MGE detailed information
MGE type: Prophage MGE length: 56503 bp
Accession: NZ_CP025920 Location: 171127..227629 Organism: Escherichia coli strain 103605 Replicon: chromosome
Accession: NZ_CP025920 Location: 171127..227629 Organism: Escherichia coli strain 103605 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| CXW53_RS00975 () | 166174..166845 | + | 672 | WP_001265481.1 | two-component system response regulator PhoP | - |
| CXW53_RS00980 () | 166845..168305 | + | 1461 | WP_000735412.1 | two-component system sensor histidine kinase PhoQ | - |
| CXW53_RS00985 () | 168381..169502 | + | 1122 | WP_001295435.1 | [50S ribosomal protein L16]-arginine 3-hydroxylase | - |
| CXW53_RS00990 () | 169648..170877 | - | 1230 | WP_000359463.1 | peptidase T | - |
| CXW53_RS00995 () | 171127..172263 | + | 1137 | WP_000531601.1 | Spermidine/putrescine import ATP-binding protein PotA | VF |
| CXW53_RS01000 () | 172247..173110 | + | 864 | WP_000799406.1 | spermidine/putrescine ABC transporter permease PotB | - |
| CXW53_RS01005 () | 173343..173609 | - | 267 | WP_000937496.1 | tail fiber assembly protein | - |
| CXW53_RS01010 () | 173666..174334 | + | 669 | WP_126123768.1 | class I SAM-dependent methyltransferase | - |
| CXW53_RS01020 () | 174389..174973 | - | 585 | WP_000885577.1 | tail fiber assembly protein | - |
| CXW53_RS01025 () | 174973..178386 | - | 3414 | WP_095908818.1 | prophage tail fiber N-terminal domain-containing protein | - |
| CXW53_RS01030 () | 178451..179050 | - | 600 | WP_001462065.1 | Outer membrane protein X | VF |
| CXW53_RS01035 () | 179118..182597 | - | 3480 | WP_126130058.1 | host specificity protein J | - |
| CXW53_RS01040 () | 182658..183305 | - | 648 | WP_000741576.1 | tail assembly protein | - |
| CXW53_RS01045 () | 183203..183946 | - | 744 | WP_001462126.1 | C40 family peptidase | - |
| CXW53_RS01050 () | 183951..184649 | - | 699 | WP_001152385.1 | phage minor tail protein L | - |
| CXW53_RS01055 () | 184659..184988 | - | 330 | WP_000447253.1 | phage tail protein | - |
| CXW53_RS01060 () | 184988..188044 | - | 3057 | WP_001460656.1 | phage tail tape measure protein | - |
| CXW53_RS01065 () | 188016..188345 | - | 330 | WP_001161009.1 | phage tail assembly protein T | - |
| CXW53_RS01070 () | 188354..188740 | - | 387 | WP_001298500.1 | phage minor tail protein G | - |
| CXW53_RS01075 () | 188801..189544 | - | 744 | WP_000211121.1 | phage tail protein | - |
| CXW53_RS01080 () | 189555..189956 | - | 402 | WP_001464346.1 | phage minor tail U family protein | - |
| CXW53_RS01085 () | 189953..190543 | - | 591 | WP_001398416.1 | phage tail protein | - |
| CXW53_RS01090 () | 190555..190830 | - | 276 | WP_001283153.1 | DNA breaking-rejoining protein | - |
| CXW53_RS01095 () | 190823..191146 | - | 324 | WP_001097045.1 | DUF2190 family protein | - |
| CXW53_RS01100 () | 191233..193260 | - | 2028 | WP_024169733.1 | ATP-dependent Clp protease proteolytic subunit | VF |
| CXW53_RS01105 () | 193238..194713 | - | 1476 | WP_001460789.1 | phage portal protein | - |
| CXW53_RS01110 () | 194713..194925 | - | 213 | WP_001072975.1 | hypothetical protein | - |
| CXW53_RS01115 () | 194922..196222 | - | 1301 | Protein_212 | phage terminase large subunit family protein | - |
| CXW53_RS01120 () | 196259..196936 | + | 678 | WP_001339397.1 | IS66 family transposase ISCro1 | Transposase |
| CXW53_RS01125 () | 196936..197283 | + | 348 | WP_000624622.1 | IS66 family transposase ISCro1 | Transposase |
| CXW53_RS01130 () | 197303..198874 | + | 1572 | WP_001743889.1 | IS66 family transposase ISCro1 | Transposase |
| CXW53_RS01135 () | 198928..199728 | - | 801 | Protein_216 | phage terminase large subunit family protein | - |
| CXW53_RS01140 () | 199737..200276 | - | 540 | WP_000421824.1 | DUF1441 family protein | - |
| CXW53_RS01150 () | 200857..201249 | - | 393 | WP_000415817.1 | hypothetical protein | - |
| CXW53_RS27060 () | 201424..201579 | - | 156 | WP_001138287.1 | hypothetical protein | - |
| CXW53_RS01155 () | 201608..201721 | - | 114 | WP_001297666.1 | hypothetical protein | - |
| CXW53_RS01160 () | 201854..202231 | - | 378 | WP_001117825.1 | M15 family metallopeptidase | - |
