MGE detailed information
MGE type: Non-Mobilizable plasmid MGE length: 89313 bp
Accession: NZ_CP025944 Location: 1..89313 Organism: Escherichia coli strain SCEC020023 Replicon: plasmid pOXA10_020023
Accession: NZ_CP025944 Location: 1..89313 Organism: Escherichia coli strain SCEC020023 Replicon: plasmid pOXA10_020023
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| C1A20_RS00005 () | 1..861 | + | 861 | WP_001076427.1 | replication protein RepA | - |
| C1A20_RS00015 () | 1261..2466 | + | 1206 | WP_000817632.1 | Plasmid partition protein A | VF |
| C1A20_RS00020 () | 2463..3428 | + | 966 | WP_023338075.1 | ParB/RepB/Spo0J family partition protein | - |
| C1A20_RS00025 () | 3693..4688 | + | 996 | Protein_3 | hypothetical protein | - |
| C1A20_RS00030 () | 4800..5539 | + | 740 | Protein_4 | IS3 family transposase IS629 | Transposase |
| C1A20_RS00040 () | 6212..7720 | + | 1509 | WP_001189123.1 | group II intron reverse transcriptase/maturase | - |
| C1A20_RS00045 () | 7801..8277 | + | 477 | Protein_6 | IS3 family transposase ISEhe3 | Transposase |
| C1A20_RS00050 () | 8668..8859 | + | 192 | WP_001041614.1 | Rop family plasmid primer RNA-binding protein | - |
| C1A20_RS00055 () | 9347..9733 | + | 387 | WP_001039464.1 | hypothetical protein | - |
| C1A20_RS00065 () | 9873..10841 | - | 969 | WP_020956880.1 | IS5 family transposase IS903B | Transposase |
| C1A20_RS00075 () | 12022..12330 | - | 309 | Protein_10 | replication initiation protein | - |
| C1A20_RS00080 () | 12340..13037 | - | 698 | Protein_11 | IS1 family transposase | - |
| C1A20_RS00085 () | 13189..14676 | - | 1488 | WP_023300763.1 | group II intron reverse transcriptase/maturase | - |
| C1A20_RS00095 () | 15082..15513 | + | 432 | WP_000776034.1 | translesion error-prone DNA polymerase V autoproteolytic subunit | - |
| C1A20_RS00100 () | 15513..16784 | + | 1272 | WP_101975725.1 | Y-family DNA polymerase | - |
| C1A20_RS00105 () | 16866..17840 | - | 975 | WP_000064120.1 | ParB/RepB/Spo0J family partition protein | - |
| C1A20_RS00110 () | 17840..19045 | - | 1206 | WP_000368714.1 | AAA family ATPase | - |
| C1A20_RS00115 () | 19460..19729 | + | 270 | WP_072656591.1 | hypothetical protein | - |
| C1A20_RS00120 () | 20086..20913 | - | 828 | WP_000362086.1 | replication initiation protein | - |
| C1A20_RS00125 () | 21052..21240 | + | 189 | WP_000957857.1 | hypothetical protein | - |
| C1A20_RS00130 () | 21250..22449 | + | 1200 | WP_000948429.1 | IS91 family transposase ISSbo1 | Transposase |
| C1A20_RS25210 () | 23175..23279 | + | 105 | WP_032409716.1 | hypothetical protein | - |
| C1A20_RS00135 () | 23408..23665 | + | 258 | WP_000764642.1 | hypothetical protein | - |
| C1A20_RS00140 () | 23723..24499 | - | 777 | WP_000015958.1 | site-specific integrase | - |
| C1A20_RS00145 () | 24496..25239 | - | 744 | WP_000129823.1 | hypothetical protein | - |
| C1A20_RS00150 () | 25290..25640 | - | 351 | WP_000493378.1 | hypothetical protein | - |
| C1A20_RS00160 () | 26034..27107 | + | 1074 | WP_077890912.1 | type II toxin-antitoxin system RelB/DinJ family antitoxin | - |
| C1A20_RS00165 () | 27400..28314 | + | 915 | WP_052686739.1 | Abi family protein | - |
