MGE detailed information
MGE type: Prophage MGE length: 62399 bp
Accession: NZ_CP025903 Location: 2185564..2247962 Organism: Escherichia coli strain 300709 Replicon: chromosome
Accession: NZ_CP025903 Location: 2185564..2247962 Organism: Escherichia coli strain 300709 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| CXV43_RS10955 () | 2181004..2182377 | + | 1374 | WP_001127216.1 | MFS transporter | - |
| CXV43_RS10960 () | 2182423..2183304 | - | 882 | WP_000984520.1 | protease HtpX | - |
| CXV43_RS10965 () | 2183496..2185544 | - | 2049 | WP_001055791.1 | carboxy terminal-processing peptidase | - |
| CXV43_RS10970 () | 2185564..2186262 | - | 699 | WP_000431381.1 | RNA chaperone ProQ | - |
| CXV43_RS10975 () | 2186359..2186856 | - | 498 | WP_001043877.1 | L-methionine (R)-S-oxide reductase | - |
| CXV43_RS10980 () | 2186986..2188269 | + | 1284 | WP_001207282.1 | membrane integrity lipid transport subunit YebS | - |
| CXV43_RS10985 () | 2188238..2190871 | + | 2634 | WP_001326728.1 | hypothetical protein | VF |
| CXV43_RS10990 () | 2190951..2192390 | + | 1440 | WP_126125416.1 | 16S rRNA (cytosine(1407)-C(5))-methyltransferase RsmF | - |
| CXV43_RS10995 () | 2192508..2192744 | + | 237 | WP_001295499.1 | DUF1480 family protein | - |
| CXV43_RS11000 () | 2192849..2193040 | + | 192 | WP_000457842.1 | YebW family protein | - |
| CXV43_RS11005 () | 2193041..2193697 | - | 657 | WP_001413399.1 | protein-serine/threonine phosphatase | - |
| CXV43_RS11010 () | 2194162..2194716 | - | 555 | WP_001738125.1 | Tn3 family transposase TnpR_ISPa38 | Transposase |
| CXV43_RS11015 () | 2194746..2195135 | + | 390 | WP_024168952.1 | hypothetical protein | - |
| CXV43_RS25335 () | 2195157..2195258 | + | 102 | Protein_2149 | tail fiber assembly protein | - |
| CXV43_RS25340 () | 2195235..2195378 | + | 144 | Protein_2150 | integrase | - |
| CXV43_RS11025 () | 2195452..2195670 | - | 219 | WP_106410078.1 | hypothetical protein | - |
| CXV43_RS11030 () | 2195839..2196858 | + | 1020 | WP_126125417.1 | acyltransferase | - |
| CXV43_RS11035 () | 2196870..2197049 | - | 180 | WP_001736677.1 | hypothetical protein | - |
| CXV43_RS11040 () | 2197049..2198197 | - | 1149 | WP_001737234.1 | hypothetical protein | - |
| CXV43_RS11045 () | 2198349..2198708 | - | 360 | Protein_2155 | hypothetical protein | - |
| CXV43_RS11050 () | 2198705..2199112 | - | 408 | WP_000042170.1 | DUF4054 domain-containing protein | - |
| CXV43_RS11055 () | 2199078..2199446 | - | 369 | WP_001040697.1 | hypothetical protein | - |
| CXV43_RS11060 () | 2199487..2200428 | - | 942 | WP_000627490.1 | DUF2184 domain-containing protein | - |
| CXV43_RS11065 () | 2200440..2200946 | - | 507 | WP_001737236.1 | phage protein | - |
| CXV43_RS11070 () | 2200950..2202170 | - | 1221 | WP_001737237.1 | DUF2213 domain-containing protein | - |
| CXV43_RS11075 () | 2202185..2202919 | - | 735 | WP_000184969.1 | hypothetical protein | - |
| CXV43_RS11080 () | 2202810..2204276 | - | 1467 | WP_001737238.1 | DUF1073 domain-containing protein | - |
| CXV43_RS11085 () | 2204276..2205898 | - | 1623 | WP_001738131.1 | hypothetical protein | - |
| CXV43_RS11090 () | 2205901..2206452 | - | 552 | WP_001519801.1 | terminase small subunit | - |
| CXV43_RS11095 () | 2206477..2206749 | + | 273 | WP_001281633.1 | hypothetical protein | - |
| CXV43_RS11100 () | 2207066..2207473 | - | 408 | Protein_2166 | hypothetical protein | - |
