MGE detailed information
MGE type: Mobilizable plasmid MGE length: 146395 bp
Accession: NZ_CP025917 Location: 1..146395 Organism: Escherichia coli strain 120899 Replicon: plasmid p120899_146
Accession: NZ_CP025917 Location: 1..146395 Organism: Escherichia coli strain 120899 Replicon: plasmid p120899_146
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| CXW56_RS25410 () | 1..858 | - | 858 | WP_000130987.1 | incFII family plasmid replication initiator RepA | - |
| CXW56_RS25415 () | 851..925 | - | 75 | WP_057113837.1 | RepA leader peptide Tap | - |
| CXW56_RS25425 () | 1170..1418 | - | 249 | WP_000083840.1 | replication regulatory protein RepA | - |
| CXW56_RS25430 () | 1658..2248 | - | 591 | WP_000766827.1 | DUF2726 domain-containing protein | - |
| CXW56_RS25435 () | 2286..2495 | - | 210 | WP_001353639.1 | transcriptional regulator | - |
| CXW56_RS25440 () | 2541..3002 | - | 462 | WP_001233850.1 | thermonuclease family protein | - |
| CXW56_RS25445 () | 3248..3460 | - | 213 | WP_001301409.1 | ANR family transcriptional regulator | - |
| CXW56_RS25450 () | 3515..5128 | - | 1614 | WP_001744949.1 | IS66-like element ISEc47 family transposase | - |
| CXW56_RS25455 () | 5159..5509 | - | 351 | WP_000624688.1 | IS66 family insertion sequence element accessory protein TnpB | - |
| CXW56_RS25460 () | 5506..5940 | - | 435 | WP_001403014.1 | IS66 family insertion sequence hypothetical protein | - |
| CXW56_RS25465 () | 6027..6176 | - | 150 | Protein_10 | conjugal transfer protein TraP | - |
| CXW56_RS25470 () | 6166..7617 | - | 1452 | WP_000146678.1 | conjugal transfer protein TraB | - |
| CXW56_RS25475 () | 7617..8345 | - | 729 | WP_001230779.1 | type-F conjugative transfer system secretin TraK | - |
| CXW56_RS25480 () | 8332..8898 | - | 567 | WP_000399780.1 | type IV conjugative transfer system protein TraE | - |
| CXW56_RS25485 () | 8920..9231 | - | 312 | WP_001117572.1 | type IV conjugative transfer system protein TraL | - |
| CXW56_RS25490 () | 9236..9598 | - | 363 | WP_001098986.1 | type IV conjugative transfer system pilin TraA | - |
| CXW56_RS25495 () | 9631..9858 | - | 228 | WP_000089263.1 | conjugal transfer relaxosome protein TraY | - |
| CXW56_RS25500 () | 9995..10666 | - | 672 | WP_000283565.1 | conjugal transfer transcriptional regulator TraJ | - |
| CXW56_RS25505 () | 10860..11243 | - | 384 | WP_000124827.1 | relaxosome protein TraM | - |
| CXW56_RS25515 () | 11566..12168 | + | 603 | WP_000243715.1 | transglycosylase SLT domain-containing protein | - |
| CXW56_RS25520 () | 12465..13286 | - | 822 | WP_001234442.1 | DUF945 domain-containing protein | - |
| CXW56_RS25525 () | 13397..13693 | - | 297 | WP_001272251.1 | hypothetical protein | - |
| CXW56_RS27725 () | 13990..14350 | + | 361 | Protein_22 | hypothetical protein | - |
| CXW56_RS25545 () | 14588..14749 | - | 162 | WP_001332444.1 | type I toxin-antitoxin system Hok family toxin | - |
| - () | 14802..15001 | - | 200 | NuclAT_0 | - | - |
| - () | 14802..15001 | - | 200 | NuclAT_0 | - | - |
| - () | 14802..15001 | - | 200 | NuclAT_0 | - | - |
| - () | 14802..15001 | - | 200 | NuclAT_0 | - | - |
| CXW56_RS25550 () | 14958..15272 | - | 315 | WP_000872086.1 | hypothetical protein | - |
