MGE detailed information
MGE type: Prophage MGE length: 59105 bp
Accession: NZ_CP025920 Location: 4741636..4800740 Organism: Escherichia coli strain 103605 Replicon: chromosome
Accession: NZ_CP025920 Location: 4741636..4800740 Organism: Escherichia coli strain 103605 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| CXW53_RS23525 () | 4737885..4740311 | - | 2427 | WP_000041685.1 | dimethyl sulfoxide reductase subunit A | - |
| CXW53_RS23530 () | 4740510..4740815 | - | 306 | WP_001295396.1 | DUF1161 domain-containing protein | - |
| CXW53_RS23535 () | 4740923..4741633 | + | 711 | WP_001321287.1 | YnfC family lipoprotein | - |
| CXW53_RS23540 () | 4741636..4742196 | - | 561 | WP_001138581.1 | spermidine N1-acetyltransferase | - |
| CXW53_RS23545 () | 4742231..4742572 | - | 342 | WP_000705214.1 | DUF1283 family protein | - |
| CXW53_RS23550 () | 4742707..4743033 | + | 327 | WP_000598292.1 | YnfA family protein | - |
| CXW53_RS23555 () | 4743239..4744453 | + | 1215 | WP_001295394.1 | starvation-sensing protein RspA | - |
| CXW53_RS23560 () | 4744465..4745484 | + | 1020 | WP_000836079.1 | Zn-dependent oxidoreductase | - |
| CXW53_RS23570 () | 4745672..4746967 | - | 1296 | WP_001355842.1 | Putative defective protein IntQ ; Integrase | Integrase |
| CXW53_RS23575 () | 4746987..4747238 | - | 252 | WP_000005552.1 | excisionase family protein | - |
| CXW53_RS23580 () | 4747308..4749788 | - | 2481 | WP_000048591.1 | exonuclease | - |
| CXW53_RS23585 () | 4749868..4750071 | - | 204 | WP_001090551.1 | DUF1482 family protein | - |
| CXW53_RS23590 () | 4750068..4750256 | - | 189 | WP_000449194.1 | cell division inhibition protein DicB | - |
| CXW53_RS23600 () | 4750825..4751043 | - | 219 | WP_001171952.1 | hypothetical protein | - |
| CXW53_RS23605 () | 4751203..4751358 | - | 156 | WP_071608135.1 | DUF1391 family protein | - |
| CXW53_RS23610 () | 4751631..4752347 | - | 717 | WP_000103684.1 | helix-turn-helix domain-containing protein | - |
| CXW53_RS23615 () | 4752397..4752612 | + | 216 | WP_000471549.1 | transcriptional regulator | - |
| CXW53_RS23620 () | 4752609..4753034 | + | 426 | WP_000693850.1 | Rha family transcriptional regulator | - |
| CXW53_RS23625 () | 4753106..4754176 | + | 1071 | WP_001262391.1 | DNA-binding protein | - |
| CXW53_RS23630 () | 4754217..4754639 | + | 423 | WP_001151151.1 | DUF977 family protein | - |
| CXW53_RS23640 () | 4756145..4756927 | - | 783 | WP_126130100.1 | IS21 family transposase IS100kyp | Transposase |
| CXW53_RS23645 () | 4756924..4757946 | - | 1023 | WP_001356151.1 | IS21 family transposase IS100kyp | Transposase |
| CXW53_RS23655 () | 4758200..4760197 | + | 1998 | WP_005032116.1 | choline BCCT transporter BetT | - |
| CXW53_RS23665 () | 4760261..4761538 | + | 1278 | WP_000625667.1 | DUF2254 domain-containing protein | - |
| CXW53_RS23670 () | 4761821..4762516 | - | 696 | WP_032190252.1 | hypothetical protein | - |
| CXW53_RS23675 () | 4762519..4763025 | - | 507 | WP_000130123.1 | hypothetical protein | - |
| CXW53_RS23680 () | 4763022..4763852 | - | 831 | WP_001399639.1 | Sporulation initiation inhibitor protein Soj | VF |
| - () | 4764796..4764854 | - | 59 | - | - | Antitoxin Detail |
| CXW53_RS23695 () | 4764866..4765021 | + | 156 | WP_000813254.1 | type I toxin-antitoxin system toxin HokD | Toxin Detail |
| CXW53_RS23700 () | 4765188..4765466 | + | 279 | WP_001410105.1 | hypothetical protein | - |
| CXW53_RS23705 () | 4765468..4766514 | + | 1047 | WP_001265103.1 | DUF968 domain-containing protein | - |
| CXW53_RS23710 () | 4766527..4766898 | + | 372 | WP_001217451.1 | RusA family crossover junction endodeoxyribonuclease | - |
| CXW53_RS23715 () | 4766888..4767241 | + | 354 | WP_000532207.1 | antitermination protein Q | - |
| CXW53_RS23720 () | 4767448..4768731 | - | 1284 | WP_000123148.1 | hypothetical protein | - |
| CXW53_RS23725 () | 4768988..4769182 | + | 195 | WP_001355891.1 | hypothetical protein | - |
| CXW53_RS23730 () | 4769332..4770378 | + | 1047 | WP_000799652.1 | site-specific DNA-methyltransferase | - |
| CXW53_RS23750 () | 4771448..4771840 | + | 393 | WP_001398932.1 | phage holin | - |
