MGE detailed information
MGE type: Integrative_Conjugative_Elements MGE length: 126556 bp
Accession: NZ_CP025862 Location: 3695172..3821727 Organism: Escherichia coli strain 504237 Replicon: chromosome
Accession: NZ_CP025862 Location: 3695172..3821727 Organism: Escherichia coli strain 504237 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| CXX10_RS26485 () | 3691015..3691098 | - | 84 | WP_211180506.1 | protein YqgH | - |
| CXX10_RS18325 () | 3691251..3691958 | + | 708 | WP_000234514.1 | DUF554 domain-containing protein | - |
| CXX10_RS18335 () | 3692337..3693599 | + | 1263 | WP_126123784.1 | integrase arm-type DNA-binding domain-containing protein | - |
| CXX10_RS18340 () | 3693961..3694395 | + | 435 | WP_001403014.1 | IS66 family insertion sequence hypothetical protein | - |
| CXX10_RS18345 () | 3694392..3694742 | + | 351 | WP_000624688.1 | IS66 family insertion sequence element accessory protein TnpB | - |
| CXX10_RS18350 () | 3694773..3696386 | + | 1614 | WP_001744949.1 | IS66-like element ISEc47 family transposase | - |
| CXX10_RS18355 () | 3696600..3700115 | + | 3516 | WP_000344100.1 | ATP-binding protein | - |
| CXX10_RS18360 () | 3700224..3701399 | - | 1176 | Protein_3527 | phosphoethanolamine transferase | - |
| CXX10_RS18365 () | 3701464..3702246 | - | 783 | WP_077822344.1 | IS21 family transposase IS100kyp | Transposase |
| CXX10_RS18370 () | 3702243..3703265 | - | 1023 | WP_001356151.1 | IS21 family transposase IS100kyp | Transposase |
| CXX10_RS18390 () | 3703961..3704395 | - | 435 | WP_001355913.1 | zinc-ribbon domain-containing protein | - |
| CXX10_RS18395 () | 3704383..3704784 | - | 402 | WP_000271008.1 | hypothetical protein | - |
| CXX10_RS18400 () | 3705043..3705612 | - | 570 | WP_001399348.1 | inovirus Gp2 family protein | - |
| CXX10_RS18410 () | 3706239..3706388 | - | 150 | WP_071528377.1 | hemolysin activation protein | - |
| CXX10_RS26345 () | 3707160..3707366 | + | 207 | WP_001095912.1 | AlpA family transcriptional regulator | - |
| CXX10_RS18420 () | 3707452..3708024 | + | 573 | WP_001170556.1 | hypothetical protein | - |
| CXX10_RS18425 () | 3708139..3709644 | - | 1506 | WP_001399351.1 | DUF3987 domain-containing protein | - |
| CXX10_RS18430 () | 3710829..3711701 | + | 873 | WP_001554870.1 | GTPase family protein | - |
| CXX10_RS18435 () | 3712074..3714920 | + | 2847 | WP_001745453.1 | Ag43/Cah family autotransporter adhesin | - |
| CXX10_RS18450 () | 3715313..3715990 | + | 678 | WP_001711999.1 | IS66 family transposase ISCro1 | Transposase |
| CXX10_RS18455 () | 3715990..3716337 | + | 348 | WP_000624622.1 | IS66 family transposase ISCro1 | Transposase |
| CXX10_RS18460 () | 3716357..3717928 | + | 1572 | WP_000381395.1 | IS66 family transposase ISCro1 | Transposase |
| CXX10_RS18465 () | 3717943..3718773 | + | 831 | WP_024172271.1 | DUF945 domain-containing protein | - |
| CXX10_RS18470 () | 3718773..3719042 | + | 270 | WP_001183319.1 | hypothetical protein | - |
