase PAP2 family protein | - |
| C1192_RS24015 () | 26439..26629 | + | 191 | Protein_28 | IS1 family transposase | - |
| C1192_RS24020 () | 26664..27182 | - | 519 | WP_072041627.1 | Tn3 family transposase TnpR_Tn3 | Transposase |
| C1192_RS24025 () | 27342..27734 | + | 393 | WP_038356022.1 | Tn3 family transposase TnpA_IS3000 | Transposase |
| C1192_RS25370 () | 27654..27875 | - | 222 | Protein_31 | hypothetical protein | - |
| C1192_RS24035 () | 28379..29194 | + | 816 | Protein_32 | IS630 family transposase IS630 | Transposase |
| C1192_RS24040 () | 29529..30737 | - | 1209 | WP_103194764.1 | IS256 family transposase IS1414 | Transposase |
| C1192_RS24045 () | 30847..30954 | + | 108 | WP_103194831.1 | tail fiber assembly protein | - |
| C1192_RS24050 () | 31025..33088 | - | 2064 | WP_158650421.1 | E3 ubiquitin-protein ligase ipaH3 | VF |
| C1192_RS24055 () | 33328..33882 | + | 555 | Protein_36 | ISNCY family transposase ISKpn21 | Transposase |
| C1192_RS24060 () | 34064..34291 | + | 228 | Protein_37 | ISNCY family transposase ISKpn21 | Transposase |
| C1192_RS24065 () | 34478..36424 | - | 1947 | WP_052463078.1 | hypothetical protein | VF |
| C1192_RS24070 () | 37055..37306 | + | 252 | WP_038355929.1 | YoeB-YefM toxin-antitoxin system antitoxin YefM | Antitoxin Detail |
| C1192_RS24075 () | 37303..37557 | + | 255 | WP_038355928.1 | type II toxin-antitoxin system mRNA interferase toxin YoeB | Toxin Detail |
| C1192_RS24080 () | 37586..37843 | - | 258 | WP_052463077.1 | hypothetical protein | - |
| C1192_RS24085 () | 38373..38909 | - | 537 | WP_038355927.1 | Type II secretion system protein M | VF |
| C1192_RS24090 () | 38896..40089 | - | 1194 | WP_038355926.1 | Type II secretion system protein L | VF |
| C1192_RS24095 () | 40086..41063 | - | 978 | WP_038355925.1 | Putative type II secretion system protein K | VF |
| C1192_RS24100 () | 41063..41665 | - | 603 | WP_038355924.1 | Type II secretion system protein J | VF |
| C1192_RS24105 () | 41662..42033 | - | 372 | WP_038355923.1 | Type II secretion system protein I | VF |
| C1192_RS24110 () | 42030..42593 | - | 564 | WP_038355922.1 | Type II secretion system protein H | VF |
| C1192_RS24115 () | 42597..43052 | - | 456 | WP_038355921.1 | Type II secretion system protein G | VF |
| C1192_RS24120 () | 43069..44292 | - | 1224 | WP_038355920.1 | Type II secretion system protein F | VF |
| C1192_RS24125 () | 44292..45785 | - | 1494 | WP_038355919.1 | Type II secretion system protein E | VF |
| C1192_RS24130 () | 45785..47845 | - | 2061 | WP_038355918.1 | Type II secretion system protein D | VF |
| C1192_RS24135 () | 47875..48834 | - | 960 | WP_038355917.1 | Type II secretion system protein C | VF |
| C1192_RS24140 () | 48852..49262 | - | 411 | WP_038355916.1 | type II secretion system pilot lipoprotein GspS-beta | - |
| C1192_RS24145 () | 49328..50137 | - | 810 | WP_038355915.1 | Leader peptidase PppA | VF |
| C1192_RS24150 () | 50329..54912 | - | 4584 | WP_038355914.1 | hypothetical protein | VF |
| C1192_RS24155 () | 55197..55904 | - | 708 | WP_038355913.1 | hypothetical protein | - |
| C1192_RS24160 () | 56692..58647 | - | 1956 | WP_103194841.1 | putative E3 ubiquitin-protein ligase ipaH7.8 | VF |
| C1192_RS24165 () | 59742..59984 | - | 243 | WP_103194832.1 | hypothetical protein | - |
| C1192_RS24170 () | 59997..61025 | - | 1029 | WP_038355821.1 | Surface presentation of antigens protein SpaS | VF |
| C1192_RS24175 () | 61033..61800 | - | 768 | WP_038355822.1 | Surface presentation of antigens protein SpaR | VF |
| C1192_RS24180 () | 61800..62060 | - | 261 | WP_038355823.1 | hypothetical protein | VF |
| C1192_RS24185 () | 62074..62724 | - | 651 | WP_038355824.1 | Surface presentation of antigens protein SpaP | VF |
| C1192_RS25240 () | 62714..63616 | - | 903 | WP_038355825.1 | Surface presentation of antigens protein SpaO | VF |
