MGE detailed information

MGE type: Conjugative plasmid        MGE length: 155850 bp
Accession: NZ_CP025861        Location: 1..155850         Organism: Escherichia coli strain 504239       Replicon: plasmid p504239_155


Gene structure


The 5 kb flanking regions of this MGE are displayed.

Locus tag Coordinates Strand Size (bp) Protein ID Product Description
CXV92_RS26510 () 2..1640 + 1639 Protein_1 CFA/I pilus usher protein CfaC -
CXV92_RS25125 () 1698..2774 + 1077 Protein_2 CFA/I pilus tip adhesin CfaE -
CXV92_RS25130 () 2937..3731 - 795 Protein_3 CFA/I fimbrial subunit D VF
CXV92_RS25135 () 3980..4113 + 134 Protein_4 ANR family transcriptional regulator -
CXV92_RS25140 () 5288..5728 - 441 Protein_5 IS66 family transposase ISSfl3 Transposase
CXV92_RS25145 () 5831..6255 - 425 Protein_6 PAS domain-containing protein -
CXV92_RS25150 () 6449..6832 - 384 WP_001151556.1 relaxosome protein TraM -
CXV92_RS25155 () 7117..7765 + 649 Protein_8 hypothetical protein VF
CXV92_RS25160 () 8062..8882 - 821 Protein_9 DUF932 domain-containing protein -
CXV92_RS25165 () 8992..9288 - 297 WP_001272252.1 hypothetical protein -
CXV92_RS25170 () 9542..10018 + 477 Protein_11 IS110 family transposase IS1663 Transposase
CXV92_RS25180 () 11301..11882 + 582 Protein_13 IS110 family transposase IS1663 Transposase
CXV92_RS26515 () 12323..12574 + 252 Protein_14 hypothetical protein -
CXV92_RS25200 () 12576..12923 - 348 WP_000855087.1 IS66 family transposase ISCro1 Transposase
CXV92_RS25205 () 12955..14526 - 1572 WP_000381449.1 IS66 family transposase IS679 Transposase
CXV92_RS25210 () 14546..14893 - 348 WP_000624622.1 IS66 family transposase ISCro1 Transposase
CXV92_RS25215 () 14893..15543 - 651 WP_000993921.1 IS66 family transposase IS679 Transposase
CXV92_RS25220 () 15625..15750 - 126 WP_001488068.1 DUF5431 family protein -
- () 15757..15943 - 187 NuclAT_2 - -
- () 15757..15943 - 187 NuclAT_2 - -
- () 15757..15943 - 187 NuclAT_2 - -
- () 15757..15943 - 187 NuclAT_2 - -
CXV92_RS25230 () 15900..16214 - 315 WP_000872086.1 hypothetical protein -
CXV92_RS25235 () 16211..16930 - 720 WP_001379993.1 plasmid SOS inhibition protein A -
CXV92_RS25240 () 16927..17361 - 435 WP_000845954.1 conjugation system SOS inhibitor PsiB -
CXV92_RS25245 () 17416..19376 - 1961 Protein_23 ParB/RepB/Spo0J family partition protein -
CXV92_RS25250 () 19414..20627 + 1214 WP_139371347.1 IS3 family transposase IS629 Transposase
CXV92_RS25260 () 20669..21037 + 369 Protein_25 DUF4113 domain-containing protein -
CXV92_RS25265 () 21042..21434 - 393 WP_000340829.1 plasmid partitioning/stability family protein -
CXV92_RS25270 () 21439..22410 - 972 WP_001103691.1 hypothetical protein -
CXV92_RS25275 () 22639..23283 + 645 WP_000633913.1 AAA family ATPase -
CXV92_RS25280 () 23277..23552 + 276 WP_000239529.1 hypothetical protein -
CXV92_RS25285 () 23690..24481 - 792 WP_000016495.1 site-specific integrase -
CXV92_RS25290 () 24478..25167 - 690 WP_000796232.1 hypothetical protein -
CXV92_RS25295 () 25160..25444 - 285 WP_001331078.1 hypothetical protein -
CXV92_RS25300 () 26213..27208 + 996 WP_000246636.1 hypothetical protein -
CXV92_RS25305 () 27212..28144 + 933 WP_000991832.1 hypothetical protein -
CXV92_RS25310 () 28596..29809 + 1214 WP_139371347.1 IS3 family transposase IS629 Transposase
CXV92_RS25320 () 30390..31085 + 696 WP_072147603.1 DNA-binding protein -
CXV92_RS25325 () 31082..31702 + 621 WP_001307044.1 hypothetical protein -
