MGE detailed information
MGE type: Integrative_Conjugative_Elements MGE length: 90305 bp
Accession: NZ_CP025869 Location: 2064260..2154564 Organism: Escherichia coli strain 503829 Replicon: chromosome
Accession: NZ_CP025869 Location: 2064260..2154564 Organism: Escherichia coli strain 503829 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| CXX08_RS10060 () | 2060058..2061332 | + | 1275 | WP_001107167.1 | histidine--tRNA ligase | - |
| CXX08_RS10065 () | 2061350..2061970 | + | 621 | WP_000409205.1 | ancillary SecYEG translocon subunit YfgM | - |
| CXX08_RS10070 () | 2061981..2063159 | + | 1179 | WP_001177043.1 | outer membrane protein assembly factor BamB | - |
| CXX08_RS10075 () | 2063277..2064749 | + | 1473 | WP_000249410.1 | ribosome biogenesis GTPase Der | - |
| CXX08_RS10080 () | 2064818..2065033 | + | 216 | WP_001297332.1 | zinc ribbon domain-containing protein | - |
| CXX08_RS10085 () | 2065030..2066400 | - | 1371 | WP_000937933.1 | exodeoxyribonuclease VII large subunit | - |
| CXX08_RS10090 () | 2066562..2068028 | + | 1467 | WP_001299507.1 | IMP dehydrogenase | - |
| CXX08_RS10095 () | 2068097..2069674 | + | 1578 | WP_000138282.1 | glutamine-hydrolyzing GMP synthase | - |
| CXX08_RS10100 () | 2069983..2071191 | + | 1209 | WP_001297323.1 | site-specific integrase | - |
| CXX08_RS10105 () | 2071474..2071704 | + | 231 | WP_021542196.1 | AlpA family phage regulatory protein | - |
| CXX08_RS10110 () | 2071785..2072843 | + | 1059 | WP_001297333.1 | replication initiator protein A | - |
| CXX08_RS25860 () | 2073173..2073409 | + | 237 | WP_187440167.1 | hypothetical protein | - |
| CXX08_RS10120 () | 2074150..2074458 | - | 309 | WP_001297325.1 | hypothetical protein | - |
| CXX08_RS10125 () | 2074625..2076124 | - | 1500 | WP_021542195.1 | P-type conjugative transfer protein TrbL | - |
| CXX08_RS10130 () | 2076166..2076348 | - | 183 | WP_024171813.1 | hypothetical protein | - |
| CXX08_RS10135 () | 2076351..2077142 | - | 792 | WP_001297334.1 | P-type conjugative transfer protein TrbJ | - |
| CXX08_RS10140 () | 2077413..2077637 | - | 225 | WP_001716819.1 | hypothetical protein | - |
| CXX08_RS10145 () | 2077640..2077849 | - | 210 | WP_000101768.1 | hypothetical protein | - |
| CXX08_RS10155 () | 2078586..2079662 | + | 1077 | WP_001297336.1 | SIR2 family protein | - |
| CXX08_RS10160 () | 2079670..2081460 | + | 1791 | WP_001297331.1 | ATP-binding protein | - |
| CXX08_RS10165 () | 2081522..2081719 | + | 198 | WP_001297329.1 | hypothetical protein | - |
| CXX08_RS10170 () | 2081913..2082098 | - | 186 | Protein_1928 | DUF5384 family protein | - |
| CXX08_RS10180 () | 2082185..2083207 | + | 1023 | WP_000255946.1 | IS21-like element IS100 family transposase | - |
| CXX08_RS10185 () | 2083204..2083986 | + | 783 | WP_014640011.1 | IS21-like element IS100kyp family helper ATPase IstB | - |
| CXX08_RS10195 () | 2084037..2084411 | - | 375 | WP_001716815.1 | DUF5384 family protein | - |
| CXX08_RS10200 () | 2084427..2084945 | - | 519 | WP_001295476.1 | glycine zipper 2TM domain-containing protein | - |
| CXX08_RS10205 () | 2085256..2085447 | - | 192 | WP_000076001.1 | DUF2633 family protein | - |
| CXX08_RS25865 () | 2085465..2085617 | + | 153 | WP_000017552.1 | hypothetical protein | - |
| CXX08_RS10210 () | 2085799..2088042 | + | 2244 | WP_000772775.1 | cyclic-guanylate-specific phosphodiesterase PdeF | - |
| CXX08_RS10215 () | 2088081..2089622 | - | 1542 | WP_001121363.1 | exopolyphosphatase | - |
| CXX08_RS10220 () | 2089627..2091693 | - | 2067 | WP_000529576.1 | polyphosphate kinase 1 | - |
| CXX08_RS10225 () | 2091864..2092502 | - | 639 | WP_001028614.1 | phosphoribosylglycinamide formyltransferase | - |