| CXW56_RS25555 () | 15269..15988 | - | 720 | WP_000994094.1 | plasmid SOS inhibition protein A | - |
| CXW56_RS25560 () | 15985..16419 | - | 435 | WP_000845950.1 | conjugation system SOS inhibitor PsiB | - |
| CXW56_RS25570 () | 16474..18438 | - | 1965 | Protein_27 | ParB/RepB/Spo0J family partition protein | - |
| CXW56_RS25575 () | 18502..18735 | - | 234 | WP_000005971.1 | DUF905 domain-containing protein | - |
| CXW56_RS25580 () | 18792..19319 | - | 528 | WP_000290803.1 | single-stranded DNA-binding protein | - |
| CXW56_RS25595 () | 19621..19987 | + | 367 | Protein_30 | hypothetical protein | - |
| CXW56_RS25600 () | 20014..21585 | - | 1572 | WP_000381456.1 | IS66-like element IS679 family transposase | - |
| CXW56_RS25605 () | 21605..21952 | - | 348 | WP_000624618.1 | IS66 family insertion sequence element accessory protein TnpB | - |
| CXW56_RS25610 () | 21952..22602 | - | 651 | WP_001399514.1 | IS66 family insertion sequence hypothetical protein | - |
| CXW56_RS25615 () | 22682..22759 | + | 78 | Protein_34 | pilus assembly protein | - |
| CXW56_RS25625 () | 22845..23408 | - | 564 | WP_001297832.1 | class I SAM-dependent methyltransferase | - |
| CXW56_RS25630 () | 23455..24816 | - | 1362 | WP_000170657.1 | DUF3560 domain-containing protein | - |
| CXW56_RS25635 () | 24868..25098 | - | 231 | WP_000218642.1 | hypothetical protein | - |
| CXW56_RS27570 () | 25615..25863 | + | 249 | WP_001403191.1 | hypothetical protein | - |
| CXW56_RS25650 () | 26498..28165 | + | 1668 | WP_001091723.1 | group II intron reverse transcriptase/maturase | - |
| CXW56_RS25655 () | 28478..28669 | - | 192 | WP_001024838.1 | hypothetical protein | - |
| CXW56_RS25660 () | 28666..29088 | - | 423 | WP_000271732.1 | DUF1380 family protein | - |
| CXW56_RS25665 () | 29135..29437 | - | 303 | WP_001666994.1 | antirestriction protein | - |
| CXW56_RS25675 () | 29975..30745 | - | 771 | WP_001006237.1 | hypothetical protein | - |
| CXW56_RS25680 () | 30790..31344 | - | 555 | WP_077764356.1 | DUF1380 family protein | - |
| CXW56_RS25685 () | 31238..31459 | - | 222 | WP_001104871.1 | hypothetical protein | - |
| CXW56_RS25690 () | 31460..32143 | - | 684 | WP_000086125.1 | DNA methylase | - |
| CXW56_RS25695 () | 32219..32530 | - | 312 | WP_021018648.1 | hypothetical protein | - |
| CXW56_RS25700 () | 32527..33429 | - | 903 | WP_001440221.1 | DUF1281 domain-containing protein | - |
| CXW56_RS25715 () | 33964..34926 | + | 963 | WP_000959884.1 | plasmid segregation protein ParM | - |
| CXW56_RS25720 () | 34929..35279 | + | 351 | WP_001365718.1 | plasmid partitioning/stability family protein | - |
| CXW56_RS25725 () | 35392..35706 | - | 315 | Protein_51 | transposase | - |
| CXW56_RS25730 () | 35828..36133 | - | 306 | WP_001355931.1 | hypothetical protein | - |
| CXW56_RS25735 () | 36168..36647 | - | 480 | Protein_53 | Tn3 family transposase | - |
| CXW56_RS25740 () | 36711..37829 | + | 1119 | Protein_54 | IS3 family transposase | - |
| CXW56_RS25745 () | 37870..38316 | + | 447 | Protein_55 | reverse transcriptase | - |
| CXW56_RS25750 () | 38384..38563 | + | 180 | Protein_56 | transposase domain-containing protein | - |
| CXW56_RS25755 () | 38985..39188 | - | 204 | WP_024169330.1 | ANR family transcriptional regulator | - |