| CXX10_RS18475 () | 3719111..3719584 | + | 474 | WP_001355870.1 | antirestriction protein | - |
| CXX10_RS18480 () | 3719600..3720076 | + | 477 | WP_001502867.1 | RadC family protein | - |
| CXX10_RS18485 () | 3720139..3720360 | + | 222 | WP_000692327.1 | DUF987 domain-containing protein | - |
| CXX10_RS18490 () | 3720379..3721023 | + | 645 | WP_000086771.1 | hypothetical protein | - |
| CXX10_RS18495 () | 3721073..3721447 | + | 375 | WP_032190265.1 | type IV toxin-antitoxin system YeeU family antitoxin | Antitoxin Detail |
| CXX10_RS18500 () | 3721494..3721871 | + | 378 | WP_000854733.1 | TA system toxin CbtA family protein | Toxin Detail |
| CXX10_RS18505 () | 3721868..3722356 | + | 489 | WP_000761663.1 | hypothetical protein | - |
| CXX10_RS18510 () | 3722368..3722565 | + | 198 | WP_000839243.1 | DUF957 domain-containing protein | - |
| CXX10_RS26350 () | 3722654..3723502 | + | 849 | Protein_3552 | DUF4942 domain-containing protein | - |
| CXX10_RS18530 () | 3723573..3725108 | + | 1536 | WP_000484448.1 | hypothetical protein | VF |
| CXX10_RS18535 () | 3725443..3725979 | - | 537 | WP_000942799.1 | hypothetical protein | VF |
| CXX10_RS18540 () | 3725981..3727159 | - | 1179 | WP_000094971.1 | hypothetical protein | VF |
| CXX10_RS18545 () | 3727156..3728133 | - | 978 | WP_000633221.1 | hypothetical protein | VF |
| CXX10_RS18550 () | 3728136..3728735 | - | 600 | WP_001255040.1 | hypothetical protein | VF |
| CXX10_RS18555 () | 3728732..3729103 | - | 372 | WP_000820117.1 | hypothetical protein | VF |
| CXX10_RS18560 () | 3729100..3729663 | - | 564 | WP_001115154.1 | hypothetical protein | VF |
| CXX10_RS18565 () | 3729667..3730122 | - | 456 | WP_000287130.1 | hypothetical protein | VF |
| CXX10_RS18570 () | 3730139..3731362 | - | 1224 | WP_001173448.1 | hypothetical protein | VF |
| CXX10_RS18575 () | 3731362..3732855 | - | 1494 | WP_000249348.1 | hypothetical protein | VF |
| CXX10_RS18580 () | 3732855..3734915 | - | 2061 | WP_000498836.1 | hypothetical protein | VF |
| CXX10_RS18585 () | 3734945..3735904 | - | 960 | WP_000135062.1 | hypothetical protein | VF |
| CXX10_RS18590 () | 3735922..3736332 | - | 411 | WP_001324279.1 | type II secretion system pilot lipoprotein GspS-beta | - |
| CXX10_RS18595 () | 3736398..3737207 | - | 810 | WP_001331203.1 | hypothetical protein | VF |
| CXX10_RS18600 () | 3737355..3741917 | - | 4563 | WP_001034492.1 | hypothetical protein | VF |
| CXX10_RS18605 () | 3742403..3744085 | - | 1683 | WP_000259303.1 | glycolate permease GlcA | - |
| CXX10_RS18610 () | 3744441..3746612 | - | 2172 | WP_000084062.1 | malate synthase G | - |
| CXX10_RS18615 () | 3746634..3747038 | - | 405 | WP_000853256.1 | protein GlcG | - |
| CXX10_RS18620 () | 3747043..3748266 | - | 1224 | WP_001194679.1 | glycolate oxidase subunit GlcF | - |
| CXX10_RS18625 () | 3748277..3749329 | - | 1053 | WP_000943059.1 | glycolate oxidase subunit GlcE | - |
