MGE detailed information
MGE type: Conjugative plasmid MGE length: 50268 bp
Accession: NZ_CP025919 Location: 1..50268 Organism: Escherichia coli strain 120899 Replicon: plasmid p120899_50
Accession: NZ_CP025919 Location: 1..50268 Organism: Escherichia coli strain 120899 Replicon: plasmid p120899_50
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| CXW56_RS27045 () | 2032..2334 | - | 303 | WP_001096511.1 | hypothetical protein | - |
| CXW56_RS27050 () | 2424..3083 | - | 660 | WP_000516232.1 | peptidyl-arginine deiminase | - |
| CXW56_RS27055 () | 3636..3959 | + | 324 | WP_000432873.1 | hypothetical protein | - |
| CXW56_RS27060 () | 4313..4657 | + | 345 | WP_001146936.1 | type II toxin-antitoxin system RelE/ParE family toxin | - |
| CXW56_RS27065 () | 4644..4994 | + | 351 | WP_000127482.1 | addiction module antitoxin | - |
| CXW56_RS27075 () | 5828..6343 | + | 516 | WP_001025393.1 | J domain-containing protein | - |
| CXW56_RS27080 () | 6447..6989 | + | 543 | WP_001083909.1 | hypothetical protein | - |
| CXW56_RS27085 () | 6986..7240 | + | 255 | WP_001230709.1 | hypothetical protein | Toxin Detail |
| CXW56_RS27090 () | 7237..7479 | + | 243 | WP_000151456.1 | hypothetical protein | Antitoxin Detail |
| CXW56_RS27100 () | 8050..8343 | + | 294 | WP_000673431.1 | hypothetical protein | - |
| CXW56_RS27105 () | 8648..8935 | + | 288 | WP_000606467.1 | hypothetical protein | - |
| CXW56_RS27110 () | 9363..9596 | + | 234 | WP_000093745.1 | hypothetical protein | - |
| CXW56_RS27115 () | 9672..9974 | + | 303 | WP_000379301.1 | hypothetical protein | - |
| CXW56_RS27120 () | 10210..10395 | + | 186 | Protein_14 | hypothetical protein | - |
| CXW56_RS27125 () | 10506..11327 | + | 822 | WP_032283064.1 | DUF945 domain-containing protein | - |
| CXW56_RS27130 () | 11624..12271 | - | 648 | WP_072144024.1 | hypothetical protein | VF |
| CXW56_RS27135 () | 12547..12930 | + | 384 | WP_001151529.1 | relaxosome protein TraM | - |
| CXW56_RS27140 () | 13122..13769 | + | 648 | WP_000332523.1 | transcriptional regulator TraJ family protein | - |
| CXW56_RS27145 () | 13877..14116 | + | 240 | WP_042018283.1 | conjugal transfer relaxosome protein TraY | - |
| CXW56_RS27150 () | 14150..14512 | + | 363 | WP_001098993.1 | type IV conjugative transfer system pilin TraA | - |
| CXW56_RS27155 () | 14527..14838 | + | 312 | WP_000012100.1 | type IV conjugative transfer system protein TraL | - |
| CXW56_RS27160 () | 14860..15426 | + | 567 | WP_000399780.1 | type IV conjugative transfer system protein TraE | - |
| CXW56_RS27165 () | 15413..16141 | + | 729 | WP_001230771.1 | type-F conjugative transfer system secretin TraK | - |
| CXW56_RS27170 () | 16141..17592 | + | 1452 | WP_016235429.1 | conjugal transfer protein TraB | - |
| CXW56_RS27175 () | 17561..18148 | + | 588 | WP_001309238.1 | conjugal transfer protein TraP | - |
| CXW56_RS27180 () | 18102..18452 | + | 351 | WP_071586941.1 | conjugal transfer protein TrbD | - |
| CXW56_RS27185 () | 18452..18967 | + | 516 | WP_000809872.1 | type IV conjugative transfer system lipoprotein TraV | - |
| CXW56_RS27190 () | 19102..19323 | + | 222 | WP_001278695.1 | conjugal transfer protein TraR | - |
| CXW56_RS27195 () | 19316..19729 | + | 414 | WP_000549581.1 | hypothetical protein | - |
| CXW56_RS27200 () | 19722..20195 | + | 474 | WP_001620797.1 | hypothetical protein | - |
| CXW56_RS27205 () | 20273..20491 | + | 219 | WP_001377841.1 | hypothetical protein | - |
| CXW56_RS27210 () | 20519..20866 | + | 348 | WP_000836682.1 | hypothetical protein | - |