| C1A20_RS00170 () | 28569..28799 | + | 231 | WP_001261276.1 | AbrB/MazE/SpoVT family DNA-binding domain-containing protein | Antitoxin Detail |
| C1A20_RS00175 () | 28796..29212 | + | 417 | WP_044864680.1 | type II toxin-antitoxin system VapC family toxin | Toxin Detail |
| C1A20_RS00180 () | 29421..30437 | - | 1017 | WP_001310555.1 | IS5 family transposase IS5D | Transposase |
| C1A20_RS00185 () | 30602..33667 | - | 3066 | WP_000002334.1 | tetrathionate reductase subunit TtrA | - |
| C1A20_RS00190 () | 33660..34682 | - | 1023 | WP_044864557.1 | tetrathionate reductase subunit TtrC | - |
| C1A20_RS00195 () | 34683..35435 | - | 753 | WP_077910396.1 | tetrathionate reductase subunit TtrB | - |
| C1A20_RS00200 () | 35645..37378 | + | 1734 | WP_080950116.1 | Tetrathionate sensor histidine kinase TtrS | VF |
| C1A20_RS00205 () | 37353..37937 | + | 585 | WP_000974596.1 | Tetrathionate response regulatory protein TtrR | VF |
| C1A20_RS00210 () | 38030..38233 | + | 204 | WP_000528119.1 | fumarate hydratase FumD | - |
| C1A20_RS00215 () | 38342..39058 | - | 717 | Protein_37 | IS5 family transposase IS5D | Transposase |
| C1A20_RS00220 () | 39247..40803 | - | 1557 | WP_053897648.1 | Methyl-accepting chemotaxis protein McpQ | VF |
| C1A20_RS00225 () | 40828..41037 | + | 210 | Protein_39 | IS6 family transposase IS15DII | Transposase |
| C1A20_RS00230 () | 41068..41364 | + | 297 | Protein_40 | IS6 family transposase IS15DII | Transposase |
| C1A20_RS00235 () | 41595..41936 | - | 342 | WP_004202492.1 | Multiple antibiotic resistance protein MarA | VF |
| C1A20_RS00240 () | 42056..42304 | - | 249 | Protein_42 | IS1380 family transposase ISEcp1 | Transposase |
| C1A20_RS00260 () | 44493..45089 | - | 597 | WP_000583524.1 | Tn3 family transposase TnpR_TnShfr1 | Transposase |
| C1A20_RS00270 () | 45146..45850 | - | 705 | WP_001067855.1 | IS6 family transposase IS26 | Transposase |
| C1A20_RS00275 () | 45914..47527 | + | 1614 | Protein_45 | Tn3 family transposase ISEc63 | Transposase |
| C1A20_RS00280 () | 47578..48282 | - | 705 | WP_001067855.1 | IS6 family transposase IS26 | Transposase |
| C1A20_RS00285 () | 48529..49002 | - | 474 | WP_004201280.1 | Dihydrofolate reductase type 1 | ARG |
| C1A20_RS00290 () | 49077..49868 | - | 792 | WP_001209508.1 | Streptomycin 3''-adenylyltransferase | ARG |
| C1A20_RS00295 () | 49885..50685 | - | 801 | WP_000846390.1 | Beta-lactamase OXA-10 | ARG |
| C1A20_RS00305 () | 50950..52209 | - | 1260 | WP_012300772.1 | Bicyclomycin resistance protein | ARG |
| C1A20_RS00310 () | 52530..52982 | - | 453 | WP_000237816.1 | hypothetical protein | ARG |
| C1A20_RS00315 () | 53155..53646 | + | 492 | Protein_52 | IS91 family transposase ISAzo26 | Transposase |
| C1A20_RS00320 () | 53690..54394 | - | 705 | WP_001067855.1 | IS6 family transposase IS26 | Transposase |
| C1A20_RS00325 () | 54462..55820 | + | 1359 | Protein_54 | Tn3 family transposase TnpA_TnAs1 | Transposase |
| C1A20_RS00330 () | 55878..56120 | + | 243 | WP_000844627.1 | transposase | - |
| C1A20_RS00335 () | 56152..56802 | - | 651 | WP_038989485.1 | tetracycline resistance transcriptional repressor TetR(A) | - |