| CXX10_RS18630 () | 3749329..3750828 | - | 1500 | WP_000026117.1 | glycolate oxidase subunit GlcD | - |
| CXX10_RS18635 () | 3751079..3751843 | + | 765 | WP_001297764.1 | transcriptional regulator GlcC | - |
| CXX10_RS18640 () | 3751850..3752992 | - | 1143 | WP_000388786.1 | DNA-binding protein | - |
| CXX10_RS18645 () | 3753363..3755084 | + | 1722 | WP_001355868.1 | 2-succinylbenzoate--CoA ligase | VF |
| CXX10_RS18650 () | 3755081..3755995 | + | 915 | WP_001077135.1 | NAD-dependent epimerase/dehydratase family protein | - |
| CXX10_RS18655 () | 3756027..3756275 | + | 249 | WP_000248092.1 | acyl carrier protein | - |
| CXX10_RS18660 () | 3756275..3757447 | + | 1173 | WP_000524972.1 | 8-amino-7-oxononanoate synthase | VF |
| CXX10_RS18665 () | 3757483..3758562 | - | 1080 | WP_001300858.1 | LPS export ABC transporter permease LptG | - |
| CXX10_RS18670 () | 3758559..3759629 | - | 1071 | WP_000779661.1 | LPS export ABC transporter permease LptF | - |
| CXX10_RS18675 () | 3759660..3760220 | - | 561 | WP_001299422.1 | YtfJ family protein | - |
| CXX10_RS18680 () | 3760232..3761056 | - | 825 | WP_000984999.1 | hypothetical protein | - |
| CXX10_RS18685 () | 3761056..3762405 | - | 1350 | WP_000896885.1 | lipopolysaccharide biosynthesis protein | - |
| CXX10_RS18690 () | 3762451..3763209 | - | 759 | WP_000339532.1 | hypothetical protein | - |
| CXX10_RS18695 () | 3763241..3763954 | - | 714 | WP_001076260.1 | thymidylate kinase | - |
| CXX10_RS18700 () | 3764128..3764820 | + | 693 | WP_001190787.1 | thymidylate kinase | - |
| CXX10_RS18705 () | 3764869..3766368 | - | 1500 | WP_000933274.1 | inorganic phosphate transporter PitB | - |
| CXX10_RS18710 () | 3766660..3768519 | - | 1860 | WP_001297309.1 | bifunctional glutathionylspermidine amidase/synthase | - |
| CXX10_RS18715 () | 3768724..3769590 | + | 867 | WP_001352536.1 | glutathione-dependent disulfide-bond oxidoreductase | - |
| CXX10_RS18725 () | 3769890..3770870 | + | 981 | WP_000399589.1 | IS110 family transposase IS621 | Transposase |
| CXX10_RS18730 () | 3771100..3771984 | - | 885 | WP_000018760.1 | 3-phenylpropionate-dihydrodiol/cinnamic acid-dihydrodiol dehydrogenase | VF |
| CXX10_RS18735 () | 3772175..3772669 | + | 495 | WP_000439331.1 | TIGR00645 family protein | - |
| CXX10_RS18740 () | 3772709..3773749 | - | 1041 | WP_000262156.1 | L-glyceraldehyde 3-phosphate reductase | - |
| CXX10_RS18745 () | 3773906..3774793 | + | 888 | WP_001297303.1 | dienelactone hydrolase family protein | - |
| CXX10_RS18750 () | 3774912..3775199 | + | 288 | WP_001059136.1 | DUF2623 domain-containing protein | - |
| CXX10_RS18755 () | 3775388..3776506 | + | 1119 | WP_000145410.1 | hydrogenase 2 small subunit | - |
| CXX10_RS18760 () | 3776509..3777495 | + | 987 | WP_001081870.1 | hydrogenase 2 operon protein HybA | - |
| CXX10_RS18765 () | 3777485..3778663 | + | 1179 | WP_000017694.1 | Ni/Fe-hydrogenase cytochrome b subunit | - |
| CXX10_RS18770 () | 3778660..3780363 | + | 1704 | WP_000083065.1 | hydrogenase 2 large subunit | - |
