MGE detailed information
MGE type: Prophage MGE length: 55198 bp
Accession: NZ_CP025862 Location: 2100076..2155273 Organism: Escherichia coli strain 504237 Replicon: chromosome
Accession: NZ_CP025862 Location: 2100076..2155273 Organism: Escherichia coli strain 504237 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| CXX10_RS10270 () | 2096589..2097335 | + | 747 | WP_000636571.1 | bifunctional NADP-dependent 3-hydroxy acid dehydrogenase/3-hydroxypropionate dehydrogenase YdfG | - |
| CXX10_RS10275 () | 2097424..2098110 | + | 687 | WP_000215549.1 | DNA-binding transcriptional regulator YdfH | - |
| CXX10_RS10280 () | 2098288..2098491 | + | 204 | WP_000214712.1 | putative selenium delivery protein YdfZ | - |
| CXX10_RS10285 () | 2098527..2099987 | - | 1461 | WP_000527797.1 | mannitol dehydrogenase family protein | - |
| CXX10_RS10290 () | 2100076..2101359 | - | 1284 | Protein_1985 | MHS family MFS transporter YdfJ | - |
| CXX10_RS10295 () | 2101419..2101496 | + | 78 | Protein_1986 | DinI family protein | - |
| CXX10_RS10300 () | 2101579..2102145 | - | 567 | WP_001165996.1 | DUF4376 domain-containing protein | - |
| CXX10_RS10305 () | 2102356..2104110 | - | 1755 | Protein_1988 | prophage tail fiber N-terminal domain-containing protein | - |
| CXX10_RS10310 () | 2104175..2104774 | - | 600 | WP_001233545.1 | hypothetical protein | VF |
| CXX10_RS10315 () | 2104842..2108237 | - | 3396 | WP_095908820.1 | host specificity protein J | - |
| CXX10_RS10320 () | 2108298..2108900 | - | 603 | WP_024254791.1 | tail assembly protein | - |
| CXX10_RS10325 () | 2108837..2109580 | - | 744 | WP_126123774.1 | C40 family peptidase | - |
| CXX10_RS10330 () | 2109586..2110284 | - | 699 | WP_001152639.1 | phage minor tail protein L | - |
| CXX10_RS10335 () | 2110284..2110613 | - | 330 | WP_000847379.1 | phage tail protein | - |
| CXX10_RS10340 () | 2110610..2113189 | - | 2580 | WP_000840312.1 | phage tail tape measure protein | - |
| CXX10_RS10345 () | 2113182..2113616 | - | 435 | WP_000459458.1 | phage tail assembly protein T | - |
| CXX10_RS10350 () | 2113598..2114020 | - | 423 | WP_000479153.1 | phage minor tail protein G | - |
| CXX10_RS10355 () | 2114036..2114776 | - | 741 | WP_001711723.1 | phage tail protein | - |
| CXX10_RS10360 () | 2114784..2115179 | - | 396 | WP_000683119.1 | phage minor tail U family protein | - |
| CXX10_RS10365 () | 2115176..2115754 | - | 579 | WP_000985130.1 | phage tail protein | - |
| CXX10_RS10370 () | 2115766..2116119 | - | 354 | WP_000752994.1 | head-tail joining protein | - |
| CXX10_RS10375 () | 2116131..2116517 | - | 387 | WP_000158859.1 | DNA-packaging protein FI | - |
| CXX10_RS10380 () | 2116559..2117584 | - | 1026 | WP_000063254.1 | major capsid protein | - |
| CXX10_RS10385 () | 2117640..2117972 | - | 333 | WP_001299443.1 | head decoration protein | - |
| CXX10_RS10390 () | 2117982..2119301 | - | 1320 | WP_000123336.1 | S49 family peptidase | - |
| CXX10_RS10395 () | 2119282..2120883 | - | 1602 | WP_001355924.1 | phage portal protein | - |
| CXX10_RS10400 () | 2120880..2121086 | - | 207 | WP_000198149.1 | gpW family protein | - |
| CXX10_RS10405 () | 2121083..2121697 | - | 615 | WP_071597534.1 | phage terminase large subunit family protein | - |
| CXX10_RS10410 () | 2121764..2122441 | + | 678 | WP_001711999.1 | IS66 family transposase ISCro1 | Transposase |
| CXX10_RS10415 () | 2122441..2122788 | + | 348 | WP_000624622.1 | IS66 family transposase ISCro1 | Transposase |
| CXX10_RS10420 () | 2122808..2124379 | + | 1572 | WP_000381395.1 | IS66 family transposase ISCro1 | Transposase |
| CXX10_RS10425 () | 2124300..2125715 | - | 1416 | WP_095908821.1 | phage terminase large subunit family protein | - |
| CXX10_RS10430 () | 2125690..2126235 | - | 546 | WP_000453576.1 | DNA-packaging protein | - |
| CXX10_RS10435 () | 2126624..2126818 | + | 195 | WP_001415975.1 | YlcI/YnfO family protein | - |
| CXX10_RS10440 () | 2127179..2127472 | + | 294 | WP_000738421.1 | increased serum survival lipoprotein Iss | - |
| CXX10_RS26130 () | 2127644..2127799 | - | 156 | WP_001138277.1 | hypothetical protein | - |
