MGE detailed information
MGE type: Prophage MGE length: 39569 bp
Accession: NZ_CP025903 Location: 1835274..1874842 Organism: Escherichia coli strain 300709 Replicon: chromosome
Accession: NZ_CP025903 Location: 1835274..1874842 Organism: Escherichia coli strain 300709 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| CXV43_RS08995 () | 1830289..1830723 | + | 435 | WP_000843414.1 | multiple antibiotic resistance transcriptional regulator MarR | - |
| CXV43_RS09000 () | 1830743..1831126 | + | 384 | WP_000091199.1 | MDR efflux pump AcrAB transcriptional activator MarA | - |
| CXV43_RS09005 () | 1831158..1831376 | + | 219 | WP_000803657.1 | multiple antibiotic resistance protein MarB | - |
| CXV43_RS09010 () | 1831407..1832306 | - | 900 | WP_000087187.1 | O-acetylserine/cysteine exporter | - |
| CXV43_RS09015 () | 1832501..1833688 | + | 1188 | WP_001054183.1 | efflux MFS transporter YdeE | - |
| CXV43_RS09020 () | 1833815..1833910 | + | 96 | WP_000901367.1 | protein MgtS | - |
| CXV43_RS25450 () | 1833910..1834014 | + | 105 | WP_211180496.1 | protein MgtT | - |
| CXV43_RS09025 () | 1834129..1835019 | - | 891 | WP_000592814.1 | diguanylate cyclase DgcZ | - |
| CXV43_RS09030 () | 1835274..1835666 | - | 393 | WP_000671737.1 | YdeI family stress tolerance OB fold protein | - |
| CXV43_RS09035 () | 1835942..1836460 | + | 519 | WP_001024746.1 | 2-oxo-tetronate isomerase | - |
| CXV43_RS09040 () | 1836504..1838549 | - | 2046 | WP_000210373.1 | peptidyl-dipeptidase Dcp | - |
| CXV43_RS09045 () | 1838686..1839432 | + | 747 | WP_000636571.1 | NADP-dependent 3-hydroxy acid dehydrogenase YdfG | VF |
| CXV43_RS09050 () | 1839521..1840207 | + | 687 | WP_000215549.1 | DNA-binding transcriptional regulator YdfH | - |
| CXV43_RS09055 () | 1840384..1840587 | + | 204 | WP_000214712.1 | putative selenium delivery protein YdfZ | - |
| CXV43_RS09060 () | 1840622..1842082 | - | 1461 | WP_000527809.1 | mannitol dehydrogenase family protein | - |
| CXV43_RS09065 () | 1842171..1843454 | - | 1284 | Protein_1764 | MHS family MFS transporter YdfJ | - |
| CXV43_RS09070 () | 1844058..1844171 | + | 114 | WP_120795384.1 | hypothetical protein | - |
| CXV43_RS09075 () | 1844240..1844473 | + | 234 | WP_000836768.1 | cold shock protein YdfK | - |
| CXV43_RS09080 () | 1844790..1845380 | + | 591 | WP_000086522.1 | Tn3 family transposase TnpR_ISSba14 | Transposase |
| CXV43_RS09085 () | 1845478..1846053 | - | 576 | WP_001413248.1 | tail fiber assembly protein | - |
| CXV43_RS09090 () | 1846053..1846361 | - | 309 | WP_071524888.1 | phage tail protein | - |
| CXV43_RS09095 () | 1846352..1848289 | - | 1938 | Protein_1770 | host specificity protein J | - |
| CXV43_RS09100 () | 1848286..1848429 | - | 144 | Protein_1771 | phage tail tape measure protein | - |
| CXV43_RS09105 () | 1848422..1848856 | - | 435 | WP_000459464.1 | phage tail assembly protein T | - |
| CXV43_RS09110 () | 1848838..1849473 | - | 636 | WP_001413251.1 | phage minor tail protein G | - |
| CXV43_RS09115 () | 1849470..1850186 | - | 717 | WP_001413252.1 | phage portal protein | - |
| CXV43_RS09120 () | 1850183..1850389 | - | 207 | WP_000198153.1 | gpW family protein | - |
| CXV43_RS09125 () | 1850386..1850808 | - | 423 | WP_001737163.1 | phage terminase large subunit family protein | - |
| CXV43_RS09130 () | 1850718..1851350 | - | 633 | WP_077770029.1 | terminase small subunit | - |
| CXV43_RS09135 () | 1851457..1852134 | + | 678 | WP_126125406.1 | IS66 family transposase ISCro1 | Transposase |
| CXV43_RS09140 () | 1852134..1852481 | + | 348 | WP_000624622.1 | IS66 family transposase ISCro1 | Transposase |
| CXV43_RS09145 () | 1852501..1854072 | + | 1572 | WP_001743889.1 | IS66 family transposase ISCro1 | Transposase |
| CXV43_RS09150 () | 1854446..1854679 | + | 234 | WP_001368374.1 | YlcI/YnfO family protein | - |
| CXV43_RS09155 () | 1854737..1854889 | + | 153 | Protein_1782 | DUF1398 family protein | - |