| CXW53_RS23755 () | 4771830..4772108 | + | 279 | WP_001398933.1 | phage holin family protein | - |
| CXW53_RS23760 () | 4772110..4772655 | + | 546 | WP_000836754.1 | glycoside hydrolase family 108 protein | - |
| CXW53_RS23765 () | 4772875..4772988 | + | 114 | WP_001305859.1 | hypothetical protein | - |
| CXW53_RS27215 () | 4773017..4773172 | + | 156 | WP_001138277.1 | hypothetical protein | - |
| CXW53_RS23770 () | 4773344..4773637 | - | 294 | WP_000738421.1 | increased serum survival lipoprotein Iss | - |
| CXW53_RS23775 () | 4773998..4774192 | - | 195 | WP_001415975.1 | YlcI/YnfO family protein | - |
| CXW53_RS23780 () | 4774581..4775126 | + | 546 | WP_000453576.1 | DNA-packaging protein | - |
| CXW53_RS23785 () | 4775101..4776516 | + | 1416 | WP_095908821.1 | phage terminase large subunit family protein | - |
| CXW53_RS23790 () | 4776437..4778008 | - | 1572 | WP_000381395.1 | IS66 family transposase ISCro1 | Transposase |
| CXW53_RS23795 () | 4778028..4778375 | - | 348 | WP_000624622.1 | IS66 family transposase ISCro1 | Transposase |
| CXW53_RS23800 () | 4778375..4779052 | - | 678 | WP_001711999.1 | IS66 family transposase ISCro1 | Transposase |
| CXW53_RS23805 () | 4779119..4779733 | + | 615 | WP_071597534.1 | phage terminase large subunit family protein | - |
| CXW53_RS23810 () | 4779730..4779936 | + | 207 | WP_000198149.1 | gpW family protein | - |
| CXW53_RS23815 () | 4779933..4781534 | + | 1602 | WP_001355924.1 | phage portal protein | - |
| CXW53_RS23820 () | 4781515..4782834 | + | 1320 | WP_000123336.1 | S49 family peptidase | - |
| CXW53_RS23825 () | 4782844..4783176 | + | 333 | WP_001299443.1 | head decoration protein | - |
| CXW53_RS23830 () | 4783232..4784257 | + | 1026 | WP_000063254.1 | major capsid protein | - |
| CXW53_RS23835 () | 4784299..4784685 | + | 387 | WP_000158859.1 | DNA-packaging protein FI | - |
| CXW53_RS23840 () | 4784697..4785050 | + | 354 | WP_000752994.1 | head-tail joining protein | - |
| CXW53_RS23845 () | 4785062..4785640 | + | 579 | WP_000985130.1 | phage tail protein | - |
| CXW53_RS23850 () | 4785637..4786032 | + | 396 | WP_000683119.1 | phage minor tail U family protein | - |
| CXW53_RS23855 () | 4786040..4786780 | + | 741 | WP_001711723.1 | phage tail protein | - |
| CXW53_RS23860 () | 4786796..4787218 | + | 423 | WP_000479153.1 | phage minor tail protein G | - |
| CXW53_RS23865 () | 4787200..4787634 | + | 435 | WP_000459458.1 | phage tail assembly protein T | - |
| CXW53_RS23870 () | 4787627..4790206 | + | 2580 | WP_000840312.1 | phage tail tape measure protein | - |
| CXW53_RS23875 () | 4790203..4790532 | + | 330 | WP_000847379.1 | phage tail protein | - |
| CXW53_RS23880 () | 4790532..4791230 | + | 699 | WP_001152639.1 | phage minor tail protein L | - |
| CXW53_RS23885 () | 4791236..4791979 | + | 744 | WP_001725868.1 | C40 family peptidase | - |
| CXW53_RS23890 () | 4791916..4792518 | + | 603 | WP_000090844.1 | tail assembly protein | - |
| CXW53_RS23895 () | 4792579..4795974 | + | 3396 | WP_095908820.1 | host specificity protein J | - |
| CXW53_RS23900 () | 4796042..4796641 | + | 600 | WP_001233545.1 | Outer membrane protein X | VF |
| CXW53_RS23905 () | 4796706..4798460 | + | 1755 | Protein_4569 | prophage tail fiber N-terminal domain-containing protein | - |
| CXW53_RS23910 () | 4798671..4799237 | + | 567 | WP_001165996.1 | DUF4376 domain-containing protein | - |
| CXW53_RS23915 () | 4799320..4799397 | - | 78 | Protein_4571 | DinI family protein | - |
| CXW53_RS23920 () | 4799457..4800740 | + | 1284 | Protein_4572 | MHS family MFS transporter YdfJ | - |
| CXW53_RS23925 () | 4800829..4802289 | + | 1461 | WP_126130101.1 | mannitol dehydrogenase family protein | - |
| CXW53_RS23930 () | 4802325..4802528 | - | 204 | WP_000214712.1 | putative selenium delivery protein YdfZ | - |
| CXW53_RS23935 () | 4802706..4803392 | - | 687 | WP_000215549.1 | DNA-binding transcriptional regulator YdfH | - |
| CXW53_RS23940 () | 4803481..4804227 | - | 747 | WP_000636571.1 | bifunctional NADP-dependent 3-hydroxy acid dehydrogenase/3-hydroxypropionate dehydrogenase YdfG | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|