MGE detailed information
MGE type: Prophage MGE length: 49469 bp
Accession: NZ_CP025859 Location: 394585..444053 Organism: Escherichia coli strain 504239 Replicon: chromosome
Accession: NZ_CP025859 Location: 394585..444053 Organism: Escherichia coli strain 504239 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| CXV92_RS01965 () | 390610..390921 | - | 312 | WP_000722572.1 | PTS sugar transporter subunit IIB | - |
| CXV92_RS01970 () | 391120..391818 | + | 699 | WP_000577184.1 | GntR family transcriptional regulator | - |
| CXV92_RS01975 () | 391863..392762 | - | 900 | WP_000087220.1 | O-acetylserine/cysteine exporter | - |
| CXV92_RS01980 () | 392957..394144 | + | 1188 | WP_001054173.1 | efflux MFS transporter YdeE | - |
| CXV92_RS01985 () | 394271..394366 | + | 96 | WP_000901367.1 | protein MgtS | - |
| CXV92_RS26565 () | 394366..394470 | + | 105 | WP_211180496.1 | protein MgtT | - |
| CXV92_RS01990 () | 394585..395472 | - | 888 | WP_000592848.1 | diguanylate cyclase DgcZ | - |
| CXV92_RS01995 () | 395727..396119 | - | 393 | WP_000671731.1 | YdeI family stress tolerance OB fold protein | - |
| CXV92_RS02000 () | 396395..396913 | + | 519 | WP_001024555.1 | 2-oxo-tetronate isomerase | - |
| CXV92_RS02005 () | 396958..399003 | - | 2046 | WP_001295662.1 | peptidyl-dipeptidase Dcp | - |
| CXV92_RS02010 () | 399140..399886 | + | 747 | WP_001324973.1 | DnaA regulatory inactivator Hda | VF |
| CXV92_RS02015 () | 399975..400661 | + | 687 | WP_000215549.1 | DNA-binding transcriptional regulator YdfH | - |
| CXV92_RS02020 () | 400838..401041 | + | 204 | WP_000214712.1 | putative selenium delivery protein YdfZ | - |
| CXV92_RS02025 () | 401077..402537 | - | 1461 | WP_000527780.1 | mannitol dehydrogenase family protein | - |
| CXV92_RS02030 () | 402626..403909 | - | 1284 | Protein_390 | MHS family MFS transporter YdfJ | - |
| CXV92_RS02040 () | 405849..405962 | + | 114 | WP_120795384.1 | hypothetical protein | - |
| CXV92_RS02045 () | 406031..406264 | + | 234 | WP_000836768.1 | cold shock protein YdfK | - |
| CXV92_RS02050 () | 406581..407171 | + | 591 | WP_000086530.1 | Tn3 family transposase TnpR_ISSba14 | Transposase |
| CXV92_RS02055 () | 407269..407391 | - | 123 | Protein_395 | tail fiber assembly protein | - |
| CXV92_RS02060 () | 407443..410727 | - | 3285 | WP_126130405.1 | prophage tail fiber N-terminal domain-containing protein | - |
| CXV92_RS02065 () | 410792..411376 | - | 585 | WP_029379692.1 | putative inner membrane transporter YedA | VF |
| CXV92_RS02070 () | 411340..411606 | - | 267 | Protein_398 | DUF1441 family protein | - |
| CXV92_RS02075 () | 411674..412351 | + | 678 | WP_001339397.1 | IS66 family transposase ISCro1 | Transposase |
| CXV92_RS02080 () | 412351..412698 | + | 348 | WP_000624622.1 | IS66 family transposase ISCro1 | Transposase |
| CXV92_RS02085 () | 412718..414289 | + | 1572 | WP_001748001.1 | IS66 family transposase ISCro1 | Transposase |
| CXV92_RS02090 () | 414866..415072 | - | 207 | WP_001031431.1 | hypothetical protein | - |
| CXV92_RS02095 () | 415373..415804 | + | 432 | WP_000035576.1 | DUF1398 domain-containing protein | - |
| CXV92_RS02100 () | 415956..416129 | - | 174 | WP_001019139.1 | addiction module toxin, GnsA/GnsB family | - |
| CXV92_RS02105 () | 416301..416456 | - | 156 | WP_001309517.1 | hypothetical protein | - |
| CXV92_RS02110 () | 416536..416601 | - | 66 | WP_120795388.1 | hypothetical protein | - |
| CXV92_RS02115 () | 416604..416792 | - | 189 | WP_071524604.1 | cold-shock protein | - |
| CXV92_RS02120 () | 416803..417015 | - | 213 | WP_000066495.1 | cold shock protein CspI | - |
| CXV92_RS02125 () | 417377..417874 | - | 498 | WP_001071769.1 | DUF2514 domain-containing protein | - |
| CXV92_RS02130 () | 417871..418404 | - | 534 | WP_001092971.1 | lysozyme | - |
| CXV92_RS02135 () | 418401..418712 | - | 312 | WP_000189916.1 | YdfR family protein | - |
| CXV92_RS02140 () | 418717..418932 | - | 216 | WP_000839590.1 | phage lysis protein EssD | - |
