MGE detailed information
MGE type: Prophage MGE length: 59249 bp
Accession: NZ_CP025862 Location: 1585110..1644358 Organism: Escherichia coli strain 504237 Replicon: chromosome
Accession: NZ_CP025862 Location: 1585110..1644358 Organism: Escherichia coli strain 504237 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| CXX10_RS07655 () | 1582583..1583656 | - | 1074 | WP_000810250.1 | acyltransferase family protein | - |
| CXX10_RS07660 () | 1583918..1585117 | + | 1200 | WP_000284709.1 | lipoprotein-releasing ABC transporter permease subunit LolC | - |
| CXX10_RS07665 () | 1585110..1585811 | + | 702 | WP_001033694.1 | Vitamin B12 import ATP-binding protein BtuD | VF |
| CXX10_RS07670 () | 1585811..1587055 | + | 1245 | WP_001251348.1 | lipoprotein-releasing ABC transporter permease subunit LolE | - |
| CXX10_RS07675 () | 1587084..1587995 | + | 912 | WP_000291270.1 | N-acetylglucosamine kinase | - |
| CXX10_RS07680 () | 1588011..1588832 | + | 822 | WP_000952736.1 | NAD-dependent protein deacylase | - |
| CXX10_RS07685 () | 1588971..1589759 | - | 789 | WP_000713472.1 | TPM domain-containing protein | - |
| CXX10_RS07690 () | 1589756..1590217 | - | 462 | WP_001341497.1 | DUF3592 domain-containing protein | - |
| CXX10_RS07695 () | 1590275..1591321 | - | 1047 | WP_000759318.1 | spermidine/putrescine ABC transporter substrate-binding protein PotD | - |
| CXX10_RS07700 () | 1591318..1592112 | - | 795 | WP_000580316.1 | spermidine/putrescine ABC transporter permease PotC | - |
| CXX10_RS07705 () | 1592279..1593397 | - | 1119 | WP_001403676.1 | hypothetical protein ; Integrase | Integrase |
| CXX10_RS07710 () | 1593366..1593635 | - | 270 | WP_000003742.1 | excisionase | - |
| CXX10_RS07715 () | 1593697..1596168 | - | 2472 | WP_001398899.1 | exonuclease | - |
| CXX10_RS07720 () | 1596248..1596451 | - | 204 | WP_001090252.1 | DUF1482 family protein | - |
| CXX10_RS07725 () | 1596448..1596636 | - | 189 | WP_000449198.1 | hypothetical protein | - |
| CXX10_RS07735 () | 1597203..1597436 | + | 234 | WP_000920491.1 | hypothetical protein | - |
| CXX10_RS07740 () | 1597414..1597821 | - | 408 | WP_000394517.1 | hypothetical protein | - |
| CXX10_RS07745 () | 1597844..1598062 | - | 219 | WP_001171921.1 | hypothetical protein | - |
| CXX10_RS07750 () | 1598222..1598377 | - | 156 | WP_000379575.1 | DUF1391 family protein | - |
| CXX10_RS07755 () | 1598567..1598974 | - | 408 | WP_001003379.1 | helix-turn-helix domain-containing protein | - |
| CXX10_RS07760 () | 1599052..1599279 | + | 228 | WP_000476985.1 | transcriptional regulator | - |
| CXX10_RS07765 () | 1599263..1599784 | + | 522 | WP_000705382.1 | hypothetical protein | - |
| CXX10_RS07770 () | 1599765..1600730 | + | 966 | WP_000054517.1 | hypothetical protein | - |
| CXX10_RS07775 () | 1600736..1601482 | + | 747 | WP_000788772.1 | ATP-binding protein | - |
| CXX10_RS07780 () | 1601504..1602265 | + | 762 | WP_000450703.1 | DUF1627 domain-containing protein | - |
| CXX10_RS07785 () | 1602298..1602579 | + | 282 | WP_001509842.1 | hypothetical protein | - |
| CXX10_RS07790 () | 1602582..1602994 | + | 413 | Protein_1494 | DUF4406 domain-containing protein | - |
| CXX10_RS07795 () | 1603098..1603520 | + | 423 | WP_000160146.1 | hypothetical protein | - |
| - () | 1603742..1603800 | - | 59 | - | - | Antitoxin Detail |
| CXX10_RS07800 () | 1603812..1603967 | + | 156 | WP_000813254.1 | type I toxin-antitoxin system toxin HokD | Toxin Detail |
| CXX10_RS07805 () | 1604183..1604362 | + | 180 | WP_001277775.1 | hypothetical protein | - |
| CXX10_RS07810 () | 1604381..1604866 | + | 486 | WP_000818165.1 | type II toxin-antitoxin system death-on-curing family toxin | - |
| CXX10_RS07815 () | 1605067..1605327 | + | 261 | WP_000701918.1 | hypothetical protein | - |
| CXX10_RS07820 () | 1605394..1605672 | + | 279 | WP_023607105.1 | hypothetical protein | - |
| CXX10_RS07825 () | 1605674..1606729 | + | 1056 | WP_001502278.1 | DUF968 domain-containing protein | - |
| CXX10_RS07830 () | 1606730..1607095 | + | 366 | WP_001297842.1 | RusA family crossover junction endodeoxyribonuclease | - |
| CXX10_RS07835 () | 1607104..1607646 | + | 543 | WP_001398904.1 | DUF1133 family protein | - |
| CXX10_RS07840 () | 1607959..1608156 | + | 198 | WP_000917767.1 | hypothetical protein | - |
| CXX10_RS07845 () | 1608307..1609356 | + | 1050 | WP_000611206.1 | site-specific DNA-methyltransferase | - |