CXV92_RS25330 () 31699..32487 + 789 WP_000708304.1 DUF2971 domain-containing protein -
CXV92_RS25335 () 32523..33263 + 741 WP_000933099.1 abortive infection family protein -
CXV92_RS25340 () 33552..34364 - 813 WP_001380078.1 hypothetical protein -
CXV92_RS25350 () 35150..36127 + 978 WP_000361612.1 RepB family plasmid replication initiator protein -
CXV92_RS25355 () 36406..37146 - 741 WP_001066941.1 tyrosine-type recombinase/integrase -
CXV92_RS25360 () 37267..37395 - 129 WP_032174847.1 hypothetical protein -
CXV92_RS25370 () 38339..38644 + 306 WP_000336590.1 Major pilu subunit operon regulatory protein PapB VF
CXV92_RS25375 () 38896..39792 + 897 WP_000017442.1 transcriptional regulator HilD -
CXV92_RS25380 () 39806..40249 + 444 WP_001220546.1 hypothetical protein VF
CXV92_RS25385 () 40548..41258 + 711 WP_000954086.1 Toxin coregulated pilin VF
CXV92_RS25390 () 41320..42891 + 1572 WP_000783967.1 prepilin-type N-terminal cleavage/methylation domain-containing protein -
CXV92_RS25395 () 42910..43323 + 414 WP_001201934.1 TcpQ domain-containing protein -
CXV92_RS25400 () 43341..44798 + 1458 WP_000768354.1 hypothetical protein -
CXV92_RS25405 () 44801..45361 + 561 WP_001047585.1 hypothetical protein -
CXV92_RS25410 () 45363..46190 + 828 WP_001054274.1 hypothetical protein -
CXV92_RS25415 () 46178..46663 + 486 WP_000336151.1 hypothetical protein -
CXV92_RS25420 () 46861..48195 + 1335 WP_001380305.1 Toxin coregulated pilus biosynthesis protein T VF
CXV92_RS25425 () 48179..49204 + 1026 WP_000714367.1 Toxin coregulated pilus biosynthesis protein E VF
CXV92_RS25430 () 49219..50340 + 1122 WP_000857355.1 hypothetical protein -
CXV92_RS25435 () 50343..51197 + 855 WP_000289148.1 Type 4 prepilin-like proteins leader peptide-processing enzyme VF
CXV92_RS25440 () 51414..51986 - 573 WP_000723074.1 hypothetical protein -
CXV92_RS25445 () 52312..52722 - 411 Protein_59 Tn3 family transposase ISEc63 Transposase
CXV92_RS26520 () 52915..53133 + 219 WP_077628640.1 hypothetical protein -
CXV92_RS25455 () 53133..53717 + 585 WP_000194583.1 hypothetical protein -
CXV92_RS25460 () 53982..55538 + 1557 WP_000818361.1 AAA family ATPase -
CXV92_RS25465 () 55733..56350 + 618 WP_000521602.1 hypothetical protein -
CXV92_RS25470 () 56409..56864 - 456 WP_001209678.1 hypothetical protein -
CXV92_RS25475 () 56916..57119 - 204 Protein_65 hypothetical protein -
CXV92_RS25480 () 57211..58439 + 1229 WP_164545842.1 IS3 family transposase IS2 Transposase
CXV92_RS25485 () 58450..58560 - 111 Protein_67 type IV conjugative transfer system protein TraE -
CXV92_RS25490 () 58582..58893 - 312 WP_000012116.1 type IV conjugative transfer system protein TraL -
CXV92_RS25495 () 58908..59273 - 366 WP_000994783.1 type IV conjugative transfer system pilin TraA -
CXV92_RS25500 () 59305..59700 - 396 WP_001309237.1 conjugal transfer relaxosome protein TraY -
CXV92_RS25505 () 59799..60488 - 690 WP_000283390.1 conjugal transfer transcriptional regulator TraJ -
CXV92_RS25510 () 60675..61058 - 384 WP_001151524.1 relaxosome protein TraM -
CXV92_RS25515 () 61380..61982 + 603 WP_000243715.1 hypothetical protein VF
CXV92_RS25520 () 62279..63100 - 822 WP_001234441.1 DUF945 domain-containing protein -
CXV92_RS25525 () 63211..63507 - 297 WP_001272251.1 hypothetical protein -
CXV92_RS26370 () 63847..64138 + 292 Protein_76 hypothetical protein -
CXV92_RS26525 () 64145..64450 - 306 WP_205755829.1 hypothetical protein -