| CXX10_RS18775 () | 3780363..3780857 | + | 495 | WP_001221946.1 | HyaD/HybD family hydrogenase maturation endopeptidase | - |
| CXX10_RS18780 () | 3780850..3781338 | + | 489 | WP_000134014.1 | hydrogenase-2 assembly chaperone | - |
| CXX10_RS18785 () | 3781331..3781672 | + | 342 | WP_000544953.1 | hydrogenase maturation nickel metallochaperone HypA | - |
| CXX10_RS18790 () | 3781685..3781933 | + | 249 | WP_000334896.1 | hydrogenase maturation factor HybG | - |
| CXX10_RS18795 () | 3782055..3783035 | - | 981 | WP_000399589.1 | IS110 family transposase IS621 | Transposase |
| CXX10_RS18805 () | 3783376..3783801 | - | 426 | WP_001240712.1 | TonB system transport protein ExbD | - |
| CXX10_RS18810 () | 3783808..3784542 | - | 735 | WP_000527844.1 | tol-pal system-associated acyl-CoA thioesterase | - |
| CXX10_RS18815 () | 3784794..3785981 | + | 1188 | WP_000763931.1 | cystathionine beta-lyase | - |
| CXX10_RS18820 () | 3786121..3786780 | + | 660 | WP_000268419.1 | DedA family protein | - |
| CXX10_RS18825 () | 3786820..3787719 | - | 900 | WP_000817717.1 | DNA-binding transcriptional regulator YqhC | - |
| CXX10_RS18830 () | 3787913..3789076 | + | 1164 | WP_001058807.1 | alcohol dehydrogenase | - |
| CXX10_RS18835 () | 3789181..3790008 | + | 828 | WP_000013149.1 | 2,5-didehydrogluconate reductase DkgA | - |
| CXX10_RS18840 () | 3790208..3791134 | + | 927 | WP_000691598.1 | YbjP/YqhG family protein | - |
| CXX10_RS18845 () | 3791185..3791442 | + | 258 | WP_000848528.1 | lipoprotein YqhH | - |
| CXX10_RS18850 () | 3791485..3793704 | - | 2220 | WP_000095187.1 | YgiQ family radical SAM protein | - |
| CXX10_RS18855 () | 3793815..3795227 | - | 1413 | WP_000059395.1 | cell division protein FtsP | - |
| CXX10_RS18860 () | 3795302..3796039 | - | 738 | WP_000965712.1 | 1-acylglycerol-3-phosphate O-acyltransferase | - |
| CXX10_RS18865 () | 3796272..3798530 | - | 2259 | WP_001281881.1 | DNA topoisomerase IV subunit A | - |
| CXX10_RS18870 () | 3799076..3799558 | - | 483 | WP_000183494.1 | transcriptional regulator | - |
| CXX10_RS18875 () | 3799611..3800003 | - | 393 | WP_000712658.1 | OB fold stress tolerance protein YgiW | - |
| CXX10_RS18880 () | 3800155..3800814 | + | 660 | WP_001221502.1 | Regulator of RpoS | VF |
| CXX10_RS18885 () | 3800811..3802160 | + | 1350 | WP_000673354.1 | two-component system sensor histidine kinase QseC | - |
| CXX10_RS18890 () | 3802206..3802538 | - | 333 | WP_000912120.1 | DUF2645 family protein | - |
| CXX10_RS18895 () | 3802857..3803438 | + | 582 | WP_001399401.1 | NADPH:quinone oxidoreductase MdaB | - |
| CXX10_RS18900 () | 3803469..3803783 | + | 315 | WP_000958598.1 | antibiotic biosynthesis monooxygenase | - |
| CXX10_RS18905 () | 3803831..3805723 | - | 1893 | WP_000195296.1 | DNA topoisomerase IV subunit B | - |
| CXX10_RS18910 () | 3805752..3806333 | - | 582 | WP_000105733.1 | esterase YqiA | - |
| CXX10_RS18915 () | 3806333..3807160 | - | 828 | WP_000444747.1 | 3',5'-cyclic-AMP phosphodiesterase | - |