| CXW56_RS25760 () | 39398..40201 | + | 804 | WP_000346360.1 | helix-turn-helix transcriptional regulator | - |
| CXW56_RS25765 () | 40353..40592 | + | 240 | Protein_59 | hypothetical protein | - |
| CXW56_RS25770 () | 40777..41471 | + | 695 | WP_085949098.1 | IS1 family transposase | - |
| CXW56_RS25780 () | 42243..43457 | - | 1215 | WP_001398483.1 | IS4 family transposase | - |
| CXW56_RS25785 () | 43773..44633 | - | 861 | WP_000588734.1 | helix-turn-helix domain-containing protein | - |
| CXW56_RS25795 () | 44909..45127 | + | 219 | Protein_63 | helix-turn-helix domain-containing protein | - |
| CXW56_RS25800 () | 45075..45458 | - | 384 | WP_000762576.1 | hypothetical protein | - |
| CXW56_RS25805 () | 45574..45921 | + | 348 | WP_000142434.1 | hypothetical protein | - |
| CXW56_RS25810 () | 45939..46529 | - | 591 | WP_001674494.1 | hypothetical protein | - |
| CXW56_RS25820 () | 46825..48396 | - | 1572 | WP_000381395.1 | IS66 family transposase | - |
| CXW56_RS25825 () | 48416..48763 | - | 348 | WP_000624622.1 | IS66 family insertion sequence element accessory protein TnpB | - |
| CXW56_RS25830 () | 48763..49440 | - | 678 | WP_001711999.1 | IS66 family insertion sequence hypothetical protein | - |
| CXW56_RS25840 () | 49688..53782 | - | 4095 | WP_001045016.1 | serine protease autotransporter toxin EatA | - |
| CXW56_RS25845 () | 54581..55912 | - | 1332 | WP_001658347.1 | group II intron reverse transcriptase/maturase | - |
| CXW56_RS25850 () | 56415..56827 | - | 413 | Protein_72 | Tn3 family transposase | - |
| CXW56_RS27580 () | 56920..57219 | - | 300 | WP_001433774.1 | transposase | - |
| CXW56_RS25860 () | 57239..58852 | - | 1614 | WP_001744949.1 | IS66-like element ISEc47 family transposase | - |
| CXW56_RS25865 () | 58883..59260 | - | 378 | WP_126130110.1 | IS66 family insertion sequence element accessory protein TnpB | - |
| CXW56_RS25870 () | 59262..60475 | + | 1214 | WP_139371347.1 | IS3 family transposase | - |
| CXW56_RS25880 () | 60543..60977 | - | 435 | WP_001403014.1 | IS66 family insertion sequence hypothetical protein | - |
| CXW56_RS25885 () | 61059..62265 | - | 1207 | Protein_78 | IS3 family transposase | - |
| CXW56_RS25890 () | 62412..62732 | - | 321 | Protein_79 | helix-turn-helix domain-containing protein | - |
| CXW56_RS25895 () | 62866..63885 | + | 1020 | WP_000878037.1 | IS110 family transposase | - |
| CXW56_RS25900 () | 64462..65159 | + | 698 | Protein_81 | IS1 family transposase | - |
| CXW56_RS25905 () | 65258..65625 | + | 368 | Protein_82 | IS3 family transposase | - |
| CXW56_RS25910 () | 65833..66444 | + | 612 | WP_000739895.1 | CS5 fimbrial major subunit CsfA | - |
| CXW56_RS25915 () | 66502..67176 | + | 675 | WP_000699813.1 | hypothetical protein | - |
| CXW56_RS25920 () | 67173..69617 | + | 2445 | WP_001399372.1 | TcfC E-set like domain-containing protein | - |
| CXW56_RS25925 () | 69633..70244 | + | 612 | WP_000694232.1 | hypothetical protein | - |
| CXW56_RS25930 () | 70747..70932 | + | 186 | WP_001399373.1 | hypothetical protein | - |
| CXW56_RS25935 () | 70929..72050 | + | 1122 | WP_001399374.1 | hypothetical protein | - |
