MGE detailed information
MGE type: IScluster/Tn MGE length: 30198 bp
Accession: NZ_CP025921 Location: 6008..36205 Organism: Escherichia coli strain 103605 Replicon: plasmid p103605_146
Accession: NZ_CP025921 Location: 6008..36205 Organism: Escherichia coli strain 103605 Replicon: plasmid p103605_146
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| CXW53_RS25380 () | 2786..3397 | + | 612 | WP_000694232.1 | hypothetical protein | - |
| CXW53_RS25385 () | 3900..4085 | + | 186 | WP_001399373.1 | hypothetical protein | - |
| CXW53_RS25390 () | 4082..5203 | + | 1122 | WP_001399374.1 | hypothetical protein | - |
| CXW53_RS25395 () | 5311..5673 | + | 363 | Protein_5 | PerC family transcriptional regulator | - |
| CXW53_RS25400 () | 5582..5904 | + | 323 | Protein_6 | transposase | - |
| CXW53_RS25405 () | 6008..6265 | + | 258 | Protein_7 | IS3 family transposase IS911 | Transposase |
| CXW53_RS25410 () | 6333..7345 | + | 1013 | Protein_8 | IS30 family transposase IS30D | Transposase |
| CXW53_RS25415 () | 7436..9013 | - | 1578 | WP_126123792.1 | IS66 family transposase ISEc47 | Transposase |
| CXW53_RS25420 () | 9014..9301 | + | 288 | Protein_10 | IS3 family transposase IS911 | Transposase |
| CXW53_RS25425 () | 9314..10470 | - | 1157 | Protein_11 | IS30 family transposase IS30D | Transposase |
| CXW53_RS27225 () | 10538..10795 | - | 258 | Protein_12 | IS3 family transposase IS911 | Transposase |
| CXW53_RS25430 () | 11174..13633 | - | 2460 | WP_000978936.1 | CS6 fimbrial usher CssD | - |
| CXW53_RS25435 () | 13590..14288 | - | 699 | WP_000837510.1 | hypothetical protein | VF |
| CXW53_RS25440 () | 14341..14844 | - | 504 | WP_000913743.1 | CS6 fimbrial subunit CssB | - |
| CXW53_RS25445 () | 14862..15326 | - | 465 | WP_000750952.1 | hypothetical protein | VF |
| CXW53_RS25450 () | 15582..15809 | - | 228 | Protein_17 | IS5 family transposase IS903 | Transposase |
| CXW53_RS25455 () | 15968..16264 | + | 297 | WP_000766063.1 | hypothetical protein | - |
| CXW53_RS25460 () | 16264..17441 | + | 1178 | Protein_19 | IS91 family transposase ISEc37 | Transposase |
| CXW53_RS25465 () | 17819..18100 | - | 282 | WP_000780220.1 | helix-turn-helix transcriptional regulator | - |
| CXW53_RS25470 () | 18081..18410 | - | 330 | WP_000493287.1 | type II toxin-antitoxin system RelE/ParE family toxin | - |
| CXW53_RS25475 () | 18603..19021 | - | 419 | Protein_22 | IS3 family transposase ISBmu11 | Transposase |
| CXW53_RS25480 () | 19399..19617 | + | 219 | WP_013188501.1 | hypothetical protein | VF |
| CXW53_RS25485 () | 19768..19974 | + | 207 | Protein_24 | IS5 family transposase IS903B | Transposase |
| CXW53_RS25490 () | 20240..20593 | - | 354 | Protein_25 | IS66 family transposase ISEc43 | Transposase |
| CXW53_RS25495 () | 20582..21553 | + | 972 | Protein_26 | Multifunctional conjugation protein TraI | Relaxase |
| CXW53_RS25500 () | 21573..22319 | + | 747 | WP_000205720.1 | conjugal transfer pilus acetylase TraX | - |
| CXW53_RS25505 () | 22378..23238 | + | 861 | WP_000704522.1 | hypothetical protein | VF |
| CXW53_RS25510 () | 23341..23901 | + | 561 | WP_000840464.1 | fertility inhibition protein FinO | - |
| CXW53_RS25515 () | 24032..24241 | + | 210 | WP_001297500.1 | hypothetical protein | - |
| CXW53_RS25520 () | 24431..26002 | - | 1572 | WP_000381395.1 | IS66 family transposase ISCro1 | Transposase |
| CXW53_RS25525 () | 26022..26369 | - | 348 | WP_000624622.1 | IS66 family transposase ISCro1 | Transposase |
| CXW53_RS25530 () | 26369..27046 | - | 678 | WP_001711999.1 | IS66 family transposase ISCro1 | Transposase |
| CXW53_RS25545 () | 27536..28558 | + | 1023 | WP_001356151.1 | IS21 family transposase IS100kyp | Transposase |
| CXW53_RS25550 () | 28555..29337 | + | 783 | WP_001317493.1 | IS21 family transposase IS100kyp | Transposase |
| CXW53_RS25560 () | 29559..29906 | - | 348 | WP_000612626.1 | IS66 family transposase ISKpn24 | Transposase |
| CXW53_RS25565 () | 29903..30283 | - | 381 | WP_001466366.1 | IS66 family transposase ISEc8 | Transposase |
| CXW53_RS25570 () | 30640..31446 | - | 807 | WP_000099345.1 | site-specific integrase | - |
| CXW53_RS25575 () | 31447..31752 | - | 306 | WP_001159861.1 | type II toxin-antitoxin system toxin CcdB | Toxin Detail |
| CXW53_RS25580 () | 31754..31972 | - | 219 | WP_000813631.1 | type II toxin-antitoxin system antitoxin CcdA | Antitoxin Detail |
| CXW53_RS25590 () | 32527..33216 | + | 690 | WP_001095858.1 | helix-turn-helix domain-containing protein | - |
| CXW53_RS25595 () | 33250..33867 | - | 618 | WP_001398801.1 | RES family NAD+ phosphorylase | - |
| CXW53_RS25605 () | 34359..34589 | + | 231 | WP_001261281.1 | AbrB/MazE/SpoVT family DNA-binding domain-containing protein | Antitoxin Detail |
| CXW53_RS25610 () | 34586..35002 | + | 417 | WP_001044769.1 | type II toxin-antitoxin system VapC family toxin | Toxin Detail |
| CXW53_RS25615 () | 35178..36296 | + | 1119 | Protein_45 | IS3 family transposase ISEc17 | Transposase |
| CXW53_RS25620 () | 36760..38004 | + | 1245 | WP_000115575.1 | hypothetical protein | - |
| CXW53_RS25625 () | 38023..38172 | + | 150 | WP_001399277.1 | ATP-binding protein | - |
| CXW53_RS27385 () | 38566..38793 | - | 228 | WP_001731352.1 | bacterial lipid A biosynthesis acyltransferase family protein | - |
| CXW53_RS25635 () | 39045..39671 | - | 627 | WP_000593827.1 | ABC transporter ATP-binding protein | - |
| CXW53_RS25640 () | 39664..40437 | - | 774 | WP_021018664.1 | hypothetical protein | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|