| CXX10_RS18920 () | 3807185..3807607 | - | 423 | WP_000833393.1 | DUF1249 family protein | - |
| CXX10_RS18925 () | 3807608..3808237 | - | 630 | WP_000917117.1 | ADP-ribose diphosphatase | - |
| CXX10_RS18930 () | 3808442..3809923 | + | 1482 | WP_000735278.1 | outer membrane channel protein TolC | - |
| CXX10_RS18935 () | 3810071..3810742 | + | 672 | WP_001399404.1 | DUF1190 family protein | - |
| CXX10_RS18940 () | 3810748..3811908 | + | 1161 | WP_000442860.1 | glutathionylspermidine synthase family protein | - |
| CXX10_RS18945 () | 3811946..3812734 | - | 789 | WP_001299419.1 | 4,5-DOPA dioxygenase extradiol | - |
| CXX10_RS18950 () | 3812877..3813650 | + | 774 | WP_001295627.1 | zinc transporter ZupT | - |
| CXX10_RS26190 () | 3813708..3813878 | - | 171 | WP_000469266.1 | hypothetical protein | - |
| CXX10_RS18955 () | 3814139..3814792 | - | 654 | WP_001076997.1 | 3,4-dihydroxy-2-butanone-4-phosphate synthase | - |
| CXX10_RS18960 () | 3815166..3815456 | + | 291 | WP_001297598.1 | IS1182 family transposase ISBusp4 | Transposase |
| CXX10_RS18965 () | 3815739..3816290 | + | 552 | WP_001272149.1 | hypothetical protein | VF |
| CXX10_RS18970 () | 3816350..3818854 | + | 2505 | WP_000277130.1 | hypothetical protein | VF |
| CXX10_RS18975 () | 3818870..3819619 | + | 750 | WP_001399406.1 | hypothetical protein | VF |
| CXX10_RS18980 () | 3819621..3820685 | + | 1065 | WP_001269793.1 | fimbrial protein | - |
| CXX10_RS18985 () | 3820728..3820928 | - | 201 | WP_000350095.1 | cell surface composition regulator GlgS | - |
| CXX10_RS18990 () | 3821197..3821826 | + | 630 | WP_000599947.1 | DUF1449 family protein | - |
| CXX10_RS18995 () | 3821853..3823514 | + | 1662 | WP_000341046.1 | flotillin family protein | - |
| - () | 3823711..3823852 | - | 142 | NuclAT_1 | - | - |
| - () | 3823711..3823852 | - | 142 | NuclAT_1 | - | - |
| - () | 3823711..3823852 | - | 142 | NuclAT_1 | - | - |
| - () | 3823711..3823852 | - | 142 | NuclAT_1 | - | - |
| - () | 3823711..3823852 | - | 142 | NuclAT_7 | - | - |
| - () | 3823711..3823852 | - | 142 | NuclAT_7 | - | - |
| - () | 3823711..3823852 | - | 142 | NuclAT_7 | - | - |
| - () | 3823711..3823852 | - | 142 | NuclAT_7 | - | - |
| CXX10_RS19000 () | 3823753..3823812 | + | 60 | WP_100249846.1 | type I toxin-antitoxin system Ibs family toxin | - |
| - () | 3824087..3824228 | - | 142 | NuclAT_6 | - | - |
| - () | 3824087..3824228 | - | 142 | NuclAT_6 | - | - |
| - () | 3824087..3824228 | - | 142 | NuclAT_6 | - | - |
| - () | 3824087..3824228 | - | 142 | NuclAT_6 | - | - |
| CXX10_RS19005 () | 3824129..3824188 | + | 60 | WP_001387082.1 | type I toxin-antitoxin system Ibs family toxin | - |
| CXX10_RS19010 () | 3824308..3825741 | - | 1434 | WP_000869178.1 | bifunctional D-glycero-beta-D-manno-heptose-7-phosphate kinase/D-glycero-beta-D-manno-heptose 1-phosphate adenylyltransferase HldE | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|