| CXW56_RS25940 () | 72158..72520 | + | 363 | Protein_89 | PerC family transcriptional regulator | - |
| CXW56_RS25945 () | 72429..72751 | + | 323 | Protein_90 | transposase | - |
| CXW56_RS25950 () | 72855..73112 | + | 258 | Protein_91 | transposase | - |
| CXW56_RS25955 () | 73180..74192 | + | 1013 | Protein_92 | IS30-like element IS30 family transposase | - |
| CXW56_RS25960 () | 74283..75860 | - | 1578 | WP_126123792.1 | IS66-like element ISEc47 family transposase | - |
| CXW56_RS25965 () | 75861..76148 | + | 288 | Protein_94 | transposase | - |
| CXW56_RS25970 () | 76161..77317 | - | 1157 | Protein_95 | IS30-like element IS30 family transposase | - |
| CXW56_RS27585 () | 77385..77642 | - | 258 | Protein_96 | transposase | - |
| CXW56_RS25975 () | 78021..80480 | - | 2460 | WP_000978936.1 | CS6 fimbrial usher CssD | - |
| CXW56_RS25980 () | 80437..81135 | - | 699 | WP_000837510.1 | CS6 fimbrial biogenesis chaperone CssC | - |
| CXW56_RS25985 () | 81188..81691 | - | 504 | WP_000913743.1 | CS6 fimbrial subunit CssB | - |
| CXW56_RS25990 () | 81709..82173 | - | 465 | WP_000750952.1 | CS6 fimbrial subunit CssA | - |
| CXW56_RS25995 () | 82429..82656 | - | 228 | Protein_101 | IS5/IS1182 family transposase | - |
| CXW56_RS26000 () | 82746..83111 | + | 366 | WP_001665141.1 | hypothetical protein | - |
| CXW56_RS26005 () | 83111..84288 | + | 1178 | Protein_103 | IS91 family transposase | - |
| CXW56_RS26010 () | 84666..84947 | - | 282 | WP_000780220.1 | helix-turn-helix transcriptional regulator | - |
| CXW56_RS26015 () | 84928..85257 | - | 330 | WP_000493287.1 | type II toxin-antitoxin system RelE/ParE family toxin | - |
| CXW56_RS26020 () | 85450..85868 | - | 419 | Protein_106 | transposase | - |
| CXW56_RS26025 () | 86246..86464 | + | 219 | WP_013188501.1 | heat-stable enterotoxin ST-I group b | - |
| CXW56_RS26030 () | 86615..86821 | + | 207 | Protein_108 | transposase | - |
| CXW56_RS26035 () | 87087..87440 | - | 354 | Protein_109 | transposase | - |
| CXW56_RS26040 () | 87429..88400 | + | 972 | Protein_110 | conjugative transfer relaxase/helicase TraI | - |
| CXW56_RS26045 () | 88420..89166 | + | 747 | WP_000205720.1 | conjugal transfer pilus acetylase TraX | - |
| CXW56_RS26050 () | 89225..90085 | + | 861 | WP_000704522.1 | alpha/beta hydrolase | - |
| CXW56_RS26055 () | 90188..90748 | + | 561 | WP_000840464.1 | fertility inhibition protein FinO | - |
| CXW56_RS26060 () | 90879..91088 | + | 210 | WP_001297500.1 | hypothetical protein | - |
| CXW56_RS26065 () | 91278..92849 | - | 1572 | WP_000381395.1 | IS66 family transposase | - |
| CXW56_RS26070 () | 92869..93216 | - | 348 | WP_000624622.1 | IS66 family insertion sequence element accessory protein TnpB | - |
| CXW56_RS26075 () | 93216..93893 | - | 678 | WP_001711999.1 | IS66 family insertion sequence hypothetical protein | - |
| CXW56_RS26090 () | 94383..95405 | + | 1023 | WP_001356151.1 | IS21 family transposase | - |
| CXW56_RS26095 () | 95402..96184 | + | 783 | WP_001317493.1 | IS21-like element IS100kyp family helper ATPase IstB | - |
| CXW56_RS26105 () | 96406..96753 | - | 348 | WP_000612626.1 | IS66 family insertion sequence element accessory protein TnpB | - |
| CXW56_RS26110 () | 96750..97130 | - | 381 | WP_001466366.1 | IS66 family insertion sequence hypothetical protein | - |