| CXV92_RS26570 () | 419152..419322 | + | 171 | WP_211180497.1 | putative zinc-binding protein YnfU | - |
| CXV92_RS02145 () | 419686..419901 | - | 216 | WP_000066484.1 | cold shock-like protein CspB | - |
| CXV92_RS02150 () | 420202..420414 | + | 213 | WP_000087756.1 | cold shock-like protein CspF | - |
| CXV92_RS02155 () | 420469..420558 | + | 90 | WP_120795389.1 | hypothetical protein | - |
| CXV92_RS02160 () | 420836..421588 | - | 753 | WP_001047135.1 | antitermination protein | - |
| CXV92_RS02165 () | 421602..422651 | - | 1050 | WP_001265200.1 | DUF968 domain-containing protein | - |
| CXV92_RS02170 () | 422653..422931 | - | 279 | WP_012304870.1 | hypothetical protein | - |
| CXV92_RS02175 () | 422998..423249 | - | 252 | WP_000980994.1 | hypothetical protein | - |
| CXV92_RS02180 () | 423466..423621 | - | 156 | WP_000813254.1 | type I toxin-antitoxin system toxin HokD | - |
| CXV92_RS02185 () | 423693..423980 | - | 288 | WP_000323025.1 | type II toxin-antitoxin system mRNA interferase RelE | Toxin Detail |
| CXV92_RS02190 () | 423980..424219 | - | 240 | WP_000534858.1 | type II toxin-antitoxin system antitoxin RelB | Antitoxin Detail |
| CXV92_RS02195 () | 424244..424453 | + | 210 | Protein_424 | hypothetical protein | - |
| CXV92_RS02200 () | 424452..424580 | - | 129 | Protein_425 | dicB transcriptional regulator DicC | - |
| CXV92_RS02205 () | 424664..425071 | + | 408 | WP_000448564.1 | DNA-binding transcriptional dual regulator DicA | - |
| CXV92_RS02210 () | 425238..425393 | + | 156 | WP_000379575.1 | DUF1391 family protein | - |
| CXV92_RS02215 () | 425395..425970 | + | 576 | WP_000344953.1 | hypothetical protein | - |
| CXV92_RS02220 () | 426457..426645 | + | 189 | WP_000854559.1 | cell division inhibition protein DicB | - |
| CXV92_RS02225 () | 426642..426833 | + | 192 | WP_001083278.1 | lysis protein YdfD | - |
| CXV92_RS02230 () | 426927..429398 | + | 2472 | WP_000048316.1 | exonuclease | - |
| CXV92_RS02235 () | 429471..429722 | + | 252 | WP_000005552.1 | excisionase family protein | - |
| CXV92_RS02240 () | 429757..430845 | + | 1089 | WP_000877003.1 | IS91 family transposase ISTha3 | Transposase |
| CXV92_RS02245 () | 430908..432070 | + | 1163 | WP_085947771.1 | IS3 family transposase IS3 | Transposase |
| CXV92_RS02250 () | 432098..432298 | + | 201 | Protein_435 | site-specific integrase | - |
| CXV92_RS02260 () | 432486..433505 | - | 1020 | WP_000836066.1 | Zn-dependent oxidoreductase | - |
| CXV92_RS02265 () | 433517..434731 | - | 1215 | WP_001295394.1 | starvation-sensing protein RspA | - |
| CXV92_RS02270 () | 434937..435263 | - | 327 | WP_001295395.1 | YnfA family protein | - |
| CXV92_RS02275 () | 435398..435739 | + | 342 | WP_000705197.1 | DUF1283 family protein | - |
| CXV92_RS02280 () | 435774..436334 | + | 561 | WP_001138584.1 | spermidine N1-acetyltransferase | - |
| CXV92_RS02285 () | 436337..437047 | - | 711 | WP_001321287.1 | YnfC family lipoprotein | - |
| CXV92_RS02290 () | 437155..437460 | + | 306 | WP_001295396.1 | DUF1161 domain-containing protein | - |
| CXV92_RS02295 () | 437659..440085 | + | 2427 | WP_000041563.1 | dimethyl sulfoxide reductase subunit A | - |
| CXV92_RS02300 () | 440146..442569 | + | 2424 | WP_001492046.1 | dimethyl sulfoxide reductase subunit A | - |
| CXV92_RS02305 () | 442580..443197 | + | 618 | WP_000213028.1 | dimethylsulfoxide reductase subunit B | - |
| CXV92_RS02310 () | 443199..444053 | + | 855 | WP_000526505.1 | dimethyl sulfoxide reductase anchor subunit | - |
| CXV92_RS02315 () | 444096..444710 | + | 615 | WP_000148710.1 | Tat proofreading chaperone DmsD | - |
| CXV92_RS02320 () | 444869..446161 | + | 1293 | WP_071592663.1 | voltage-gated ClC-type chloride channel ClcB | - |
| CXV92_RS02325 () | 446114..446809 | - | 696 | WP_000919231.1 | dethiobiotin synthase | - |
| CXV92_RS02330 () | 446934..448154 | - | 1221 | WP_000225276.1 | DNA-binding transcriptional repressor Mlc | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|