MGE detailed information
MGE type: Prophage MGE length: 56503 bp
Accession: NZ_CP025916 Location: 130449..186951 Organism: Escherichia coli strain 120899 Replicon: chromosome
Accession: NZ_CP025916 Location: 130449..186951 Organism: Escherichia coli strain 120899 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| CXW56_RS00735 () | 125496..126167 | + | 672 | WP_001265481.1 | two-component system response regulator PhoP | - |
| CXW56_RS00740 () | 126167..127627 | + | 1461 | WP_000735412.1 | two-component system sensor histidine kinase PhoQ | - |
| CXW56_RS00745 () | 127703..128824 | + | 1122 | WP_001295435.1 | [50S ribosomal protein L16]-arginine 3-hydroxylase | - |
| CXW56_RS00750 () | 128970..130199 | - | 1230 | WP_000359463.1 | peptidase T | - |
| CXW56_RS00755 () | 130449..131585 | + | 1137 | WP_000531601.1 | Spermidine/putrescine import ATP-binding protein PotA | VF |
| CXW56_RS00760 () | 131569..132432 | + | 864 | WP_000799406.1 | spermidine/putrescine ABC transporter permease PotB | - |
| CXW56_RS00765 () | 132665..132931 | - | 267 | WP_000937496.1 | tail fiber assembly protein | - |
| CXW56_RS00770 () | 132988..133656 | + | 669 | WP_126123768.1 | class I SAM-dependent methyltransferase | - |
| CXW56_RS00780 () | 133711..134295 | - | 585 | WP_000885577.1 | tail fiber assembly protein | - |
| CXW56_RS00785 () | 134295..137708 | - | 3414 | WP_095908818.1 | prophage tail fiber N-terminal domain-containing protein | - |
| CXW56_RS00790 () | 137773..138372 | - | 600 | WP_001462065.1 | Outer membrane protein X | VF |
| CXW56_RS00795 () | 138440..141919 | - | 3480 | WP_126130058.1 | host specificity protein J | - |
| CXW56_RS00800 () | 141980..142627 | - | 648 | WP_000741576.1 | tail assembly protein | - |
| CXW56_RS00805 () | 142525..143268 | - | 744 | WP_001462126.1 | C40 family peptidase | - |
| CXW56_RS00810 () | 143273..143971 | - | 699 | WP_001152385.1 | phage minor tail protein L | - |
| CXW56_RS00815 () | 143981..144310 | - | 330 | WP_000447253.1 | phage tail protein | - |
| CXW56_RS00820 () | 144310..147366 | - | 3057 | WP_001460656.1 | phage tail tape measure protein | - |
| CXW56_RS00825 () | 147338..147667 | - | 330 | WP_001161009.1 | phage tail assembly protein T | - |
| CXW56_RS00830 () | 147676..148062 | - | 387 | WP_001298500.1 | phage minor tail protein G | - |
| CXW56_RS00835 () | 148123..148866 | - | 744 | WP_000211121.1 | phage tail protein | - |
| CXW56_RS00840 () | 148877..149278 | - | 402 | WP_001464346.1 | phage minor tail U family protein | - |
| CXW56_RS00845 () | 149275..149865 | - | 591 | WP_001398416.1 | phage tail protein | - |
| CXW56_RS00850 () | 149877..150152 | - | 276 | WP_001283153.1 | DNA breaking-rejoining protein | - |
| CXW56_RS00855 () | 150145..150468 | - | 324 | WP_001097045.1 | DUF2190 family protein | - |
| CXW56_RS00860 () | 150555..152582 | - | 2028 | WP_024169733.1 | ATP-dependent Clp protease proteolytic subunit | VF |
| CXW56_RS00865 () | 152560..154035 | - | 1476 | WP_001460789.1 | phage portal protein | - |
| CXW56_RS00870 () | 154035..154247 | - | 213 | WP_001072975.1 | hypothetical protein | - |
| CXW56_RS00875 () | 154244..155544 | - | 1301 | Protein_164 | phage terminase large subunit family protein | - |
| CXW56_RS00880 () | 155581..156258 | + | 678 | WP_001339397.1 | IS66 family transposase ISCro1 | Transposase |
| CXW56_RS00885 () | 156258..156605 | + | 348 | WP_000624622.1 | IS66 family transposase ISCro1 | Transposase |
| CXW56_RS00890 () | 156625..158196 | + | 1572 | WP_001743889.1 | IS66 family transposase ISCro1 | Transposase |
| CXW56_RS00895 () | 158250..159050 | - | 801 | Protein_168 | phage terminase large subunit family protein | - |
| CXW56_RS00900 () | 159059..159598 | - | 540 | WP_000421824.1 | DUF1441 family protein | - |
| CXW56_RS00910 () | 160179..160571 | - | 393 | WP_000415817.1 | hypothetical protein | - |
| CXW56_RS27390 () | 160746..160901 | - | 156 | WP_001138287.1 | hypothetical protein | - |
| CXW56_RS00915 () | 160930..161043 | - | 114 | WP_001297666.1 | hypothetical protein | - |
| CXW56_RS00920 () | 161176..161553 | - | 378 | WP_001117825.1 | M15 family metallopeptidase | - |