| CXX08_RS10230 () | 2092502..2093539 | - | 1038 | WP_001295474.1 | phosphoribosylformylglycinamidine cyclo-ligase | - |
| CXX08_RS10235 () | 2093864..2094490 | + | 627 | WP_001295473.1 | uracil phosphoribosyltransferase | - |
| CXX08_RS10240 () | 2094576..2095865 | + | 1290 | WP_000198328.1 | uracil permease | - |
| CXX08_RS10245 () | 2095915..2096661 | + | 747 | WP_000247065.1 | DnaA inactivator Hda | - |
| CXX08_RS10250 () | 2096799..2097158 | - | 360 | WP_000166449.1 | arsenate reductase (glutaredoxin) | - |
| CXX08_RS10255 () | 2097179..2098642 | - | 1464 | WP_000489667.1 | beta-barrel assembly-enhancing protease | - |
| CXX08_RS10260 () | 2098855..2099916 | + | 1062 | WP_000892044.1 | AI-2E family transporter | - |
| CXX08_RS10265 () | 2099954..2100178 | - | 225 | WP_001330935.1 | formate/nitrite transporter family protein | - |
| CXX08_RS10270 () | 2100070..2100801 | - | 732 | WP_001244769.1 | formate transporter | - |
| CXX08_RS10275 () | 2100823..2102835 | - | 2013 | WP_001251558.1 | DNA-binding transcriptional regulator HyfR | - |
| CXX08_RS10280 () | 2102865..2103278 | - | 414 | WP_000796789.1 | hydrogenase 4 assembly chaperone HyfJ | - |
| CXX08_RS10285 () | 2103271..2104029 | - | 759 | WP_001297696.1 | hydrogenase 4 catalytic subunit HyfI | - |
| CXX08_RS10290 () | 2104026..2104565 | - | 540 | WP_000916082.1 | hydrogenase 4 subunit H | - |
| CXX08_RS10295 () | 2104575..2106290 | - | 1716 | WP_001297839.1 | hydrogenase 4 catalytic subunit HyfG | - |
| CXX08_RS10300 () | 2106280..2107859 | - | 1580 | Protein_1953 | hydrogenase 4 subunit F | - |
| CXX08_RS10305 () | 2107864..2108514 | - | 651 | WP_000147987.1 | hydrogenase 4 membrane subunit | - |
| CXX08_RS10310 () | 2108526..2109633 | - | 1108 | Protein_1955 | hydrogenase 4 subunit D | - |
| CXX08_RS10315 () | 2109645..2109755 | - | 111 | WP_000429115.1 | hypothetical protein | - |
| CXX08_RS10320 () | 2109772..2110716 | - | 945 | WP_001297317.1 | hydrogenase 4 subunit HyfC | - |
| CXX08_RS10325 () | 2110727..2112744 | - | 2018 | Protein_1958 | hydrogenase 4 subunit B | - |
| CXX08_RS10330 () | 2112744..2113361 | - | 618 | WP_001295470.1 | hydrogenase 4 subunit HyfA | - |
| CXX08_RS10335 () | 2113614..2114084 | - | 471 | WP_001068682.1 | thioredoxin-dependent thiol peroxidase | - |
| CXX08_RS10340 () | 2114084..2114656 | - | 573 | WP_000176187.1 | glycine cleavage system transcriptional repressor | - |
| CXX08_RS10345 () | 2114802..2115680 | + | 879 | WP_001295469.1 | 4-hydroxy-tetrahydrodipicolinate synthase | - |
| CXX08_RS10350 () | 2115697..2116731 | + | 1035 | WP_001297320.1 | outer membrane protein assembly factor BamC | - |
| CXX08_RS10355 () | 2116944..2117657 | + | 714 | WP_001295467.1 | phosphoribosylaminoimidazolesuccinocarboxamide synthase | - |
| CXX08_RS10360 () | 2117813..2118040 | + | 228 | WP_000450524.1 | toxin-antitoxin system antitoxin VapB | Antitoxin Detail |
| CXX08_RS10365 () | 2118040..2118438 | + | 399 | WP_000911329.1 | tRNA(fMet)-specific endonuclease VapC | Toxin Detail |
| CXX08_RS10370 () | 2118585..2119448 | + | 864 | WP_001267507.1 | neutral zinc metallopeptidase | - |
| CXX08_RS10375 () | 2119463..2121478 | + | 2016 | WP_000829332.1 | tRNA cytosine(34) acetyltransferase TmcA | - |
| CXX08_RS10380 () | 2121552..2122250 | + | 699 | WP_000679812.1 | esterase | - |
| CXX08_RS10385 () | 2122360..2122560 | - | 201 | WP_000383836.1 | YpfN family protein | - |
| CXX08_RS10390 () | 2122588..2123715 | - | 1128 | WP_001277809.1 | succinyl-diaminopimelate desuccinylase | - |
| CXX08_RS10395 () | 2123719..2124075 | - | 357 | WP_000258247.1 | ArsC family reductase | - |
| CXX08_RS10400 () | 2124456..2124515 | + | 60 | WP_001386977.1 | protein YpfM | - |