| CXX10_RS10445 () | 2127828..2127941 | - | 114 | WP_001305859.1 | hypothetical protein | - |
| CXX10_RS10450 () | 2128161..2128706 | - | 546 | WP_000836754.1 | glycoside hydrolase family 108 protein | - |
| CXX10_RS10455 () | 2128708..2128986 | - | 279 | WP_001398933.1 | phage holin family protein | - |
| CXX10_RS10460 () | 2128976..2129368 | - | 393 | WP_001398932.1 | phage holin | - |
| CXX10_RS10480 () | 2130438..2131484 | - | 1047 | WP_000799652.1 | site-specific DNA-methyltransferase | - |
| CXX10_RS10485 () | 2131634..2131828 | - | 195 | WP_001355891.1 | hypothetical protein | - |
| CXX10_RS10490 () | 2132085..2133368 | + | 1284 | WP_000123148.1 | hypothetical protein | - |
| CXX10_RS10495 () | 2133575..2133928 | - | 354 | WP_000532207.1 | antitermination protein Q | - |
| CXX10_RS10500 () | 2133918..2134289 | - | 372 | WP_001217451.1 | RusA family crossover junction endodeoxyribonuclease | - |
| CXX10_RS10505 () | 2134302..2135348 | - | 1047 | WP_126123775.1 | DUF968 domain-containing protein | - |
| CXX10_RS10510 () | 2135350..2135628 | - | 279 | WP_001410105.1 | hypothetical protein | - |
| CXX10_RS10515 () | 2135795..2135950 | - | 156 | WP_000813254.1 | type I toxin-antitoxin system toxin HokD | Toxin Detail |
| - () | 2135962..2136020 | + | 59 | - | - | Antitoxin Detail |
| CXX10_RS10530 () | 2136964..2137794 | + | 831 | WP_001399639.1 | Iron-sulfur cluster carrier protein | VF |
| CXX10_RS10535 () | 2137791..2138297 | + | 507 | WP_000130123.1 | hypothetical protein | - |
| CXX10_RS10540 () | 2138300..2138995 | + | 696 | WP_032190252.1 | hypothetical protein | - |
| CXX10_RS10545 () | 2139278..2140555 | - | 1278 | WP_000625667.1 | DUF2254 domain-containing protein | - |
| CXX10_RS10555 () | 2140619..2142616 | - | 1998 | WP_005032116.1 | choline BCCT transporter BetT | - |
| CXX10_RS10565 () | 2142870..2143892 | + | 1023 | WP_001356151.1 | IS21 family transposase IS100kyp | Transposase |
| CXX10_RS10570 () | 2143889..2144671 | + | 783 | WP_001317493.1 | IS21 family transposase IS100kyp | Transposase |
| CXX10_RS10575 () | 2144913..2146075 | + | 1163 | WP_085947771.1 | IS3 family transposase IS3 | Transposase |
| CXX10_RS10580 () | 2146177..2146599 | - | 423 | WP_001151151.1 | DUF977 family protein | - |
| CXX10_RS10585 () | 2146640..2147710 | - | 1071 | WP_001262391.1 | DNA-binding protein | - |
| CXX10_RS10590 () | 2147782..2148207 | - | 426 | WP_000693850.1 | Rha family transcriptional regulator | - |
| CXX10_RS10595 () | 2148204..2148419 | - | 216 | WP_000471549.1 | transcriptional regulator | - |
| CXX10_RS10600 () | 2148469..2149185 | + | 717 | WP_000103684.1 | helix-turn-helix domain-containing protein | - |
| CXX10_RS10605 () | 2149458..2149613 | + | 156 | WP_000379589.1 | DUF1391 family protein | - |
| CXX10_RS10610 () | 2149773..2149991 | + | 219 | WP_001171930.1 | hypothetical protein | - |
| CXX10_RS10620 () | 2150559..2150747 | + | 189 | WP_000449194.1 | cell division inhibition protein DicB | - |
| CXX10_RS10625 () | 2150744..2150947 | + | 204 | WP_001090551.1 | DUF1482 family protein | - |
| CXX10_RS10630 () | 2151027..2153507 | + | 2481 | WP_000048591.1 | exonuclease | - |
| CXX10_RS10635 () | 2153577..2153828 | + | 252 | WP_000005552.1 | excisionase family protein | - |
| CXX10_RS10640 () | 2153848..2155143 | + | 1296 | WP_001355842.1 | Tyrosine recombinase XerD ; Integrase | Integrase |
| CXX10_RS10650 () | 2155331..2156350 | - | 1020 | WP_000836079.1 | Zn-dependent oxidoreductase | - |
| CXX10_RS10655 () | 2156362..2157576 | - | 1215 | WP_001295394.1 | starvation-sensing protein RspA | - |
| CXX10_RS10660 () | 2157782..2158108 | - | 327 | WP_000598292.1 | YnfA family protein | - |
| CXX10_RS10665 () | 2158243..2158584 | + | 342 | WP_000705214.1 | DUF1283 family protein | - |
| CXX10_RS10670 () | 2158619..2159179 | + | 561 | WP_001138581.1 | spermidine N1-acetyltransferase | - |
| CXX10_RS10675 () | 2159182..2159892 | - | 711 | WP_001321287.1 | YnfC family lipoprotein | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|