CXV92_RS25545 () 64549..64791 - 243 WP_000540588.1 hypothetical protein -
CXV92_RS25550 () 64850..65173 - 324 WP_000533253.1 hypothetical protein -
CXV92_RS26530 () 65469..65847 + 379 Protein_80 hypothetical protein -
CXV92_RS25570 () 66085..66246 - 162 WP_000775237.1 type I toxin-antitoxin system Hok family toxin -
- () 66292..66497 - 206 NuclAT_0 - -
- () 66292..66497 - 206 NuclAT_0 - -
- () 66292..66497 - 206 NuclAT_0 - -
- () 66292..66497 - 206 NuclAT_0 - -
CXV92_RS25580 () 66454..66768 - 315 WP_000872086.1 hypothetical protein -
CXV92_RS25585 () 66765..67484 - 720 WP_001276221.1 plasmid SOS inhibition protein A -
CXV92_RS25590 () 67481..67915 - 435 WP_000845955.1 conjugation system SOS inhibitor PsiB -
CXV92_RS25595 () 67970..69934 - 1965 WP_000117104.1 ParB/RepB/Spo0J family partition protein -
CXV92_RS25600 () 69995..70228 - 234 WP_000006028.1 DUF905 family protein -
CXV92_RS25605 () 70286..70813 - 528 WP_000290853.1 single-stranded DNA-binding protein -
CXV92_RS25620 () 71158..71382 + 225 WP_001380475.1 hypothetical protein -
CXV92_RS25635 () 71667..72230 - 564 WP_001485292.1 class I SAM-dependent methyltransferase -
CXV92_RS25640 () 72277..73638 - 1362 WP_000170688.1 DUF3560 domain-containing protein -
CXV92_RS25645 () 73690..73920 - 231 WP_000218642.1 hypothetical protein -
CXV92_RS26380 () 74436..74684 + 249 WP_071556315.1 hypothetical protein -
CXV92_RS25655 () 75154..75558 - 405 WP_001175008.1 IS200-IS605 family transposase ISSen6 Transposase
CXV92_RS25660 () 75617..76843 + 1227 WP_001484257.1 IS200-IS605 family transposase ISSen6 Transposase
CXV92_RS25665 () 76963..77385 - 423 WP_000271769.1 DUF1380 family protein -
CXV92_RS25670 () 77432..77734 - 303 WP_001671341.1 antirestriction protein -
CXV92_RS26535 () 78273..79043 - 771 WP_001006244.1 hypothetical protein -
CXV92_RS25685 () 79088..79522 - 435 WP_000274496.1 DUF1380 family protein -
CXV92_RS25690 () 79536..79757 - 222 WP_001104873.1 hypothetical protein -
CXV92_RS25695 () 79758..80441 - 684 WP_000086118.1 DNA methylase -
CXV92_RS25700 () 80517..80829 - 313 Protein_101 hypothetical protein -
CXV92_RS25705 () 80826..81728 - 903 WP_077628950.1 DUF1281 domain-containing protein -
CXV92_RS25720 () 82152..82574 - 423 WP_000774834.1 plasmid partitioning/stability family protein -
CXV92_RS25725 () 82577..83557 - 981 WP_001218107.1 plasmid segregation protein ParM -
CXV92_RS25730 () 83895..84230 + 336 WP_001340323.1 hypothetical protein -
CXV92_RS25740 () 84491..85195 - 705 WP_001067855.1 IS6 family transposase IS26 Transposase
CXV92_RS25745 () 85378..85937 - 560 Protein_107 IS1 family transposase -
CXV92_RS25750 () 85966..87276 - 1311 WP_001262765.1 DUF262 domain-containing protein -
CXV92_RS25755 () 87561..87962 - 402 WP_001398199.1 type II toxin-antitoxin system toxin endoribonuclease PemK -
CXV92_RS25760 () 87895..88152 - 258 WP_000557619.1 type II toxin-antitoxin system antitoxin PemI -
CXV92_RS25765 () 88245..88898 - 654 WP_000616807.1 CPBP family intramembrane metalloprotease -
CXV92_RS25775 () 89836..90693 - 858 WP_000131013.1 incFII family plasmid replication initiator RepA -
CXV92_RS25780 () 90686..90760 - 75 WP_001375168.1 RepA leader peptide Tap -
CXV92_RS25790 () 90994..91251 - 258 WP_000083834.1 replication regulatory protein RepA -
CXV92_RS25795 () 91491..92081 - 591 WP_000766798.1 DUF2726 domain-containing protein -
