MGE detailed information
MGE type: Prophage MGE length: 97295 bp
Accession: NZ_CP025859 Location: 3921461..4018755 Organism: Escherichia coli strain 504239 Replicon: chromosome
Accession: NZ_CP025859 Location: 3921461..4018755 Organism: Escherichia coli strain 504239 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| CXV92_RS19225 () | 3917331..3917744 | - | 414 | WP_000611746.1 | type VI secretion system baseplate subunit TssE | - |
| CXV92_RS19230 () | 3917751..3919226 | - | 1476 | WP_001488417.1 | type VI secretion system contractile sheath large subunit | - |
| CXV92_RS19235 () | 3919277..3919501 | - | 225 | WP_000123970.1 | hypothetical protein | - |
| CXV92_RS19240 () | 3919536..3920036 | - | 501 | WP_000037398.1 | type VI secretion system contractile sheath small subunit | - |
| CXV92_RS19245 () | 3920733..3921251 | + | 519 | WP_001142958.1 | Hcp family type VI secretion system effector | - |
| CXV92_RS19250 () | 3921461..3923602 | + | 2142 | WP_000103115.1 | hypothetical protein | VF |
| CXV92_RS19255 () | 3923678..3924868 | + | 1191 | WP_000509067.1 | hypothetical protein | VF |
| CXV92_RS19260 () | 3924880..3925330 | + | 451 | Protein_3687 | hypothetical protein | - |
| CXV92_RS19265 () | 3925591..3926727 | + | 1137 | Protein_3688 | ISAs1 family transposase ISEc1 | Transposase |
| CXV92_RS19270 () | 3926769..3927539 | - | 771 | WP_001118040.1 | 2-oxoglutaramate amidase | - |
| CXV92_RS19275 () | 3927720..3928166 | + | 447 | WP_001308392.1 | Ivy family C-type lysozyme inhibitor | - |
| CXV92_RS19280 () | 3928209..3930653 | - | 2445 | WP_000973083.1 | hypothetical protein | VF |
| CXV92_RS19285 () | 3930893..3931471 | + | 579 | WP_000284050.1 | hypothetical protein | VF |
| CXV92_RS19290 () | 3931677..3932444 | + | 768 | WP_000333379.1 | class II glutamine amidotransferase | - |
| CXV92_RS19295 () | 3932415..3933155 | - | 741 | WP_001225679.1 | murein L,D-transpeptidase | - |
| CXV92_RS19300 () | 3933456..3934205 | + | 750 | WP_000093940.1 | hypothetical protein | VF |
| CXV92_RS19305 () | 3934381..3934878 | + | 498 | WP_000006259.1 | REP-associated tyrosine transposase RayT | - |
| CXV92_RS19310 () | 3935094..3936806 | - | 1713 | Protein_3697 | hypothetical protein | VF |
| CXV92_RS19315 () | 3936778..3937563 | + | 786 | Protein_3698 | hypothetical protein | VF |
| CXV92_RS19320 () | 3937634..3938689 | + | 1056 | WP_001226182.1 | DNA polymerase IV | - |
| CXV92_RS19325 () | 3938686..3939138 | + | 453 | WP_001059881.1 | GNAT family N-acetyltransferase | - |
| CXV92_RS19330 () | 3939457..3939663 | + | 207 | Protein_3701 | RtcB family protein | - |
| CXV92_RS19335 () | 3939659..3940011 | + | 353 | Protein_3702 | peptide chain release factor H | - |
| CXV92_RS19340 () | 3940068..3941525 | - | 1458 | WP_001293003.1 | cytosol nonspecific dipeptidase | - |
| CXV92_RS19345 () | 3941786..3942244 | + | 459 | WP_001291990.1 | xanthine phosphoribosyltransferase | - |
| CXV92_RS19350 () | 3942336..3943580 | + | 1245 | WP_000189541.1 | esterase FrsA | - |
| - () | 3942840..3942920 | + | 81 | NuclAT_10 | - | - |
| - () | 3942840..3942920 | + | 81 | NuclAT_10 | - | - |
| - () | 3942840..3942920 | + | 81 | NuclAT_10 | - | - |
| - () | 3942840..3942920 | + | 81 | NuclAT_10 | - | - |
| CXV92_RS19355 () | 3943638..3944039 | + | 402 | WP_000174673.1 | sigma factor-binding protein Crl | - |
| CXV92_RS19360 () | 3944078..3945133 | - | 1056 | WP_000749881.1 | phosphoporin PhoE | - |
| CXV92_RS19365 () | 3945421..3946524 | + | 1104 | WP_001285288.1 | glutamate 5-kinase | - |
| CXV92_RS19370 () | 3946536..3947789 | + | 1254 | WP_000893260.1 | glutamate-5-semialdehyde dehydrogenase | - |
| CXV92_RS19380 () | 3947994..3949157 | - | 1164 | WP_000051887.1 | hypothetical protein ; Integrase | Integrase |
| CXV92_RS19390 () | 3949384..3949689 | - | 306 | WP_000206734.1 | hypothetical protein | - |
| CXV92_RS19395 () | 3949689..3950051 | - | 363 | WP_001242749.1 | phage protein | - |
| CXV92_RS19400 () | 3950042..3950578 | - | 537 | WP_000008200.1 | 5'-deoxynucleotidase | - |
| CXV92_RS19405 () | 3950706..3951530 | - | 825 | WP_000081289.1 | DUF2303 family protein | - |
