MGE detailed information
MGE type: Prophage MGE length: 56348 bp
Accession: NZ_CP025910 Location: 4082949..4139296 Organism: Escherichia coli strain 204446 Replicon: chromosome
Accession: NZ_CP025910 Location: 4082949..4139296 Organism: Escherichia coli strain 204446 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| CXW77_RS20190 () | 4078559..4079200 | + | 642 | WP_001297479.1 | high frequency lysogenization protein HflD | - |
| CXW77_RS20195 () | 4079204..4080574 | + | 1371 | WP_000423729.1 | adenylosuccinate lyase | - |
| CXW77_RS20200 () | 4080742..4081413 | + | 672 | WP_001265481.1 | two-component system response regulator PhoP | - |
| CXW77_RS20205 () | 4081413..4082873 | + | 1461 | WP_000735412.1 | two-component system sensor histidine kinase PhoQ | - |
| CXW77_RS20210 () | 4082949..4084070 | + | 1122 | WP_001295435.1 | [50S ribosomal protein L16]-arginine 3-hydroxylase | - |
| CXW77_RS20215 () | 4084216..4085445 | - | 1230 | WP_000359463.1 | peptidase T | - |
| CXW77_RS20220 () | 4085695..4086831 | + | 1137 | WP_000531601.1 | Vitamin B12 import ATP-binding protein BtuD | VF |
| CXW77_RS20225 () | 4086815..4087678 | + | 864 | WP_000799406.1 | spermidine/putrescine ABC transporter permease PotB | - |
| CXW77_RS20230 () | 4087911..4088177 | - | 267 | WP_000937496.1 | tail fiber assembly protein | - |
| CXW77_RS20235 () | 4088234..4088902 | + | 669 | WP_126123768.1 | class I SAM-dependent methyltransferase | - |
| CXW77_RS20245 () | 4088957..4089541 | - | 585 | WP_000885577.1 | tail fiber assembly protein | - |
| CXW77_RS20250 () | 4089541..4092954 | - | 3414 | WP_095908818.1 | prophage tail fiber N-terminal domain-containing protein | - |
| CXW77_RS20255 () | 4093019..4093618 | - | 600 | WP_001462065.1 | hypothetical protein | VF |
| CXW77_RS20260 () | 4093686..4097165 | - | 3480 | WP_126130058.1 | host specificity protein J | - |
| CXW77_RS20265 () | 4097226..4097873 | - | 648 | WP_000741576.1 | tail assembly protein | - |
| CXW77_RS20270 () | 4097771..4098514 | - | 744 | WP_001462126.1 | C40 family peptidase | - |
| CXW77_RS20275 () | 4098519..4099217 | - | 699 | WP_001152385.1 | phage minor tail protein L | - |
| CXW77_RS20280 () | 4099227..4099556 | - | 330 | WP_000447253.1 | phage tail protein | - |
| CXW77_RS20285 () | 4099556..4102612 | - | 3057 | WP_001460656.1 | phage tail tape measure protein | - |
| CXW77_RS20290 () | 4102584..4102913 | - | 330 | WP_001161009.1 | phage tail assembly protein T | - |
| CXW77_RS20295 () | 4102922..4103308 | - | 387 | WP_001298500.1 | phage minor tail protein G | - |
| CXW77_RS20300 () | 4103369..4104112 | - | 744 | WP_000211121.1 | phage tail protein | - |
| CXW77_RS20305 () | 4104123..4104524 | - | 402 | WP_001464346.1 | phage minor tail U family protein | - |
| CXW77_RS20310 () | 4104521..4105111 | - | 591 | WP_001398416.1 | phage tail protein | - |
| CXW77_RS20315 () | 4105123..4105398 | - | 276 | WP_001283153.1 | DNA breaking-rejoining protein | - |
| CXW77_RS20320 () | 4105391..4105714 | - | 324 | WP_001097045.1 | DUF2190 family protein | - |
| CXW77_RS20325 () | 4105801..4107828 | - | 2028 | WP_024169733.1 | ATP-dependent Clp protease proteolytic subunit | VF |
| CXW77_RS20330 () | 4107806..4109281 | - | 1476 | WP_001460789.1 | phage portal protein | - |
| CXW77_RS20335 () | 4109281..4109493 | - | 213 | WP_001072975.1 | hypothetical protein | - |
| CXW77_RS20340 () | 4109490..4110790 | - | 1301 | Protein_3905 | phage terminase large subunit family protein | - |
| CXW77_RS20345 () | 4110827..4111504 | + | 678 | WP_001339397.1 | IS66 family transposase ISCro1 | Transposase |
| CXW77_RS20350 () | 4111504..4111851 | + | 348 | WP_000624622.1 | IS66 family transposase ISCro1 | Transposase |
| CXW77_RS20355 () | 4111871..4113442 | + | 1572 | WP_001743889.1 | IS66 family transposase ISCro1 | Transposase |
| CXW77_RS20360 () | 4113496..4114296 | - | 801 | Protein_3909 | phage terminase large subunit family protein | - |
| CXW77_RS20365 () | 4114305..4114844 | - | 540 | WP_000421824.1 | DUF1441 family protein | - |
| CXW77_RS20375 () | 4115425..4115817 | - | 393 | WP_000415817.1 | hypothetical protein | - |
| CXW77_RS27130 () | 4115992..4116147 | - | 156 | WP_001138287.1 | hypothetical protein | - |
| CXW77_RS20380 () | 4116176..4116289 | - | 114 | WP_001297666.1 | hypothetical protein | - |
