MGE detailed information
MGE type: Prophage MGE length: 23378 bp
Accession: NZ_CP025916 Location: 39..23416 Organism: Escherichia coli strain 120899 Replicon: chromosome
Accession: NZ_CP025916 Location: 39..23416 Organism: Escherichia coli strain 120899 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| CXW56_RS00010 () | 514..1060 | - | 547 | Protein_1 | terminase small subunit | - |
| CXW56_RS00025 () | 1562..1746 | - | 185 | Protein_2 | Rz1 family lipoprotein | - |
| CXW56_RS00035 () | 2263..2796 | - | 534 | WP_000992067.1 | lysozyme | - |
| CXW56_RS00050 () | 3139..3482 | - | 344 | Protein_4 | YdfR family protein | - |
| CXW56_RS00055 () | 3487..3702 | - | 216 | WP_000372595.1 | class II holin family protein | - |
| CXW56_RS27375 () | 3850..4011 | - | 162 | WP_001355909.1 | hypothetical protein | - |
| CXW56_RS00060 () | 4008..4196 | - | 189 | WP_000874243.1 | DUF1737 domain-containing protein | - |
| CXW56_RS00065 () | 4457..4791 | + | 335 | Protein_8 | anti-adapter protein IraM | - |
| CXW56_RS00070 () | 5072..5203 | - | 132 | WP_000562553.1 | DUF3927 family protein | - |
| CXW56_RS00090 () | 6099..6920 | - | 822 | WP_000762892.1 | antitermination protein | - |
| CXW56_RS00095 () | 6917..7297 | - | 381 | WP_000140028.1 | RusA family crossover junction endodeoxyribonuclease | - |
| CXW56_RS00100 () | 7298..8356 | - | 1059 | WP_001736257.1 | DUF968 domain-containing protein | - |
| CXW56_RS00105 () | 8358..8636 | - | 279 | WP_001410105.1 | hypothetical protein | - |
| CXW56_RS00110 () | 8803..8958 | - | 156 | WP_000813254.1 | type I toxin-antitoxin system toxin HokD | Toxin Detail |
| - () | 8970..9028 | + | 59 | - | - | Antitoxin Detail |
| CXW56_RS00120 () | 9583..10392 | + | 810 | WP_000161640.1 | hypothetical protein | - |
| CXW56_RS00125 () | 10539..10961 | - | 423 | WP_001151221.1 | DUF977 family protein | - |
| CXW56_RS00130 () | 11002..12072 | - | 1071 | WP_089516821.1 | phage replisome organizer | - |
| CXW56_RS00135 () | 12144..12569 | - | 426 | WP_000693867.1 | Rha family transcriptional regulator | - |
| CXW56_RS00140 () | 12553..12795 | - | 243 | WP_000747951.1 | hypothetical protein | - |
| CXW56_RS00145 () | 13187..13525 | + | 339 | WP_001397087.1 | peptidase S24-like family protein | - |
| CXW56_RS00150 () | 13818..13973 | + | 156 | WP_071608135.1 | DUF1391 family protein | - |
| CXW56_RS00155 () | 14133..14351 | + | 219 | WP_001171952.1 | hypothetical protein | - |
| CXW56_RS00165 () | 14920..15108 | + | 189 | WP_000449172.1 | cell division inhibitor | - |
| CXW56_RS00170 () | 15105..15293 | + | 189 | WP_000199480.1 | DUF1482 family protein | - |
| CXW56_RS00175 () | 15389..17860 | + | 2472 | WP_001745181.1 | exonuclease | - |
| CXW56_RS00180 () | 17925..18173 | + | 249 | WP_000113189.1 | excisionase | - |
| CXW56_RS00185 () | 18151..19281 | + | 1131 | WP_000113701.1 | hypothetical protein ; Integrase | Integrase |
| CXW56_RS00190 () | 19327..19965 | - | 639 | WP_000737224.1 | outer membrane protein OmpW | - |
| CXW56_RS00195 () | 20205..20294 | + | 90 | Protein_29 | YkgJ family cysteine cluster protein | - |
| CXW56_RS00200 () | 20322..21065 | + | 744 | WP_000028540.1 | envelope biogenesis factor ElyC | - |
| CXW56_RS00205 () | 21095..21634 | + | 540 | WP_000808667.1 | septation protein A | - |
| CXW56_RS00210 () | 21739..22137 | + | 399 | WP_000108160.1 | acyl-CoA thioester hydrolase YciA | - |
| CXW56_RS00215 () | 22177..22896 | - | 720 | WP_001376357.1 | TonB system transport protein TonB | - |
| CXW56_RS00220 () | 23120..23416 | + | 297 | WP_000967595.1 | YciI family protein | - |
| CXW56_RS00225 () | 23715..24968 | + | 1254 | WP_001299682.1 | voltage-gated potassium channel protein | - |
| CXW56_RS00230 () | 25023..25196 | - | 174 | WP_001309467.1 | YciY family protein | - |
| CXW56_RS00235 () | 25339..26799 | + | 1461 | WP_000214516.1 | cardiolipin synthase | - |
| CXW56_RS00240 () | 26834..27163 | + | 330 | WP_000366959.1 | HI1450 family dsDNA-mimic protein | - |
| CXW56_RS00245 () | 27216..28220 | - | 1005 | WP_000994905.1 | murein tripeptide/oligopeptide ABC transporter ATP-binding protein OppF | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|