| CXX10_RS07865 () | 1609848..1610240 | + | 393 | WP_001297664.1 | holin | - |
| CXX10_RS07870 () | 1610230..1610505 | + | 276 | WP_000950576.1 | phage holin family protein | - |
| CXX10_RS07875 () | 1610508..1610885 | + | 378 | WP_001117825.1 | M15 family metallopeptidase | - |
| CXX10_RS07880 () | 1611018..1611131 | + | 114 | WP_001297666.1 | hypothetical protein | - |
| CXX10_RS26100 () | 1611160..1611315 | + | 156 | WP_001138287.1 | hypothetical protein | - |
| CXX10_RS07885 () | 1611490..1611882 | + | 393 | WP_000415817.1 | hypothetical protein | - |
| CXX10_RS07895 () | 1612463..1613002 | + | 540 | WP_000421824.1 | DUF1441 family protein | - |
| CXX10_RS07900 () | 1613011..1613811 | + | 801 | Protein_1513 | phage terminase large subunit family protein | - |
| CXX10_RS07905 () | 1613865..1615436 | - | 1572 | WP_001743889.1 | IS66 family transposase ISCro1 | Transposase |
| CXX10_RS07910 () | 1615456..1615803 | - | 348 | WP_000624622.1 | IS66 family transposase ISCro1 | Transposase |
| CXX10_RS07915 () | 1615803..1616480 | - | 678 | WP_001339397.1 | IS66 family transposase ISCro1 | Transposase |
| CXX10_RS07920 () | 1616517..1617817 | + | 1301 | Protein_1517 | phage terminase large subunit family protein | - |
| CXX10_RS07925 () | 1617814..1618026 | + | 213 | WP_001072975.1 | hypothetical protein | - |
| CXX10_RS07930 () | 1618026..1619501 | + | 1476 | WP_001460789.1 | phage portal protein | - |
| CXX10_RS07935 () | 1619479..1621506 | + | 2028 | WP_126123766.1 | ATP-dependent Clp protease proteolytic subunit | VF |
| CXX10_RS07940 () | 1621593..1621916 | + | 324 | WP_001097045.1 | DUF2190 family protein | - |
| CXX10_RS07945 () | 1621909..1622184 | + | 276 | WP_001283153.1 | DNA breaking-rejoining protein | - |
| CXX10_RS07950 () | 1622196..1622786 | + | 591 | WP_001398416.1 | phage tail protein | - |
| CXX10_RS07955 () | 1622783..1623184 | + | 402 | WP_001464346.1 | phage minor tail U family protein | - |
| CXX10_RS07960 () | 1623195..1623938 | + | 744 | WP_000211121.1 | phage tail protein | - |
| CXX10_RS07965 () | 1623999..1624385 | + | 387 | WP_001298500.1 | phage minor tail protein G | - |
| CXX10_RS07970 () | 1624394..1624723 | + | 330 | WP_001161009.1 | phage tail assembly protein T | - |
| CXX10_RS07975 () | 1624695..1627751 | + | 3057 | WP_001460656.1 | phage tail tape measure protein | - |
| CXX10_RS07980 () | 1627751..1628080 | + | 330 | WP_000447253.1 | phage tail protein | - |
| CXX10_RS07985 () | 1628090..1628788 | + | 699 | WP_001152385.1 | phage minor tail protein L | - |
| CXX10_RS07990 () | 1628793..1629536 | + | 744 | WP_001462126.1 | C40 family peptidase | - |
| CXX10_RS07995 () | 1629434..1630081 | + | 648 | WP_000741576.1 | tail assembly protein | - |
| CXX10_RS08000 () | 1630142..1633621 | + | 3480 | WP_095908817.1 | host specificity protein J | - |
| CXX10_RS08005 () | 1633689..1634288 | + | 600 | WP_112915612.1 | hypothetical protein | VF |
| CXX10_RS08010 () | 1634353..1637766 | + | 3414 | WP_126123767.1 | prophage tail fiber N-terminal domain-containing protein | - |
| CXX10_RS08015 () | 1637766..1638350 | + | 585 | WP_000885577.1 | tail fiber assembly protein | - |
| CXX10_RS08025 () | 1638405..1639073 | - | 669 | WP_126123768.1 | class I SAM-dependent methyltransferase | - |
| CXX10_RS08030 () | 1639130..1639396 | + | 267 | WP_000937496.1 | tail fiber assembly protein | - |
| CXX10_RS08035 () | 1639629..1640492 | - | 864 | WP_000799406.1 | spermidine/putrescine ABC transporter permease PotB | - |
| CXX10_RS08040 () | 1640476..1641612 | - | 1137 | WP_000531601.1 | Vitamin B12 import ATP-binding protein BtuD | VF |
| CXX10_RS08045 () | 1641862..1643091 | + | 1230 | WP_000359463.1 | peptidase T | - |
| CXX10_RS08050 () | 1643237..1644358 | - | 1122 | WP_001295435.1 | [50S ribosomal protein L16]-arginine 3-hydroxylase | - |
| CXX10_RS08055 () | 1644434..1645894 | - | 1461 | WP_000735412.1 | two-component system sensor histidine kinase PhoQ | - |
| CXX10_RS08060 () | 1645894..1646565 | - | 672 | WP_001265481.1 | two-component system response regulator PhoP | - |
| CXX10_RS08065 () | 1646733..1648103 | - | 1371 | WP_000423729.1 | adenylosuccinate lyase | - |
| CXX10_RS08070 () | 1648107..1648748 | - | 642 | WP_001297479.1 | high frequency lysogenization protein HflD | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|