| CXV43_RS09160 () | 1854942..1856170 | + | 1229 | WP_164544914.1 | IS3 family transposase IS2 | Transposase |
| CXV43_RS09165 () | 1856184..1856483 | + | 300 | Protein_1784 | DUF1398 family protein | - |
| CXV43_RS09170 () | 1856635..1856808 | - | 174 | WP_001019606.1 | addiction module toxin, GnsA/GnsB family | - |
| CXV43_RS09175 () | 1856980..1857135 | - | 156 | WP_001309517.1 | hypothetical protein | - |
| CXV43_RS09180 () | 1857215..1857280 | - | 66 | WP_120795388.1 | hypothetical protein | - |
| CXV43_RS09185 () | 1857283..1857471 | - | 189 | WP_071524604.1 | cold-shock protein | - |
| CXV43_RS09190 () | 1857482..1857694 | - | 213 | WP_000066495.1 | cold shock protein CspI | - |
| CXV43_RS09195 () | 1858057..1858554 | - | 498 | WP_001071769.1 | DUF2514 domain-containing protein | - |
| CXV43_RS09200 () | 1858551..1859084 | - | 534 | WP_001092971.1 | lysozyme | - |
| CXV43_RS09205 () | 1859081..1859392 | - | 312 | WP_000189916.1 | YdfR family protein | - |
| CXV43_RS09210 () | 1859397..1859612 | - | 216 | WP_000839590.1 | phage lysis protein EssD | - |
| CXV43_RS25455 () | 1859832..1860002 | + | 171 | WP_211180497.1 | putative zinc-binding protein YnfU | - |
| CXV43_RS09215 () | 1860366..1860581 | - | 216 | WP_000066484.1 | cold shock-like protein CspB | - |
| CXV43_RS09220 () | 1860882..1861094 | + | 213 | WP_000087756.1 | cold shock-like protein CspF | - |
| CXV43_RS09225 () | 1861149..1861238 | + | 90 | WP_120795389.1 | hypothetical protein | - |
| CXV43_RS09230 () | 1861516..1862268 | - | 753 | WP_001047135.1 | antitermination protein | - |
| CXV43_RS09235 () | 1862282..1863331 | - | 1050 | WP_001265198.1 | DUF968 domain-containing protein | - |
| CXV43_RS09240 () | 1863333..1863611 | - | 279 | WP_012304870.1 | hypothetical protein | - |
| CXV43_RS09245 () | 1863678..1863929 | - | 252 | WP_000980994.1 | hypothetical protein | - |
| CXV43_RS09250 () | 1864146..1864301 | - | 156 | WP_000813254.1 | type I toxin-antitoxin system toxin HokD | - |
| CXV43_RS09255 () | 1864373..1864660 | - | 288 | WP_000323025.1 | type II toxin-antitoxin system mRNA interferase RelE | Toxin Detail |
| CXV43_RS09260 () | 1864660..1864899 | - | 240 | WP_000534858.1 | type II toxin-antitoxin system antitoxin RelB | Antitoxin Detail |
| CXV43_RS09265 () | 1864924..1865229 | + | 306 | WP_001326990.1 | hypothetical protein | - |
| CXV43_RS09270 () | 1865432..1865764 | + | 333 | WP_001301033.1 | protein FlxA | - |
| CXV43_RS09275 () | 1866201..1867514 | - | 1314 | WP_021558774.1 | ISNCY family transposase ISCARN112 | Transposase |
| CXV43_RS25330 () | 1869729..1870016 | - | 288 | Protein_1809 | hypothetical protein | - |
| CXV43_RS09295 () | 1870627..1870983 | - | 357 | WP_001310834.1 | class I SAM-dependent methyltransferase | - |
| CXV43_RS09300 () | 1870980..1871231 | - | 252 | Protein_1811 | DUF977 family protein | - |
| CXV43_RS09305 () | 1871221..1873203 | + | 1983 | Protein_1812 | 3'-5' exoribonuclease | - |
| CXV43_RS09310 () | 1873276..1873527 | + | 252 | WP_000005552.1 | excisionase family protein | - |
| CXV43_RS09315 () | 1873562..1874842 | + | 1281 | WP_001413284.1 | Putative defective protein IntQ ; Integrase | Integrase |
| CXV43_RS09325 () | 1875030..1876049 | - | 1020 | WP_000836066.1 | Zn-dependent oxidoreductase | - |
| CXV43_RS09330 () | 1876061..1876670 | - | 610 | Protein_1816 | hypothetical protein | - |
| CXV43_RS09335 () | 1876876..1877202 | - | 327 | WP_000598292.1 | YnfA family protein | - |
| CXV43_RS09340 () | 1877337..1877678 | + | 342 | WP_000705211.1 | DUF1283 family protein | - |
| CXV43_RS09345 () | 1877713..1878273 | + | 561 | WP_001138581.1 | spermidine N1-acetyltransferase | - |
| CXV43_RS09350 () | 1878276..1878986 | - | 711 | WP_001321287.1 | YnfC family lipoprotein | - |
| CXV43_RS09355 () | 1879094..1879399 | + | 306 | WP_001300836.1 | DUF1161 domain-containing protein | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|