| CXW56_RS27215 () | 20992..23622 | + | 2631 | WP_001535744.1 | type IV secretion system protein TraC | - |
| CXW56_RS27220 () | 23619..24005 | + | 387 | WP_000214084.1 | type-F conjugative transfer system protein TrbI | - |
| CXW56_RS27225 () | 24002..24634 | + | 633 | WP_001203738.1 | type-F conjugative transfer system protein TraW | - |
| CXW56_RS27230 () | 24631..25623 | + | 993 | WP_000830838.1 | conjugal transfer pilus assembly protein TraU | - |
| CXW56_RS27235 () | 25653..25958 | + | 306 | WP_000224418.1 | hypothetical protein | - |
| CXW56_RS27240 () | 25967..26605 | + | 639 | WP_001080251.1 | type-F conjugative transfer system pilin assembly protein TrbC | - |
| CXW56_RS27245 () | 26602..28452 | + | 1851 | WP_032240955.1 | type-F conjugative transfer system mating-pair stabilization protein TraN | - |
| CXW56_RS27250 () | 28479..28736 | + | 258 | WP_000864347.1 | conjugal transfer protein TrbE | - |
| CXW56_RS27255 () | 28729..29472 | + | 744 | WP_001462109.1 | type-F conjugative transfer system pilin assembly protein TraF | - |
| CXW56_RS27260 () | 29486..29827 | + | 342 | WP_000556795.1 | conjugal transfer protein TrbA | - |
| CXW56_RS27265 () | 29808..30143 | - | 336 | WP_001620807.1 | hypothetical protein | - |
| CXW56_RS27270 () | 30224..30508 | + | 285 | WP_042017850.1 | type-F conjugative transfer system pilin chaperone TraQ | - |
| CXW56_RS27275 () | 30495..31040 | + | 546 | WP_000059830.1 | type-F conjugative transfer system pilin assembly thiol-disulfide isomerase TrbB | - |
| CXW56_RS27280 () | 30970..31344 | + | 375 | WP_071589535.1 | P-type conjugative transfer protein TrbJ | - |
| CXW56_RS27285 () | 31265..31690 | + | 426 | WP_071589536.1 | F-type conjugal transfer protein TrbF | - |
| CXW56_RS27290 () | 31677..33050 | + | 1374 | WP_001535740.1 | conjugal transfer protein TraH | - |
| CXW56_RS27295 () | 33047..35893 | + | 2847 | WP_050009856.1 | conjugal transfer mating pair stabilization protein TraG | - |
| CXW56_RS27300 () | 35890..36399 | + | 510 | WP_000628099.1 | conjugal transfer entry exclusion protein TraS | - |
| CXW56_RS27305 () | 36413..37144 | + | 732 | WP_042018826.1 | complement resistance protein TraT | - |
| CXW56_RS27310 () | 37347..38084 | + | 738 | WP_000199909.1 | hypothetical protein | - |
| CXW56_RS27315 () | 38135..40324 | + | 2190 | WP_126134455.1 | type IV conjugative transfer system coupling protein TraD | - |
| CXW56_RS27320 () | 40324..45594 | + | 5271 | WP_126134456.1 | Multifunctional conjugation protein TraI | Relaxase |
| CXW56_RS27325 () | 45643..46062 | + | 420 | WP_000451342.1 | hypothetical protein | - |
| CXW56_RS27330 () | 46084..46818 | + | 735 | WP_000432273.1 | conjugal transfer pilus acetylase TraX | - |
| CXW56_RS27335 () | 46873..47433 | + | 561 | WP_000139346.1 | fertility inhibition protein FinO | - |
| CXW56_RS27340 () | 47565..47777 | + | 213 | WP_001301409.1 | ANR family transcriptional regulator | - |
| CXW56_RS27345 () | 48023..48484 | + | 462 | WP_001233850.1 | thermonuclease family protein | - |
| CXW56_RS27350 () | 48530..48739 | + | 210 | WP_001353639.1 | transcriptional regulator | - |
| CXW56_RS27355 () | 48777..49367 | + | 591 | WP_000766827.1 | DUF2726 domain-containing protein | - |
| CXW56_RS27360 () | 49607..49855 | + | 249 | WP_000083839.1 | replication regulatory protein RepA | - |
| CXW56_RS27370 () | 50100..50174 | + | 75 | WP_011387702.1 | RepA leader peptide Tap | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|