MGE detailed information
MGE type: Prophage MGE length: 45688 bp
Accession: NZ_CP025881 Location: 1526236..1571923 Organism: Escherichia coli strain 503440 Replicon: chromosome
Accession: NZ_CP025881 Location: 1526236..1571923 Organism: Escherichia coli strain 503440 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| CXX05_RS07580 () | 1521676..1523049 | + | 1374 | WP_001127216.1 | MFS transporter | - |
| CXX05_RS07585 () | 1523095..1523976 | - | 882 | WP_000984517.1 | protease HtpX | - |
| CXX05_RS07590 () | 1524168..1526216 | - | 2049 | WP_001055771.1 | carboxy terminal-processing peptidase | - |
| CXX05_RS07595 () | 1526236..1526934 | - | 699 | WP_000431370.1 | RNA chaperone ProQ | - |
| CXX05_RS07600 () | 1527031..1527528 | - | 498 | WP_001043882.1 | L-methionine (R)-S-oxide reductase | - |
| CXX05_RS07605 () | 1527658..1528941 | + | 1284 | WP_001207283.1 | membrane integrity lipid transport subunit YebS | - |
| CXX05_RS07610 () | 1528910..1531543 | + | 2634 | WP_001297532.1 | hypothetical protein | VF |
| CXX05_RS07615 () | 1531623..1533062 | + | 1440 | WP_000057022.1 | 16S rRNA (cytosine(1407)-C(5))-methyltransferase RsmF | - |
| CXX05_RS07620 () | 1533180..1533416 | + | 237 | WP_001295499.1 | DUF1480 family protein | - |
| CXX05_RS07625 () | 1533521..1533712 | + | 192 | WP_000457842.1 | YebW family protein | - |
| CXX05_RS07630 () | 1533713..1534369 | - | 657 | WP_000812724.1 | protein-serine/threonine phosphatase | - |
| - () | 1534466..1534737 | + | 272 | - | - | Antitoxin Detail |
| - () | 1534504..1534607 | - | 104 | - | - | Toxin Detail |
| CXX05_RS07635 () | 1534765..1535106 | - | 342 | WP_000976492.1 | YebY family protein | - |
| CXX05_RS07640 () | 1535119..1535991 | - | 873 | WP_000879280.1 | copper homeostasis membrane protein CopD | - |
| CXX05_RS07645 () | 1535995..1536369 | - | 375 | WP_000204699.1 | CopC domain-containing protein YobA | - |
| CXX05_RS07650 () | 1536508..1536738 | + | 231 | WP_000916763.1 | DNA polymerase III subunit theta | - |
| CXX05_RS07655 () | 1536840..1537496 | + | 657 | WP_000011658.1 | carbon-nitrogen hydrolase family protein | - |
| CXX05_RS07660 () | 1537520..1538182 | + | 663 | WP_000944256.1 | exodeoxyribonuclease X | - |
| CXX05_RS07665 () | 1538179..1540239 | - | 2061 | WP_000936951.1 | oligopeptidase B | - |
| CXX05_RS07670 () | 1540448..1541107 | - | 660 | WP_000024745.1 | tellurite resistance TerB family protein | - |
| CXX05_RS07675 () | 1541434..1541790 | - | 357 | WP_001295500.1 | protein YebF | - |
| CXX05_RS07680 () | 1541857..1542147 | - | 291 | WP_000257738.1 | DNA damage-inducible protein YebG | - |
| CXX05_RS07685 () | 1542281..1543459 | + | 1179 | WP_000173474.1 | formate-dependent phosphoribosylglycinamide formyltransferase | - |
| CXX05_RS07690 () | 1543515..1544156 | - | 642 | WP_000800512.1 | bifunctional 4-hydroxy-2-oxoglutarate aldolase/2-dehydro-3-deoxy-phosphogluconate aldolase | - |
| CXX05_RS07695 () | 1544193..1546004 | - | 1812 | WP_001069467.1 | phosphogluconate dehydratase | - |
| CXX05_RS07700 () | 1546239..1547714 | - | 1476 | WP_000301727.1 | glucose-6-phosphate dehydrogenase | - |
| CXX05_RS07705 () | 1548052..1548921 | + | 870 | WP_001056694.1 | DNA-binding transcriptional regulator HexR | - |
| CXX05_RS07710 () | 1549049..1550491 | + | 1443 | WP_000091176.1 | pyruvate kinase | - |