| C1A20_RS00340 () | 56908..58107 | + | 1200 | WP_000804064.1 | Tetracycline resistance protein, class C | ARG |
| C1A20_RS00345 () | 58139..59023 | - | 885 | WP_000058717.1 | EamA family transporter | - |
| C1A20_RS00350 () | 59115..59819 | - | 705 | WP_001067858.1 | IS6 family transposase IS15DI | Transposase |
| C1A20_RS00355 () | 59892..60116 | + | 225 | WP_000743213.1 | hypothetical protein | - |
| C1A20_RS00360 () | 60327..61820 | + | 1494 | WP_114481149.1 | IS91 family transposase ISVsa3 | Transposase |
| C1A20_RS25405 () | 62289..62735 | + | 447 | Protein_62 | DUF3363 domain-containing protein | - |
| C1A20_RS00370 () | 62952..64166 | + | 1215 | WP_058100717.1 | Bicyclomycin resistance protein | ARG |
| C1A20_RS00375 () | 64194..64499 | + | 306 | WP_001255015.1 | HTH-type transcriptional regulator CynR | VF |
| C1A20_RS00380 () | 64611..66104 | + | 1494 | WP_114481149.1 | IS91 family transposase ISVsa3 | Transposase |
| C1A20_RS00390 () | 66340..66582 | - | 243 | Protein_66 | phosphoglucosamine mutase | - |
| C1A20_RS00395 () | 66669..67484 | - | 816 | WP_001043260.1 | Dihydropteroate synthase | ARG |
| C1A20_RS00405 () | 67814..67990 | + | 177 | WP_000954592.1 | Arm DNA-binding domain-containing protein | - |
| C1A20_RS00410 () | 68172..68927 | - | 756 | Protein_69 | IS110 family transposase IS5075 | Transposase |
| C1A20_RS00415 () | 68980..69684 | - | 705 | WP_001067855.1 | IS6 family transposase IS26 | Transposase |
| C1A20_RS00420 () | 69748..70932 | + | 1185 | Protein_71 | cellulose biosynthesis protein BcsE | - |
| C1A20_RS00425 () | 70932..71129 | + | 198 | WP_002921518.1 | cellulose biosynthesis protein BcsF | - |
| C1A20_RS00430 () | 71126..72805 | + | 1680 | WP_101975717.1 | cellulose biosynthesis protein BcsG | - |
| C1A20_RS00435 () | 72913..73914 | - | 1002 | WP_101975716.1 | endoglucanase | - |
| C1A20_RS00440 () | 73926..74402 | - | 477 | WP_002921529.1 | hypothetical protein | - |
| C1A20_RS00445 () | 74402..78454 | - | 4053 | WP_023284374.1 | cellulose biosynthesis protein BcsC | - |
| C1A20_RS00450 () | 78451..80886 | - | 2436 | WP_101975715.1 | cellulose biosynthesis cyclic di-GMP-binding regulatory protein BcsB | - |
| C1A20_RS00455 () | 80883..82994 | - | 2112 | WP_050516608.1 | UDP-forming cellulose synthase catalytic subunit | - |
| C1A20_RS00460 () | 83014..83817 | - | 804 | WP_060568483.1 | Cellulose biosynthesis protein BcsQ | VF |
| C1A20_RS00465 () | 83808..84347 | - | 540 | WP_033545677.1 | cellulose biosynthesis protein BcsO | - |
| C1A20_RS00470 () | 84558..85538 | - | 981 | WP_072666959.1 | IS5 family transposase ISEc68 | Transposase |
| C1A20_RS00475 () | 85745..86026 | + | 282 | WP_021312774.1 | type II toxin-antitoxin system RelE/ParE family toxin | - |
| C1A20_RS00480 () | 86026..86328 | + | 303 | WP_001698908.1 | HigA family addiction module antidote protein | - |
| C1A20_RS00485 () | 86965..87933 | - | 969 | WP_103042701.1 | IS5 family transposase IS903B | Transposase |
| C1A20_RS00490 () | 87966..88520 | - | 555 | Protein_85 | IS30 family transposase IS30D | Transposase |
| C1A20_RS00500 () | 88588..88875 | - | 288 | Protein_86 | IS3 family transposase ISEc52 | Transposase |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|