CXV92_RS25800 () 92119..92328 - 210 WP_001302200.1 hemolysin expression modulator Hha -
CXV92_RS25805 () 92374..92655 - 282 Protein_117 thermonuclease family protein -
CXV92_RS25815 () 92709..93386 + 678 WP_001339397.1 IS66 family transposase ISCro1 Transposase
CXV92_RS25820 () 93386..93733 + 348 WP_000624622.1 IS66 family transposase ISCro1 Transposase
CXV92_RS25825 () 93753..95324 + 1572 WP_001748001.1 IS66 family transposase ISCro1 Transposase
CXV92_RS25830 () 95356..97388 + 2033 Protein_121 type IV conjugative transfer system coupling protein TraD -
CXV92_RS25835 () 97397..97795 - 399 WP_000911313.1 tRNA(fMet)-specific endonuclease VapC Toxin Detail
CXV92_RS25840 () 97795..98022 - 228 WP_000450520.1 toxin-antitoxin system antitoxin VapB Antitoxin Detail
CXV92_RS25845 () 98104..103374 + 5271 WP_000987016.1 Multifunctional conjugation protein TraI Relaxase
CXV92_RS25850 () 103394..104140 + 747 WP_000205749.1 conjugal transfer pilus acetylase TraX -
CXV92_RS25855 () 104199..105059 + 861 WP_000704515.1 alpha/beta hydrolase -
CXV92_RS25860 () 105162..105722 + 561 WP_000840466.1 fertility inhibition protein FinO -
CXV92_RS25865 () 105855..106067 + 213 WP_001490517.1 ANR family transcriptional regulator -
CXV92_RS25870 () 106312..106500 + 189 Protein_129 endonuclease -
CXV92_RS25875 () 106530..108101 - 1572 WP_001748001.1 IS66 family transposase ISCro1 Transposase
CXV92_RS25880 () 108121..108468 - 348 WP_000624622.1 IS66 family transposase ISCro1 Transposase
CXV92_RS25885 () 108468..109145 - 678 WP_001339397.1 IS66 family transposase ISCro1 Transposase
CXV92_RS25900 () 109578..110309 - 732 WP_000850422.1 complement resistance protein TraT -
CXV92_RS25905 () 110323..110832 - 510 WP_000628096.1 conjugal transfer entry exclusion protein TraS -
CXV92_RS25910 () 110829..113654 - 2826 WP_001007019.1 conjugal transfer mating pair stabilization protein TraG -
CXV92_RS25915 () 113651..115024 - 1374 WP_000944320.1 conjugal transfer protein TraH -
CXV92_RS25925 () 115390..115731 - 342 WP_001442101.1 P-type conjugative transfer protein TrbJ -
CXV92_RS25930 () 115661..115939 - 279 Protein_138 type-F conjugative transfer system pilin assembly thiol-disulfide isomerase TrbB -
CXV92_RS25935 () 115933..116892 - 960 WP_000830182.1 conjugal transfer pilus assembly protein TraU -
CXV92_RS25940 () 116889..117521 - 633 WP_001203720.1 type-F conjugative transfer system protein TraW -
CXV92_RS25945 () 117518..117904 - 387 WP_000099690.1 type-F conjugative transfer system protein TrbI -
CXV92_RS25950 () 117901..119007 - 1107 WP_000146671.1 hypothetical protein -
CXV92_RS25955 () 119007..119711 - 705 WP_072095570.1 type-F conjugative transfer system secretin TraK -
CXV92_RS25960 () 119722..120288 - 567 WP_000399792.1 type IV conjugative transfer system protein TraE -
CXV92_RS25965 () 120310..120621 - 312 WP_000012106.1 type IV conjugative transfer system protein TraL -
CXV92_RS25970 () 120636..121001 - 366 WP_000340270.1 type IV conjugative transfer system pilin TraA -
CXV92_RS25975 () 121035..121274 - 240 WP_071608116.1 conjugal transfer relaxosome protein TraY -
CXV92_RS25980 () 121382..122029 - 648 WP_000332529.1 transcriptional regulator TraJ family protein -
CXV92_RS25985 () 122221..122604 - 384 WP_001151530.1 relaxosome protein TraM -
CXV92_RS25990 () 122880..123527 + 648 WP_000601036.1 hypothetical protein VF
CXV92_RS25995 () 123860..124645 - 786 WP_159379700.1 DUF945 domain-containing protein -