| CXW53_RS01165 () | 202234..202509 | - | 276 | WP_000950576.1 | phage holin family protein | - |
| CXW53_RS01170 () | 202499..202891 | - | 393 | WP_001297664.1 | holin | - |
| CXW53_RS01190 () | 203383..204432 | - | 1050 | WP_000611206.1 | site-specific DNA-methyltransferase | - |
| CXW53_RS01195 () | 204583..204780 | - | 198 | WP_000917767.1 | hypothetical protein | - |
| CXW53_RS01200 () | 205093..205635 | - | 543 | WP_001398904.1 | DUF1133 family protein | - |
| CXW53_RS01205 () | 205644..206009 | - | 366 | WP_001297842.1 | RusA family crossover junction endodeoxyribonuclease | - |
| CXW53_RS01210 () | 206010..207065 | - | 1056 | WP_001502278.1 | DUF968 domain-containing protein | - |
| CXW53_RS01215 () | 207067..207345 | - | 279 | WP_023607105.1 | hypothetical protein | - |
| CXW53_RS01220 () | 207412..207672 | - | 261 | WP_000701918.1 | hypothetical protein | - |
| CXW53_RS01225 () | 207873..208358 | - | 486 | WP_000818165.1 | type II toxin-antitoxin system death-on-curing family toxin | - |
| CXW53_RS01230 () | 208377..208556 | - | 180 | WP_001277775.1 | hypothetical protein | - |
| CXW53_RS01235 () | 208772..208927 | - | 156 | WP_000813254.1 | type I toxin-antitoxin system toxin HokD | Toxin Detail |
| - () | 208939..208997 | + | 59 | - | - | Antitoxin Detail |
| CXW53_RS01240 () | 209219..209641 | - | 423 | WP_000160146.1 | hypothetical protein | - |
| CXW53_RS01245 () | 209745..210157 | - | 413 | Protein_235 | DUF4406 domain-containing protein | - |
| CXW53_RS01250 () | 210160..210441 | - | 282 | WP_001509842.1 | hypothetical protein | - |
| CXW53_RS01255 () | 210474..211235 | - | 762 | WP_126130059.1 | DUF1627 domain-containing protein | - |
| CXW53_RS01260 () | 211257..212003 | - | 747 | WP_000788772.1 | ATP-binding protein | - |
| CXW53_RS01265 () | 212009..212974 | - | 966 | WP_000054517.1 | hypothetical protein | - |
| CXW53_RS01270 () | 212955..213476 | - | 522 | WP_000705382.1 | hypothetical protein | - |
| CXW53_RS01275 () | 213460..213687 | - | 228 | WP_000476985.1 | transcriptional regulator | - |
| CXW53_RS01280 () | 213765..214172 | + | 408 | WP_001003379.1 | helix-turn-helix domain-containing protein | - |
| CXW53_RS01285 () | 214362..214517 | + | 156 | WP_000379575.1 | DUF1391 family protein | - |
| CXW53_RS01290 () | 214677..214895 | + | 219 | WP_001171921.1 | hypothetical protein | - |
| CXW53_RS01295 () | 214918..215325 | + | 408 | WP_000394517.1 | hypothetical protein | - |
| CXW53_RS01300 () | 215303..215536 | - | 234 | WP_000920491.1 | hypothetical protein | - |
| CXW53_RS01310 () | 216103..216291 | + | 189 | WP_000449198.1 | hypothetical protein | - |
| CXW53_RS01315 () | 216288..216491 | + | 204 | WP_001090252.1 | DUF1482 family protein | - |
| CXW53_RS01320 () | 216571..219042 | + | 2472 | WP_001398899.1 | exonuclease | - |
| CXW53_RS01325 () | 219104..219373 | + | 270 | WP_000003742.1 | excisionase | - |
| CXW53_RS01330 () | 219342..220460 | + | 1119 | WP_001403676.1 | hypothetical protein ; Integrase | Integrase |
| CXW53_RS01335 () | 220627..221421 | + | 795 | WP_000580316.1 | spermidine/putrescine ABC transporter permease PotC | - |
| CXW53_RS01340 () | 221418..222464 | + | 1047 | WP_000759318.1 | spermidine/putrescine ABC transporter substrate-binding protein PotD | - |
| CXW53_RS01345 () | 222522..222983 | + | 462 | WP_001341497.1 | DUF3592 domain-containing protein | - |
| CXW53_RS01350 () | 222980..223768 | + | 789 | WP_000713472.1 | TPM domain-containing protein | - |
| CXW53_RS01355 () | 223907..224728 | - | 822 | WP_000952736.1 | NAD-dependent protein deacylase | - |
| CXW53_RS01360 () | 224744..225655 | - | 912 | WP_000291270.1 | N-acetylglucosamine kinase | - |
| CXW53_RS01365 () | 225684..226928 | - | 1245 | WP_001251348.1 | lipoprotein-releasing ABC transporter permease subunit LolE | - |
| CXW53_RS01370 () | 226928..227629 | - | 702 | WP_001033694.1 | Lipoprotein-releasing system ATP-binding protein LolD | VF |
| CXW53_RS01375 () | 227622..228821 | - | 1200 | WP_000284709.1 | lipoprotein-releasing ABC transporter permease subunit LolC | - |
| CXW53_RS01380 () | 229083..230156 | + | 1074 | WP_000810250.1 | acyltransferase family protein | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|