| CXW56_RS00925 () | 161556..161831 | - | 276 | WP_000950576.1 | phage holin family protein | - |
| CXW56_RS00930 () | 161821..162213 | - | 393 | WP_001297664.1 | holin | - |
| CXW56_RS00950 () | 162705..163754 | - | 1050 | WP_000611206.1 | site-specific DNA-methyltransferase | - |
| CXW56_RS00955 () | 163905..164102 | - | 198 | WP_000917767.1 | hypothetical protein | - |
| CXW56_RS00960 () | 164415..164957 | - | 543 | WP_001398904.1 | DUF1133 family protein | - |
| CXW56_RS00965 () | 164966..165331 | - | 366 | WP_001297842.1 | RusA family crossover junction endodeoxyribonuclease | - |
| CXW56_RS00970 () | 165332..166387 | - | 1056 | WP_001502278.1 | DUF968 domain-containing protein | - |
| CXW56_RS00975 () | 166389..166667 | - | 279 | WP_023607105.1 | hypothetical protein | - |
| CXW56_RS00980 () | 166734..166994 | - | 261 | WP_000701918.1 | hypothetical protein | - |
| CXW56_RS00985 () | 167195..167680 | - | 486 | WP_000818165.1 | type II toxin-antitoxin system death-on-curing family toxin | - |
| CXW56_RS00990 () | 167699..167878 | - | 180 | WP_001277775.1 | hypothetical protein | - |
| CXW56_RS00995 () | 168094..168249 | - | 156 | WP_000813254.1 | type I toxin-antitoxin system toxin HokD | Toxin Detail |
| - () | 168261..168319 | + | 59 | - | - | Antitoxin Detail |
| CXW56_RS01000 () | 168541..168963 | - | 423 | WP_000160146.1 | hypothetical protein | - |
| CXW56_RS01005 () | 169067..169479 | - | 413 | Protein_187 | DUF4406 domain-containing protein | - |
| CXW56_RS01010 () | 169482..169763 | - | 282 | WP_001509842.1 | hypothetical protein | - |
| CXW56_RS01015 () | 169796..170557 | - | 762 | WP_126130059.1 | DUF1627 domain-containing protein | - |
| CXW56_RS01020 () | 170579..171325 | - | 747 | WP_000788772.1 | ATP-binding protein | - |
| CXW56_RS01025 () | 171331..172296 | - | 966 | WP_000054517.1 | hypothetical protein | - |
| CXW56_RS01030 () | 172277..172798 | - | 522 | WP_000705382.1 | hypothetical protein | - |
| CXW56_RS01035 () | 172782..173009 | - | 228 | WP_000476985.1 | transcriptional regulator | - |
| CXW56_RS01040 () | 173087..173494 | + | 408 | WP_001003379.1 | helix-turn-helix domain-containing protein | - |
| CXW56_RS01045 () | 173684..173839 | + | 156 | WP_000379575.1 | DUF1391 family protein | - |
| CXW56_RS01050 () | 173999..174217 | + | 219 | WP_001171921.1 | hypothetical protein | - |
| CXW56_RS01055 () | 174240..174647 | + | 408 | WP_000394517.1 | hypothetical protein | - |
| CXW56_RS01060 () | 174625..174858 | - | 234 | WP_000920491.1 | hypothetical protein | - |
| CXW56_RS01070 () | 175425..175613 | + | 189 | WP_000449198.1 | hypothetical protein | - |
| CXW56_RS01075 () | 175610..175813 | + | 204 | WP_001090252.1 | DUF1482 family protein | - |
| CXW56_RS01080 () | 175893..178364 | + | 2472 | WP_001398899.1 | exonuclease | - |
| CXW56_RS01085 () | 178426..178695 | + | 270 | WP_000003742.1 | excisionase | - |
| CXW56_RS01090 () | 178664..179782 | + | 1119 | WP_001403676.1 | hypothetical protein ; Integrase | Integrase |
| CXW56_RS01095 () | 179949..180743 | + | 795 | WP_000580316.1 | spermidine/putrescine ABC transporter permease PotC | - |
| CXW56_RS01100 () | 180740..181786 | + | 1047 | WP_000759318.1 | spermidine/putrescine ABC transporter substrate-binding protein PotD | - |
| CXW56_RS01105 () | 181844..182305 | + | 462 | WP_001341497.1 | DUF3592 domain-containing protein | - |
| CXW56_RS01110 () | 182302..183090 | + | 789 | WP_000713472.1 | TPM domain-containing protein | - |
| CXW56_RS01115 () | 183229..184050 | - | 822 | WP_000952736.1 | NAD-dependent protein deacylase | - |
| CXW56_RS01120 () | 184066..184977 | - | 912 | WP_000291270.1 | N-acetylglucosamine kinase | - |
| CXW56_RS01125 () | 185006..186250 | - | 1245 | WP_001251348.1 | lipoprotein-releasing ABC transporter permease subunit LolE | - |
| CXW56_RS01130 () | 186250..186951 | - | 702 | WP_001033694.1 | Lipoprotein-releasing system ATP-binding protein LolD | VF |
| CXW56_RS01135 () | 186944..188143 | - | 1200 | WP_000284709.1 | lipoprotein-releasing ABC transporter permease subunit LolC | - |
| CXW56_RS01140 () | 188405..189478 | + | 1074 | WP_000810250.1 | acyltransferase family protein | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|