| C1192_RS24195 () | 63610..64518 | - | 909 | WP_038355826.1 | Surface presentation of antigens protein SpaN | VF |
| C1192_RS24205 () | 64939..66231 | - | 1293 | WP_038355827.1 | putative ATP synthase SpaL/MxiB | VF |
| C1192_RS24210 () | 66235..66636 | - | 402 | WP_038355852.1 | Surface presentation of antigens protein SpaK | VF |
| C1192_RS24215 () | 66648..68708 | - | 2061 | WP_038355828.1 | Protein MxiA | VF |
| C1192_RS24220 () | 68721..69794 | - | 1074 | WP_038355829.1 | Protein MxiC | VF |
| C1192_RS24225 () | 69814..71511 | - | 1698 | WP_038355830.1 | Outer membrane protein MxiD | VF |
| C1192_RS24230 () | 71498..72130 | - | 633 | WP_038355831.1 | Invasion protein InvF | VF |
| C1192_RS24235 () | 72257..72679 | - | 423 | WP_038355832.1 | Lipoprotein MxiM | VF |
| C1192_RS24240 () | 72663..73070 | - | 408 | WP_038355833.1 | hypothetical protein | VF |
| C1192_RS24245 () | 73045..73743 | - | 699 | WP_038355834.1 | Oxygen-regulated invasion protein OrgB | VF |
| C1192_RS24250 () | 73709..74230 | - | 522 | WP_038355835.1 | Oxygen-regulated invasion protein OrgA | VF |
| C1192_RS24255 () | 74235..74951 | - | 717 | WP_038355853.1 | Lipoprotein PrgK | VF |
| C1192_RS24260 () | 74957..75250 | - | 294 | WP_038355836.1 | hypothetical protein | VF |
| C1192_RS24265 () | 75264..75515 | - | 252 | WP_038355837.1 | Protein MxiH | VF |
| C1192_RS24270 () | 75526..76638 | - | 1113 | WP_038355838.1 | Protein MxiG | VF |
| C1192_RS24275 () | 76655..77104 | - | 450 | WP_038355839.1 | hypothetical protein | VF |
| C1192_RS24280 () | 77101..77466 | - | 366 | WP_038355840.1 | Chaperone protein IpgE | VF |
| C1192_RS24285 () | 77476..79089 | - | 1614 | WP_038355841.1 | Inositol phosphate phosphatase IpgD | VF |
| C1192_RS24290 () | 79399..80877 | + | 1479 | WP_038355842.1 | hypothetical protein | VF |
| C1192_RS24295 () | 80897..81286 | + | 390 | WP_038355843.1 | hypothetical protein | VF |
| C1192_RS24300 () | 81303..81929 | + | 627 | WP_038355854.1 | hypothetical protein | VF |
| C1192_RS24305 () | 82000..82467 | + | 468 | WP_038355844.1 | Chaperone protein IpgC | VF |
| C1192_RS24310 () | 82473..84209 | + | 1737 | WP_038355845.1 | Invasin IpaB | VF |
| C1192_RS24315 () | 84224..85312 | + | 1089 | WP_038355846.1 | Invasin IpaC | VF |
| C1192_RS24320 () | 85362..86357 | + | 996 | WP_038355847.1 | Invasin IpaD | VF |
| C1192_RS24325 () | 86366..90691 | + | 4326 | WP_103194843.1 | hypothetical protein | - |
| C1192_RS24330 () | 90694..90918 | + | 225 | WP_038355848.1 | Acyl carrier protein | VF |
| C1192_RS24335 () | 91123..92049 | + | 927 | WP_038355849.1 | ParB/RepB/Spo0J family partition protein | - |
| C1192_RS24345 () | 92756..94327 | - | 1572 | WP_001756948.1 | IS66 family transposase ISCro1 | Transposase |
| C1192_RS24350 () | 94347..94694 | - | 348 | WP_069906977.1 | IS66 family transposase ISCro1 | Transposase |
| C1192_RS24355 () | 94694..95349 | - | 656 | Protein_94 | IS66 family transposase ISCro1 | Transposase |
| C1192_RS24365 () | 95640..96460 | + | 821 | Protein_95 | IS3 family transposase | - |
| C1192_RS24370 () | 96582..97448 | - | 867 | WP_052463091.1 | E3 ubiquitin-protein ligase ipaH9.8 | VF |
| C1192_RS24375 () | 97460..98269 | - | 810 | WP_154663978.1 | E3 ubiquitin-protein ligase ipaH3 | VF |
| C1192_RS24380 () | 99150..99332 | + | 183 | WP_052463090.1 | hypothetical protein | VF |
| C1192_RS24385 () | 99386..99805 | + | 420 | WP_158650422.1 | hypothetical protein | - |
| C1192_RS24400 () | 100541..104637 | - | 4097 | Protein_100 | Serine protease SepA autotransporter | VF |
| C1192_RS24405 () | 105080..105943 | - | 864 | WP_038355998.1 | Effector protein YopJ | VF |
| C1192_RS24410 () | 106163..106282 | - | 120 | WP_077784613.1 | hypothetical protein | - |