| CXX08_RS10405 () | 2124614..2127727 | - | 3114 | WP_001273141.1 | multidrug efflux RND transporter permease AcrD | - |
| CXX08_RS10410 () | 2127891..2129591 | - | 1701 | WP_000636129.1 | nitrate/nitrite two-component system sensor histidine kinase NarQ | - |
| CXX08_RS10415 () | 2129797..2131776 | + | 1980 | WP_024171812.1 | formate-dependent uric acid utilization protein AegA | - |
| CXX08_RS10420 () | 2131844..2132419 | + | 576 | WP_000193711.1 | GDP-mannose pyrophosphatase NudK | - |
| CXX08_RS10425 () | 2132545..2133588 | + | 1044 | WP_001270524.1 | DUF1176 domain-containing protein | - |
| CXX08_RS10430 () | 2133684..2135687 | - | 2004 | WP_001297319.1 | transketolase | - |
| CXX08_RS10435 () | 2135707..2136657 | - | 951 | WP_001716810.1 | transaldolase | - |
| CXX08_RS10440 () | 2136946..2139225 | + | 2280 | WP_000342642.1 | NADP-dependent oxaloacetate-decarboxylating malate dehydrogenase | - |
| CXX08_RS10445 () | 2139383..2140080 | + | 698 | Protein_1982 | IS1 family transposase | - |
| CXX08_RS10450 () | 2140295..2140630 | + | 336 | WP_000356956.1 | ethanolamine utilization microcompartment protein EutS | - |
| CXX08_RS10455 () | 2140643..2141122 | + | 480 | WP_000820764.1 | ethanolamine utilization acetate kinase EutP | - |
| CXX08_RS10460 () | 2141097..2141798 | + | 702 | WP_000733906.1 | ethanolamine utilization acetate kinase EutQ | - |
| CXX08_RS10465 () | 2141795..2142598 | + | 804 | WP_000651298.1 | ethanolamine utilization cob(I)yrinic acid a,c-diamide adenosyltransferase EutT | - |
| CXX08_RS10470 () | 2142595..2143611 | + | 1017 | WP_000582977.1 | phosphate acetyltransferase | - |
| CXX08_RS10475 () | 2143650..2143943 | + | 294 | WP_000387713.1 | ethanolamine utilization microcompartment protein EutM | - |
| CXX08_RS10480 () | 2144050..2144337 | + | 288 | WP_000762196.1 | ethanolamine utilization microcompartment protein EutN | - |
| CXX08_RS10485 () | 2144349..2145758 | + | 1410 | WP_001075691.1 | aldehyde dehydrogenase EutE | - |
| CXX08_RS10490 () | 2145769..2146605 | + | 837 | WP_000929709.1 | ethanolamine utilization protein EutJ | - |
| CXX08_RS10495 () | 2146595..2147782 | + | 1188 | WP_001297322.1 | ethanolamine utilization ethanol dehydrogenase EutG | - |
| CXX08_RS10500 () | 2147899..2149125 | + | 1227 | WP_000512374.1 | ethanolamine utilization protein EutH | - |
| CXX08_RS10505 () | 2149122..2150525 | + | 1404 | WP_001097450.1 | ethanolamine ammonia-lyase reactivating factor EutA | - |
| CXX08_RS10510 () | 2150537..2151898 | + | 1362 | WP_000769961.1 | ethanolamine ammonia-lyase subunit alpha | - |
| CXX08_RS10515 () | 2151919..2152806 | + | 888 | WP_000372364.1 | ethanolamine ammonia-lyase subunit beta | - |
| CXX08_RS10520 () | 2152816..2153475 | + | 660 | WP_001111038.1 | ethanolamine utilization microcompartment protein EutL | - |
| CXX08_RS10525 () | 2153488..2153988 | + | 501 | WP_000606257.1 | ethanolamine utilization microcompartment protein EutK | - |
| CXX08_RS10530 () | 2154034..2155086 | + | 1053 | WP_000753700.1 | HTH-type transcriptional regulator EutR | - |
| CXX08_RS10535 () | 2155092..2155991 | - | 900 | WP_000801367.1 | oxygen-dependent coproporphyrinogen oxidase | - |
| CXX08_RS10540 () | 2155995..2156864 | - | 870 | WP_000102891.1 | N-acetylmuramoyl-L-alanine amidase AmiA | - |
| CXX08_RS10545 () | 2157078..2157503 | + | 426 | WP_000406000.1 | GNAT family acetyltransferase | - |
| CXX08_RS10550 () | 2157490..2157939 | + | 450 | WP_001307326.1 | DUF2919 domain-containing protein | - |
| CXX08_RS10555 () | 2158000..2158575 | + | 576 | WP_000838945.1 | RpoE-regulated lipoprotein | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|