MGE detailed information
MGE type: IScluster/Tn MGE length: 30198 bp
Accession: NZ_CP025917 Location: 72855..103052 Organism: Escherichia coli strain 120899 Replicon: plasmid p120899_146
Accession: NZ_CP025917 Location: 72855..103052 Organism: Escherichia coli strain 120899 Replicon: plasmid p120899_146
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| CXW56_RS25925 () | 69633..70244 | + | 612 | WP_000694232.1 | hypothetical protein | - |
| CXW56_RS25930 () | 70747..70932 | + | 186 | WP_001399373.1 | hypothetical protein | - |
| CXW56_RS25935 () | 70929..72050 | + | 1122 | WP_001399374.1 | hypothetical protein | - |
| CXW56_RS25940 () | 72158..72520 | + | 363 | Protein_89 | PerC family transcriptional regulator | - |
| CXW56_RS25945 () | 72429..72751 | + | 323 | Protein_90 | transposase | - |
| CXW56_RS25950 () | 72855..73112 | + | 258 | Protein_91 | transposase | - |
| CXW56_RS25955 () | 73180..74192 | + | 1013 | Protein_92 | IS30-like element IS30 family transposase | - |
| CXW56_RS25960 () | 74283..75860 | - | 1578 | WP_126123792.1 | IS66-like element ISEc47 family transposase | - |
| CXW56_RS25965 () | 75861..76148 | + | 288 | Protein_94 | transposase | - |
| CXW56_RS25970 () | 76161..77317 | - | 1157 | Protein_95 | IS30-like element IS30 family transposase | - |
| CXW56_RS27585 () | 77385..77642 | - | 258 | Protein_96 | transposase | - |
| CXW56_RS25975 () | 78021..80480 | - | 2460 | WP_000978936.1 | CS6 fimbrial usher CssD | - |
| CXW56_RS25980 () | 80437..81135 | - | 699 | WP_000837510.1 | CS6 fimbrial biogenesis chaperone CssC | - |
| CXW56_RS25985 () | 81188..81691 | - | 504 | WP_000913743.1 | CS6 fimbrial subunit CssB | - |
| CXW56_RS25990 () | 81709..82173 | - | 465 | WP_000750952.1 | CS6 fimbrial subunit CssA | - |
| CXW56_RS25995 () | 82429..82656 | - | 228 | Protein_101 | IS5/IS1182 family transposase | - |
| CXW56_RS26000 () | 82746..83111 | + | 366 | WP_001665141.1 | hypothetical protein | - |
| CXW56_RS26005 () | 83111..84288 | + | 1178 | Protein_103 | IS91 family transposase | - |
| CXW56_RS26010 () | 84666..84947 | - | 282 | WP_000780220.1 | helix-turn-helix transcriptional regulator | - |
| CXW56_RS26015 () | 84928..85257 | - | 330 | WP_000493287.1 | type II toxin-antitoxin system RelE/ParE family toxin | - |
| CXW56_RS26020 () | 85450..85868 | - | 419 | Protein_106 | transposase | - |
| CXW56_RS26025 () | 86246..86464 | + | 219 | WP_013188501.1 | heat-stable enterotoxin ST-I group b | - |
| CXW56_RS26030 () | 86615..86821 | + | 207 | Protein_108 | transposase | - |
| CXW56_RS26035 () | 87087..87440 | - | 354 | Protein_109 | transposase | - |
| CXW56_RS26040 () | 87429..88400 | + | 972 | Protein_110 | conjugative transfer relaxase/helicase TraI | - |
| CXW56_RS26045 () | 88420..89166 | + | 747 | WP_000205720.1 | conjugal transfer pilus acetylase TraX | - |
| CXW56_RS26050 () | 89225..90085 | + | 861 | WP_000704522.1 | alpha/beta hydrolase | - |
| CXW56_RS26055 () | 90188..90748 | + | 561 | WP_000840464.1 | fertility inhibition protein FinO | - |
| CXW56_RS26060 () | 90879..91088 | + | 210 | WP_001297500.1 | hypothetical protein | - |
| CXW56_RS26065 () | 91278..92849 | - | 1572 | WP_000381395.1 | IS66 family transposase | - |
| CXW56_RS26070 () | 92869..93216 | - | 348 | WP_000624622.1 | IS66 family insertion sequence element accessory protein TnpB | - |
| CXW56_RS26075 () | 93216..93893 | - | 678 | WP_001711999.1 | IS66 family insertion sequence hypothetical protein | - |
| CXW56_RS26090 () | 94383..95405 | + | 1023 | WP_001356151.1 | IS21 family transposase | - |
| CXW56_RS26095 () | 95402..96184 | + | 783 | WP_001317493.1 | IS21-like element IS100kyp family helper ATPase IstB | - |
| CXW56_RS26105 () | 96406..96753 | - | 348 | WP_000612626.1 | IS66 family insertion sequence element accessory protein TnpB | - |
| CXW56_RS26110 () | 96750..97130 | - | 381 | WP_001466366.1 | IS66 family insertion sequence hypothetical protein | - |
| CXW56_RS26115 () | 97487..98293 | - | 807 | WP_000099345.1 | site-specific integrase | - |
| CXW56_RS26120 () | 98294..98599 | - | 306 | WP_001159861.1 | type II toxin-antitoxin system toxin CcdB | Toxin Detail |
| CXW56_RS26125 () | 98601..98819 | - | 219 | WP_000813631.1 | type II toxin-antitoxin system antitoxin CcdA | Antitoxin Detail |
| CXW56_RS26135 () | 99374..100063 | + | 690 | WP_001095858.1 | helix-turn-helix domain-containing protein | - |
| CXW56_RS26140 () | 100097..100714 | - | 618 | WP_001398801.1 | RES family NAD+ phosphorylase | - |
| CXW56_RS26150 () | 101206..101436 | + | 231 | WP_001261281.1 | AbrB/MazE/SpoVT family DNA-binding domain-containing protein | Antitoxin Detail |
| CXW56_RS26155 () | 101433..101849 | + | 417 | WP_001044769.1 | type II toxin-antitoxin system VapC family toxin | Toxin Detail |
| CXW56_RS26160 () | 102025..103143 | + | 1119 | Protein_129 | IS3 family transposase | - |
| CXW56_RS26165 () | 103607..104851 | + | 1245 | WP_000115575.1 | hypothetical protein | - |
| CXW56_RS26170 () | 104870..105019 | + | 150 | WP_001399277.1 | ATP-binding protein | - |
| CXW56_RS27730 () | 105413..105640 | - | 228 | WP_001731352.1 | bacterial lipid A biosynthesis acyltransferase family protein | - |
| CXW56_RS26180 () | 105892..106518 | - | 627 | WP_000593827.1 | ABC transporter ATP-binding protein | - |
| CXW56_RS26185 () | 106511..107284 | - | 774 | WP_021018664.1 | hypothetical protein | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|