| C1192_RS24420 () | 108221..117880 | + | 9660 | WP_038354815.1 | Toxin B | VF |
| C1192_RS24430 () | 118280..118957 | + | 678 | WP_103194836.1 | IS66 family transposase ISCro1 | Transposase |
| C1192_RS24435 () | 118957..119304 | + | 348 | WP_069906977.1 | IS66 family transposase ISCro1 | Transposase |
| C1192_RS24440 () | 119324..120895 | + | 1572 | WP_103194837.1 | IS66 family transposase ISCro1 | Transposase |
| C1192_RS24450 () | 121666..122290 | - | 625 | Protein_108 | IS21 family transposase ISSso4 | Transposase |
| C1192_RS24455 () | 122312..123637 | - | 1326 | Protein_109 | IS21 family transposase ISSso4 | Transposase |
| C1192_RS24460 () | 123757..124224 | - | 468 | WP_077784538.1 | IS4 family transposase ISAzvi7 | Transposase |
| C1192_RS24465 () | 124231..125172 | - | 942 | WP_077784539.1 | IS4 family transposase ISLpn6 | Transposase |
| C1192_RS24470 () | 125277..126427 | + | 1151 | WP_103194838.1 | IS3 family transposase ISEc16 | Transposase |
| C1192_RS24475 () | 126529..127230 | + | 702 | WP_052463022.1 | hypothetical protein | VF |
| C1192_RS24480 () | 127884..128720 | - | 837 | Protein_114 | IS3 family transposase ISEc16 | Transposase |
| C1192_RS24485 () | 128794..130002 | + | 1209 | WP_103194764.1 | IS256 family transposase IS1414 | Transposase |
| C1192_RS24490 () | 130041..130357 | - | 317 | Protein_116 | IS3 family transposase ISEc16 | Transposase |
| C1192_RS24495 () | 130412..130516 | + | 105 | Protein_117 | IS66 family insertion sequence element accessory protein TnpB | - |
| C1192_RS24500 () | 130601..131929 | + | 1329 | WP_103194760.1 | IS4 family transposase IS4 | Transposase |
| C1192_RS24505 () | 131943..132320 | + | 378 | Protein_119 | IS66 family transposase ISCro1 | Transposase |
| C1192_RS24510 () | 132320..132667 | + | 348 | WP_069906977.1 | IS66 family transposase ISCro1 | Transposase |
| C1192_RS24515 () | 132687..134258 | + | 1572 | WP_103194767.1 | IS66 family transposase ISCro1 | Transposase |
| C1192_RS24520 () | 134284..134672 | - | 389 | Protein_122 | IS1 family transposase IS1H | Transposase |
| C1192_RS24525 () | 134929..135921 | - | 993 | WP_038355965.1 | hypothetical protein | - |
| C1192_RS24530 () | 135943..136458 | - | 516 | WP_038355966.1 | Minor fimbrial protein PrsF | VF |
| C1192_RS24535 () | 136533..137090 | - | 558 | WP_038355967.1 | nuclease PIN | - |
| C1192_RS24540 () | 137126..137857 | - | 732 | WP_038355968.1 | Chaperone protein PapD | VF |
| C1192_RS24545 () | 137926..140457 | - | 2532 | WP_103194839.1 | Outer membrane usher protein PapC | VF |
| C1192_RS24550 () | 140621..141208 | - | 588 | WP_038355970.1 | PAP fimbrial minor pilin protein | VF |
| C1192_RS24555 () | 141288..141821 | - | 534 | WP_038355971.1 | Pap fimbrial major pilin protein | VF |
| C1192_RS24560 () | 142268..142573 | - | 306 | Protein_130 | helix-turn-helix domain-containing protein | - |
| C1192_RS24565 () | 142729..142950 | - | 222 | WP_038355972.1 | hypothetical protein | - |
| C1192_RS24570 () | 142950..144076 | - | 1127 | Protein_132 | Multifunctional conjugation protein TraI | Relaxase |
| C1192_RS24575 () | 144227..144557 | - | 331 | Protein_133 | conjugal transfer protein TraN | - |
| C1192_RS24580 () | 144636..144887 | + | 252 | WP_038355975.1 | type II toxin-antitoxin system Phd/YefM family antitoxin | - |
| C1192_RS24585 () | 144884..145174 | + | 291 | WP_038355976.1 | type II toxin-antitoxin system RelE/ParE family toxin | - |
| C1192_RS24590 () | 145246..145922 | + | 677 | Protein_136 | IS1 family transposase IS1H | Transposase |
| C1192_RS24595 () | 145971..146948 | - | 978 | WP_038355978.1 | ParB/RepB/Spo0J family partition protein | - |
| C1192_RS24600 () | 146945..148150 | - | 1206 | WP_038355979.1 | AAA family ATPase | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|