| CXW56_RS26115 () | 97487..98293 | - | 807 | WP_000099345.1 | site-specific integrase | - |
| CXW56_RS26120 () | 98294..98599 | - | 306 | WP_001159861.1 | type II toxin-antitoxin system toxin CcdB | Toxin Detail |
| CXW56_RS26125 () | 98601..98819 | - | 219 | WP_000813631.1 | type II toxin-antitoxin system antitoxin CcdA | Antitoxin Detail |
| CXW56_RS26135 () | 99374..100063 | + | 690 | WP_001095858.1 | helix-turn-helix domain-containing protein | - |
| CXW56_RS26140 () | 100097..100714 | - | 618 | WP_001398801.1 | RES family NAD+ phosphorylase | - |
| CXW56_RS26150 () | 101206..101436 | + | 231 | WP_001261281.1 | AbrB/MazE/SpoVT family DNA-binding domain-containing protein | Antitoxin Detail |
| CXW56_RS26155 () | 101433..101849 | + | 417 | WP_001044769.1 | type II toxin-antitoxin system VapC family toxin | Toxin Detail |
| CXW56_RS26160 () | 102025..103143 | + | 1119 | Protein_129 | IS3 family transposase | - |
| CXW56_RS26165 () | 103607..104851 | + | 1245 | WP_000115575.1 | hypothetical protein | - |
| CXW56_RS26170 () | 104870..105019 | + | 150 | WP_001399277.1 | ATP-binding protein | - |
| CXW56_RS27730 () | 105413..105640 | - | 228 | WP_001731352.1 | bacterial lipid A biosynthesis acyltransferase family protein | - |
| CXW56_RS26180 () | 105892..106518 | - | 627 | WP_000593827.1 | ABC transporter ATP-binding protein | - |
| CXW56_RS26185 () | 106511..107284 | - | 774 | WP_021018664.1 | hypothetical protein | - |
| CXW56_RS26190 () | 107241..108446 | - | 1206 | WP_001399279.1 | TolC family protein | - |
| CXW56_RS26195 () | 108443..109582 | - | 1140 | WP_000336105.1 | hypothetical protein | - |
| CXW56_RS26200 () | 109865..110215 | - | 351 | WP_071594470.1 | hypothetical protein | - |
| CXW56_RS26205 () | 110370..110750 | + | 381 | Protein_138 | transposase | - |
| CXW56_RS26210 () | 110786..111028 | + | 243 | Protein_139 | transposase domain-containing protein | - |
| CXW56_RS26215 () | 111201..111434 | + | 234 | Protein_140 | transposase domain-containing protein | - |
| CXW56_RS26225 () | 112704..112886 | + | 183 | Protein_142 | IS3 family transposase | - |
| CXW56_RS27595 () | 113115..113878 | - | 764 | Protein_143 | hypothetical protein | - |
| CXW56_RS26240 () | 113891..114391 | - | 501 | WP_000528933.1 | hypothetical protein | - |
| CXW56_RS26245 () | 114436..115974 | - | 1539 | WP_000998068.1 | IS66 family transposase | - |
| CXW56_RS26250 () | 116024..116371 | - | 348 | WP_000612591.1 | IS66 family insertion sequence element accessory protein TnpB | - |
| CXW56_RS26255 () | 116368..116748 | - | 381 | WP_001171554.1 | IS66 family insertion sequence hypothetical protein | - |
| CXW56_RS26260 () | 116827..117609 | - | 783 | WP_001317493.1 | IS21-like element IS100kyp family helper ATPase IstB | - |
| CXW56_RS26265 () | 117606..118628 | - | 1023 | WP_001356151.1 | IS21 family transposase | - |
| CXW56_RS26270 () | 118715..119092 | + | 378 | Protein_150 | hypothetical protein | - |
| CXW56_RS26275 () | 119371..121251 | + | 1881 | WP_021018667.1 | colicin IA | - |
| CXW56_RS26280 () | 121273..121608 | - | 336 | WP_001080730.1 | colicin 1A immunity protein | - |