| CXV43_RS11105 () | 2207532..2207993 | - | 462 | WP_001519804.1 | lysis protein | - |
| CXV43_RS11110 () | 2207990..2208466 | - | 477 | WP_001737241.1 | glycoside hydrolase family protein | - |
| CXV43_RS11115 () | 2208470..2208811 | - | 342 | WP_000781789.1 | phage holin, lambda family | - |
| CXV43_RS11120 () | 2209029..2209307 | + | 279 | WP_001519807.1 | hypothetical protein | - |
| CXV43_RS11125 () | 2209293..2209523 | - | 231 | WP_000675202.1 | hypothetical protein | - |
| CXV43_RS11135 () | 2209661..2210218 | - | 558 | WP_001737244.1 | ORF6N domain-containing protein | - |
| CXV43_RS11140 () | 2210493..2211047 | - | 555 | WP_001737245.1 | DUF1133 family protein | - |
| CXV43_RS11145 () | 2211044..2211334 | - | 291 | WP_001737246.1 | DUF1364 domain-containing protein | - |
| CXV43_RS11150 () | 2211334..2211933 | - | 600 | WP_001737247.1 | DUF1367 family protein | - |
| CXV43_RS11160 () | 2212493..2212648 | - | 156 | WP_000813255.1 | type I toxin-antitoxin system toxin HokD | - |
| CXV43_RS11175 () | 2213315..2213725 | - | 411 | WP_001737251.1 | hypothetical protein | - |
| CXV43_RS11180 () | 2213736..2213999 | - | 264 | WP_001737252.1 | hypothetical protein | - |
| CXV43_RS11185 () | 2214057..2214347 | - | 291 | WP_001737253.1 | DUF4406 domain-containing protein | - |
| CXV43_RS11190 () | 2214344..2214769 | - | 426 | WP_001737254.1 | DUF977 family protein | - |
| CXV43_RS11195 () | 2214785..2215546 | - | 762 | WP_000450684.1 | DUF1627 domain-containing protein | - |
| CXV43_RS11200 () | 2215569..2216315 | - | 747 | WP_000788991.1 | ATP-binding protein | - |
| CXV43_RS11205 () | 2216322..2217110 | - | 789 | WP_001737256.1 | hypothetical protein | - |
| CXV43_RS11210 () | 2217188..2217610 | - | 423 | WP_001737257.1 | hypothetical protein | - |
| CXV43_RS11215 () | 2217607..2217849 | - | 243 | WP_032243894.1 | helix-turn-helix domain-containing protein | - |
| CXV43_RS11220 () | 2217946..2218365 | + | 420 | WP_000410105.1 | helix-turn-helix domain-containing protein | - |
| CXV43_RS11225 () | 2218666..2218884 | + | 219 | WP_000232637.1 | hypothetical protein | - |
| CXV43_RS11230 () | 2218850..2219044 | - | 195 | WP_001419881.1 | hypothetical protein | - |
| CXV43_RS11235 () | 2219440..2219661 | + | 222 | WP_000560226.1 | killing protein KilR | - |
| CXV43_RS11240 () | 2219655..2219831 | + | 177 | WP_000245528.1 | hypothetical protein | - |
| CXV43_RS11245 () | 2219906..2220181 | + | 276 | WP_001737258.1 | bacteriophage protein | - |
| CXV43_RS11250 () | 2220281..2222914 | + | 2634 | WP_001738138.1 | exodeoxyribonuclease VIII | - |
| CXV43_RS11255 () | 2222907..2223716 | + | 810 | WP_000166317.1 | recombination protein RecT | - |
| CXV43_RS11260 () | 2223773..2223967 | + | 195 | WP_042853000.1 | type I toxin-antitoxin system endodeoxyribonuclease toxin RalR | - |
| CXV43_RS11265 () | 2223960..2224148 | + | 189 | WP_001356607.1 | DUF1187 family protein | - |
| - () | 2223966..2224144 | - | 179 | NuclAT_0 | - | - |
| - () | 2223966..2224144 | - | 179 | NuclAT_0 | - | - |
| - () | 2223966..2224144 | - | 179 | NuclAT_0 | - | - |
| - () | 2223966..2224144 | - | 179 | NuclAT_0 | - | - |
| CXV43_RS11270 () | 2224255..2224536 | + | 282 | WP_001311878.1 | excisionase | - |
| CXV43_RS11275 () | 2224502..2225578 | + | 1077 | WP_001189091.1 | hypothetical protein ; Integrase | Integrase |