| CXW77_RS20385 () | 4116422..4116799 | - | 378 | WP_001117825.1 | M15 family metallopeptidase | - |
| CXW77_RS20390 () | 4116802..4117077 | - | 276 | WP_000950576.1 | phage holin family protein | - |
| CXW77_RS20395 () | 4117067..4117459 | - | 393 | WP_001297664.1 | holin | - |
| CXW77_RS20415 () | 4117951..4119000 | - | 1050 | WP_000611206.1 | site-specific DNA-methyltransferase | - |
| CXW77_RS20420 () | 4119151..4119348 | - | 198 | WP_000917767.1 | hypothetical protein | - |
| CXW77_RS20425 () | 4119661..4120203 | - | 543 | WP_001398904.1 | DUF1133 family protein | - |
| CXW77_RS20430 () | 4120212..4120577 | - | 366 | WP_001297842.1 | RusA family crossover junction endodeoxyribonuclease | - |
| CXW77_RS20435 () | 4120578..4121633 | - | 1056 | WP_001502278.1 | DUF968 domain-containing protein | - |
| CXW77_RS20440 () | 4121635..4121913 | - | 279 | WP_023607105.1 | hypothetical protein | - |
| CXW77_RS20445 () | 4121980..4122240 | - | 261 | WP_000701918.1 | hypothetical protein | - |
| CXW77_RS20450 () | 4122441..4122926 | - | 486 | WP_000818165.1 | type II toxin-antitoxin system death-on-curing family toxin | - |
| CXW77_RS20455 () | 4122945..4123124 | - | 180 | WP_001277775.1 | hypothetical protein | - |
| CXW77_RS20460 () | 4123340..4123495 | - | 156 | WP_000813254.1 | type I toxin-antitoxin system toxin HokD | Toxin Detail |
| - () | 4123507..4123565 | + | 59 | - | - | Antitoxin Detail |
| CXW77_RS20465 () | 4123787..4124209 | - | 423 | WP_000160146.1 | hypothetical protein | - |
| CXW77_RS20470 () | 4124313..4124725 | - | 413 | Protein_3928 | DUF4406 domain-containing protein | - |
| CXW77_RS20475 () | 4124728..4125009 | - | 282 | WP_001509842.1 | hypothetical protein | - |
| CXW77_RS20480 () | 4125042..4125803 | - | 762 | WP_126130059.1 | DUF1627 domain-containing protein | - |
| CXW77_RS20485 () | 4125825..4126571 | - | 747 | WP_000788772.1 | ATP-binding protein | - |
| CXW77_RS20490 () | 4126577..4127542 | - | 966 | WP_000054517.1 | hypothetical protein | - |
| CXW77_RS20495 () | 4127523..4128044 | - | 522 | WP_000705382.1 | hypothetical protein | - |
| CXW77_RS20500 () | 4128028..4128255 | - | 228 | WP_000476985.1 | transcriptional regulator | - |
| CXW77_RS20505 () | 4128333..4128740 | + | 408 | WP_001003379.1 | helix-turn-helix domain-containing protein | - |
| CXW77_RS20510 () | 4128930..4129085 | + | 156 | WP_000379575.1 | DUF1391 family protein | - |
| CXW77_RS20515 () | 4129245..4129463 | + | 219 | WP_001171921.1 | hypothetical protein | - |
| CXW77_RS20520 () | 4129486..4129893 | + | 408 | WP_000394517.1 | hypothetical protein | - |
| CXW77_RS20525 () | 4129871..4130104 | - | 234 | WP_000920491.1 | hypothetical protein | - |
| CXW77_RS20535 () | 4130671..4130859 | + | 189 | WP_000449198.1 | hypothetical protein | - |
| CXW77_RS20540 () | 4130856..4131059 | + | 204 | WP_001090252.1 | DUF1482 family protein | - |
| CXW77_RS20545 () | 4131139..4133610 | + | 2472 | WP_001398899.1 | exonuclease | - |
| CXW77_RS20550 () | 4133672..4133941 | + | 270 | WP_000003742.1 | excisionase | - |
| CXW77_RS20555 () | 4133910..4135028 | + | 1119 | WP_001403676.1 | hypothetical protein ; Integrase | Integrase |
| CXW77_RS20560 () | 4135195..4135989 | + | 795 | WP_000580316.1 | spermidine/putrescine ABC transporter permease PotC | - |
| CXW77_RS20565 () | 4135986..4137032 | + | 1047 | WP_000759318.1 | spermidine/putrescine ABC transporter substrate-binding protein PotD | - |
| CXW77_RS20570 () | 4137090..4137551 | + | 462 | WP_001341497.1 | DUF3592 domain-containing protein | - |
| CXW77_RS20575 () | 4137548..4138336 | + | 789 | WP_000713472.1 | TPM domain-containing protein | - |
| CXW77_RS20580 () | 4138475..4139296 | - | 822 | WP_000952736.1 | NAD-dependent protein deacylase | - |
| CXW77_RS20585 () | 4139312..4140223 | - | 912 | WP_000291270.1 | N-acetylglucosamine kinase | - |
| CXW77_RS20590 () | 4140252..4141496 | - | 1245 | WP_001251348.1 | lipoprotein-releasing ABC transporter permease subunit LolE | - |
| CXW77_RS20595 () | 4141496..4142197 | - | 702 | WP_001033694.1 | lipoprotein-releasing ABC transporter ATP-binding protein LolD | - |
| CXW77_RS20600 () | 4142190..4143389 | - | 1200 | WP_000284709.1 | lipoprotein-releasing ABC transporter permease subunit LolC | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|