| CXW56_RS26285 () | 121737..122084 | + | 348 | WP_000142443.1 | hypothetical protein | - |
| CXW56_RS26290 () | 122569..123126 | + | 558 | WP_001398382.1 | recombinase family protein | - |
| CXW56_RS26295 () | 123157..124983 | + | 1827 | WP_001239408.1 | AAA family ATPase | - |
| CXW56_RS26300 () | 125142..126164 | + | 1023 | WP_001398381.1 | IS110 family transposase | - |
| CXW56_RS26305 () | 126459..126575 | + | 117 | Protein_157 | plasmid stabilization protein | - |
| CXW56_RS26310 () | 126677..127669 | - | 993 | WP_001398380.1 | hypothetical protein | - |
| CXW56_RS27600 () | 127718..127873 | - | 156 | WP_000074142.1 | hypothetical protein | - |
| CXW56_RS26325 () | 128806..129069 | - | 264 | WP_000063166.1 | hypothetical protein | - |
| CXW56_RS26330 () | 129209..129367 | - | 159 | Protein_161 | topoisomerase C-terminal repeat-containing protein | - |
| CXW56_RS26335 () | 129513..130423 | - | 911 | Protein_162 | type VI secretion protein | - |
| CXW56_RS26340 () | 130428..130760 | - | 333 | WP_001173923.1 | hypothetical protein | - |
| CXW56_RS26345 () | 130938..131078 | - | 141 | WP_000078916.1 | Hok/Gef family protein | - |
| CXW56_RS26350 () | 131269..131529 | - | 261 | WP_000488107.1 | ogr/Delta-like zinc finger family protein | - |
| CXW56_RS26355 () | 131572..131970 | - | 399 | Protein_166 | hypothetical protein | - |
| CXW56_RS26360 () | 132081..133412 | - | 1332 | WP_001658347.1 | group II intron reverse transcriptase/maturase | - |
| CXW56_RS26365 () | 134223..134912 | + | 690 | WP_000796232.1 | hypothetical protein | - |
| CXW56_RS26370 () | 134909..135706 | + | 798 | WP_000016490.1 | site-specific integrase | - |
| CXW56_RS26375 () | 135844..136119 | - | 276 | WP_000239529.1 | hypothetical protein | - |
| CXW56_RS26380 () | 136113..136757 | - | 645 | WP_000633916.1 | AAA family ATPase | - |
| CXW56_RS26385 () | 136986..137957 | + | 972 | WP_001103696.1 | hypothetical protein | - |
| CXW56_RS26390 () | 137962..138354 | + | 393 | WP_000340828.1 | plasmid partitioning/stability family protein | - |
| CXW56_RS26395 () | 138359..138610 | - | 252 | Protein_174 | DUF4113 domain-containing protein | - |
| CXW56_RS26400 () | 138640..140211 | - | 1572 | WP_001745416.1 | IS66 family transposase | - |
| CXW56_RS26405 () | 140231..140578 | - | 348 | WP_000624622.1 | IS66 family insertion sequence element accessory protein TnpB | - |
| CXW56_RS26410 () | 140578..141255 | - | 678 | WP_001711999.1 | IS66 family insertion sequence hypothetical protein | - |
| CXW56_RS26420 () | 141309..142454 | + | 1146 | Protein_178 | IS66 family transposase | - |
| CXW56_RS27735 () | 142493..142741 | - | 249 | Protein_179 | hypothetical protein | - |
| CXW56_RS26435 () | 143095..143697 | + | 603 | WP_000517689.1 | hypothetical protein | - |
| CXW56_RS27740 () | 144349..144894 | - | 546 | WP_000926983.1 | hypothetical protein | - |
| CXW56_RS26460 () | 144904..145191 | - | 288 | WP_000222775.1 | type II toxin-antitoxin system RelE/ParE family toxin | - |
| CXW56_RS26465 () | 145188..145439 | - | 252 | WP_001139207.1 | plasmid stabilization protein | - |
| CXW56_RS27605 () | 145526..145693 | - | 168 | WP_000841011.1 | hypothetical protein | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|