| - () | 2225709..2225943 | + | 235 | - | - | Antitoxin Detail |
| - () | 2225710..2225813 | - | 104 | - | - | Toxin Detail |
| CXV43_RS11280 () | 2225971..2226312 | - | 342 | WP_000976476.1 | YebY family protein | - |
| CXV43_RS11285 () | 2226325..2227197 | - | 873 | WP_000879289.1 | copper homeostasis membrane protein CopD | - |
| CXV43_RS11290 () | 2227201..2227575 | - | 375 | WP_000168747.1 | CopC domain-containing protein YobA | - |
| CXV43_RS11295 () | 2227714..2227944 | + | 231 | WP_000916763.1 | DNA polymerase III subunit theta | - |
| CXV43_RS11300 () | 2228046..2228702 | + | 657 | WP_000011658.1 | carbon-nitrogen hydrolase family protein | - |
| CXV43_RS11305 () | 2228726..2229388 | + | 663 | WP_000944256.1 | exodeoxyribonuclease X | - |
| CXV43_RS11310 () | 2229385..2231445 | - | 2061 | WP_000936927.1 | oligopeptidase B | - |
| CXV43_RS11315 () | 2231654..2232313 | - | 660 | WP_000024757.1 | tellurite resistance TerB family protein | - |
| CXV43_RS11320 () | 2232640..2232996 | - | 357 | WP_001295500.1 | protein YebF | - |
| CXV43_RS11325 () | 2233063..2233353 | - | 291 | WP_000257738.1 | DNA damage-inducible protein YebG | - |
| CXV43_RS11330 () | 2233487..2234665 | + | 1179 | WP_000173484.1 | formate-dependent phosphoribosylglycinamide formyltransferase | - |
| CXV43_RS11335 () | 2234721..2235362 | - | 642 | WP_001413402.1 | bifunctional 4-hydroxy-2-oxoglutarate aldolase/2-dehydro-3-deoxy-phosphogluconate aldolase | - |
| CXV43_RS11340 () | 2235399..2237210 | - | 1812 | WP_001069467.1 | phosphogluconate dehydratase | - |
| CXV43_RS11345 () | 2237445..2238920 | - | 1476 | WP_000301727.1 | glucose-6-phosphate dehydrogenase | - |
| CXV43_RS11350 () | 2239258..2240127 | + | 870 | WP_001056706.1 | DNA-binding transcriptional regulator HexR | - |
| CXV43_RS11355 () | 2240255..2241697 | + | 1443 | WP_000091148.1 | pyruvate kinase | - |
| CXV43_RS11360 () | 2241828..2242799 | - | 972 | WP_000448381.1 | Lipid A biosynthesis myristoyltransferase | VF |
| CXV43_RS11365 () | 2242919..2244241 | - | 1323 | WP_001184045.1 | murein DD-endopeptidase MepM | - |
| CXV43_RS11370 () | 2244257..2245189 | - | 933 | WP_001300644.1 | zinc ABC transporter substrate-binding protein ZnuA | - |
| CXV43_RS11375 () | 2245268..2246023 | + | 756 | WP_000202996.1 | Zinc import ATP-binding protein ZnuC | VF |
| CXV43_RS11380 () | 2246020..2246805 | + | 786 | WP_001413405.1 | High-affinity zinc uptake system membrane protein ZnuB | VF |
| CXV43_RS11385 () | 2246952..2247962 | - | 1011 | WP_000568519.1 | Holliday junction branch migration DNA helicase RuvB | - |
| CXV43_RS11390 () | 2247971..2248582 | - | 612 | WP_000580323.1 | Holliday junction branch migration protein RuvA | - |
| CXV43_RS11395 () | 2248721..2248786 | - | 66 | WP_010723105.1 | stress response small protein YobI | - |
| CXV43_RS11400 () | 2248857..2249459 | + | 603 | WP_001024932.1 | YebB family permuted papain-like enzyme | - |
| CXV43_RS11405 () | 2249461..2249982 | - | 522 | WP_001295503.1 | crossover junction endodeoxyribonuclease RuvC | - |
| CXV43_RS11410 () | 2250017..2250757 | - | 741 | WP_000907248.1 | YebC/PmpR family DNA-binding transcriptional regulator | - |
| CXV43_RS11415 () | 2250786..2251238 | - | 453 | WP_001300367.1 | dihydroneopterin triphosphate diphosphatase | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|