CXV92_RS26000 () 124756..125052 - 297 WP_001272251.1 hypothetical protein -
CXV92_RS26540 () 125349..125604 + 256 Protein_153 hypothetical protein -
CXV92_RS26025 () 125691..126341 + 651 WP_000993921.1 IS66 family transposase IS679 Transposase
CXV92_RS26030 () 126341..126688 + 348 WP_000624622.1 IS66 family transposase ISCro1 Transposase
CXV92_RS26035 () 126708..128279 + 1572 WP_000381449.1 IS66 family transposase IS679 Transposase
CXV92_RS26045 () 128611..128712 - 102 WP_072007806.1 Hok/Gef family protein -
CXV92_RS26050 () 128747..129094 - 348 WP_000855087.1 IS66 family transposase ISCro1 Transposase
CXV92_RS26055 () 129126..130697 - 1572 WP_000381449.1 IS66 family transposase IS679 Transposase
CXV92_RS26060 () 130717..131064 - 348 WP_000624622.1 IS66 family transposase ISCro1 Transposase
CXV92_RS26065 () 131064..131714 - 651 WP_000993921.1 IS66 family transposase IS679 Transposase
CXV92_RS26070 () 131796..131921 - 126 WP_001488068.1 DUF5431 family protein -
- () 131916..132115 - 200 NuclAT_1 - -
- () 131916..132115 - 200 NuclAT_1 - -
- () 131916..132115 - 200 NuclAT_1 - -
- () 131916..132115 - 200 NuclAT_1 - -
CXV92_RS26080 () 132072..132386 - 315 WP_000872086.1 hypothetical protein -
CXV92_RS26085 () 132383..133102 - 720 WP_001379993.1 plasmid SOS inhibition protein A -
CXV92_RS26090 () 133099..133533 - 435 WP_000845954.1 conjugation system SOS inhibitor PsiB -
CXV92_RS26095 () 133588..135549 - 1962 WP_032187061.1 ParB/RepB/Spo0J family partition protein -
CXV92_RS26100 () 135587..136800 + 1214 WP_139371347.1 IS3 family transposase IS629 Transposase
CXV92_RS26110 () 136842..137210 + 369 Protein_168 DUF4113 domain-containing protein -
CXV92_RS26115 () 137215..137607 - 393 WP_000340829.1 plasmid partitioning/stability family protein -
CXV92_RS26120 () 137612..138583 - 972 WP_001103691.1 hypothetical protein -
CXV92_RS26125 () 138812..139456 + 645 WP_000633913.1 AAA family ATPase -
CXV92_RS26130 () 139450..139725 + 276 WP_000239529.1 hypothetical protein -
CXV92_RS26135 () 139863..140654 - 792 WP_000016495.1 site-specific integrase -
CXV92_RS26140 () 140651..141340 - 690 WP_000796232.1 hypothetical protein -
CXV92_RS26145 () 141333..141617 - 285 WP_001331078.1 hypothetical protein -
CXV92_RS26150 () 142386..143381 + 996 WP_000246636.1 hypothetical protein -
CXV92_RS26155 () 143385..144317 + 933 WP_000991832.1 hypothetical protein -
CXV92_RS26160 () 144769..145982 + 1214 WP_139371347.1 IS3 family transposase IS629 Transposase
CXV92_RS26170 () 146563..147258 + 696 WP_072147603.1 DNA-binding protein -
CXV92_RS26175 () 147255..147875 + 621 WP_001307044.1 hypothetical protein -
CXV92_RS26180 () 147872..148659 + 788 Protein_181 DUF2971 domain-containing protein -
CXV92_RS26185 () 148695..149435 + 741 WP_000933099.1 abortive infection family protein -
CXV92_RS26190 () 149984..150532 - 549 WP_205755828.1 hypothetical protein -
CXV92_RS26200 () 151306..152275 + 970 Protein_184 RepB family plasmid replication initiator protein -
CXV92_RS26205 () 152558..153282 - 725 Protein_185 tyrosine-type recombinase/integrase -
CXV92_RS26210 () 153401..153519 - 119 Protein_186 transcriptional regulator -
CXV92_RS26215 () 154447..154744 + 298 Protein_187 transcriptional regulator -

Similar MGE(s)


Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.

Detail Organism MGE type Related TA Genome accession Coordinates Mash
distance