| CXX05_RS07715 () | 1550622..1551593 | - | 972 | WP_000448381.1 | Lipid A biosynthesis myristoyltransferase | VF |
| CXX05_RS07720 () | 1551713..1553035 | - | 1323 | WP_001184045.1 | murein DD-endopeptidase MepM | - |
| CXX05_RS07725 () | 1553051..1553983 | - | 933 | WP_001300644.1 | zinc ABC transporter substrate-binding protein ZnuA | - |
| CXX05_RS07730 () | 1554062..1554817 | + | 756 | WP_000202996.1 | Zinc import ATP-binding protein ZnuC | VF |
| CXX05_RS07735 () | 1554814..1555599 | + | 786 | WP_000571465.1 | High-affinity zinc uptake system membrane protein ZnuB | VF |
| CXX05_RS07740 () | 1555746..1556756 | - | 1011 | WP_000568519.1 | Holliday junction branch migration DNA helicase RuvB | - |
| CXX05_RS07745 () | 1556765..1557376 | - | 612 | WP_000580328.1 | Holliday junction branch migration protein RuvA | - |
| CXX05_RS07750 () | 1557515..1557580 | - | 66 | WP_001386853.1 | stress response small protein YobI | - |
| CXX05_RS07755 () | 1557651..1558253 | + | 603 | WP_001297431.1 | YebB family permuted papain-like enzyme | - |
| CXX05_RS07760 () | 1558255..1558776 | - | 522 | WP_001295503.1 | crossover junction endodeoxyribonuclease RuvC | - |
| CXX05_RS07765 () | 1558811..1559551 | - | 741 | WP_000907248.1 | putative transcriptional regulatory protein YebC | VF |
| CXX05_RS07770 () | 1559580..1560032 | - | 453 | WP_032157611.1 | dihydroneopterin triphosphate diphosphatase | - |
| CXX05_RS07775 () | 1560150..1561922 | - | 1773 | WP_001258662.1 | aspartate--tRNA ligase | - |
| CXX05_RS07780 () | 1562232..1562798 | + | 567 | WP_000891620.1 | hydrolase | - |
| CXX05_RS07785 () | 1562795..1563289 | + | 495 | WP_000639268.1 | DUF72 domain-containing protein | - |
| CXX05_RS07790 () | 1563343..1564422 | + | 1080 | Protein_1490 | hypothetical protein ; Integrase | Integrase |
| CXX05_RS07795 () | 1564519..1565747 | + | 1229 | WP_164543926.1 | IS3 family transposase IS2 | Transposase |
| CXX05_RS07800 () | 1565762..1566202 | + | 441 | Protein_1492 | recombinase family protein | - |
| CXX05_RS07810 () | 1566556..1567253 | + | 698 | Protein_1493 | IS1 family transposase IS1R | Transposase |
| CXX05_RS07815 () | 1567270..1567767 | - | 498 | Protein_1494 | hypothetical protein | - |
| CXX05_RS07820 () | 1567925..1568497 | - | 573 | Protein_1495 | phage tail tape measure protein | - |
| CXX05_RS07830 () | 1568584..1569606 | + | 1023 | WP_001297099.1 | IS21 family transposase IS100kyp | Transposase |
| CXX05_RS07835 () | 1569603..1570385 | + | 783 | WP_001317493.1 | IS21 family transposase IS100kyp | Transposase |
| CXX05_RS07845 () | 1570448..1571923 | - | 1476 | Protein_1498 | tape measure protein | - |
| CXX05_RS07850 () | 1572100..1572318 | - | 219 | WP_000272722.1 | hypothetical protein | - |
| CXX05_RS07855 () | 1572343..1573053 | - | 711 | WP_001716639.1 | hypothetical protein | - |
| CXX05_RS07860 () | 1573577..1573900 | - | 324 | WP_001716640.1 | hypothetical protein | - |
| CXX05_RS07865 () | 1574038..1574424 | - | 387 | WP_001716641.1 | hypothetical protein | - |
| CXX05_RS07870 () | 1574424..1574706 | - | 283 | Protein_1503 | hypothetical protein | - |
| CXX05_RS07875 () | 1574708..1575262 | - | 555 | WP_001716643.1 | hypothetical protein | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|