| CXV92_RS19410 () | 3951596..3951958 | - | 363 | WP_000135682.1 | hypothetical protein | - |
| CXV92_RS19415 () | 3951973..3952283 | - | 311 | Protein_3716 | hypothetical protein | - |
| CXV92_RS19420 () | 3952428..3952943 | + | 516 | WP_000559916.1 | hypothetical protein | - |
| CXV92_RS19425 () | 3953158..3953832 | - | 675 | WP_000848748.1 | LexA family transcriptional repressor | - |
| CXV92_RS19430 () | 3953923..3954123 | + | 201 | WP_000649477.1 | helix-turn-helix domain-containing protein | - |
| CXV92_RS19435 () | 3954167..3954724 | + | 558 | WP_000515851.1 | protein YmfL | - |
| CXV92_RS19440 () | 3954900..3955079 | + | 180 | WP_001250269.1 | DUF4222 domain-containing protein | - |
| CXV92_RS19445 () | 3955069..3956010 | + | 942 | WP_000104943.1 | helix-turn-helix domain-containing protein | - |
| CXV92_RS19450 () | 3956026..3956544 | + | 519 | WP_000144126.1 | tail fiber assembly protein | - |
| CXV92_RS19455 () | 3957098..3959086 | + | 1989 | WP_000017384.1 | DEAD/DEAH box helicase | - |
| CXV92_RS19460 () | 3959083..3959721 | + | 639 | WP_000011690.1 | hypothetical protein | - |
| CXV92_RS19465 () | 3960172..3961068 | - | 897 | WP_029379674.1 | hypothetical protein | - |
| CXV92_RS19470 () | 3961071..3962642 | - | 1572 | WP_001748001.1 | IS66 family transposase ISCro1 | Transposase |
| CXV92_RS19475 () | 3962662..3963009 | - | 348 | WP_000624622.1 | IS66 family transposase ISCro1 | Transposase |
| CXV92_RS19480 () | 3963009..3963686 | - | 678 | WP_001339397.1 | IS66 family transposase ISCro1 | Transposase |
| CXV92_RS19490 () | 3964382..3965488 | + | 1107 | WP_126130422.1 | SMEK domain-containing protein | - |
| CXV92_RS19495 () | 3966583..3966924 | - | 342 | WP_000854680.1 | type IV toxin-antitoxin system toxin YkfI | Toxin Detail |
| CXV92_RS19500 () | 3966945..3967262 | - | 318 | WP_000070396.1 | type IV toxin-antitoxin system antitoxin YafW | Antitoxin Detail |
| CXV92_RS19505 () | 3967281..3967502 | - | 222 | WP_000691994.1 | DUF987 domain-containing protein | - |
| CXV92_RS19510 () | 3967511..3967987 | - | 477 | WP_000811693.1 | RadC family protein | - |
| CXV92_RS19515 () | 3968003..3968461 | - | 459 | WP_000211838.1 | antirestriction protein | - |
| CXV92_RS19520 () | 3968559..3968798 | - | 240 | WP_000194654.1 | DUF905 domain-containing protein | - |
| CXV92_RS19525 () | 3968875..3969342 | - | 468 | WP_001385283.1 | hypothetical protein | - |
| CXV92_RS19530 () | 3969365..3969808 | - | 444 | WP_000649865.1 | hypothetical protein | - |
| CXV92_RS19535 () | 3969808..3970044 | - | 237 | WP_001144031.1 | hypothetical protein | - |
| CXV92_RS19540 () | 3970085..3970786 | - | 702 | WP_000189411.1 | WYL domain-containing protein | - |
| CXV92_RS19545 () | 3971003..3971824 | - | 822 | WP_001385280.1 | DUF945 domain-containing protein | - |
| CXV92_RS19550 () | 3971916..3972779 | - | 864 | WP_001065555.1 | GTPase family protein | - |
| CXV92_RS19555 () | 3973211..3973905 | + | 695 | Protein_3743 | IS5 family transposase ISThi1 | Transposase |
| CXV92_RS19560 () | 3973901..3974470 | + | 570 | Protein_3744 | IS5 family transposase ISThi1 | Transposase |
| CXV92_RS19565 () | 3974695..3975846 | - | 1152 | WP_000323729.1 | hypothetical protein | VF |
| CXV92_RS19570 () | 3975871..3976836 | - | 966 | WP_000196689.1 | M48 family metalloprotease | - |
| CXV92_RS19575 () | 3976814..3977311 | - | 498 | WP_000843382.1 | heat resistance protein PsiE-GI | - |
| CXV92_RS19580 () | 3977308..3979023 | - | 1716 | WP_001295706.1 | heat resistance system K+/H+ antiporter KefB-GI | - |
| CXV92_RS19585 () | 3979027..3979467 | - | 441 | WP_000786818.1 | heat resistance system thioredoxin Trx-GI | - |
| CXV92_RS19590 () | 3979457..3980602 | - | 1146 | WP_001166995.1 | hypothetical protein | - |
| CXV92_RS19595 () | 3980682..3981293 | - | 612 | WP_001090787.1 | heat resistance membrane protein HdeD-GI | - |
| CXV92_RS19600 () | 3981383..3982270 | - | 888 | WP_001005473.1 | heat resistance protein YfdX2 | - |
| CXV92_RS19605 () | 3982373..3983287 | - | 915 | WP_001022485.1 | heat resistance protein YfdX1 | - |
| CXV92_RS19610 () | 3983310..3983768 | - | 459 | WP_001275372.1 | hypothetical protein | VF |
| CXV92_RS19615 () | 3983856..3985584 | - | 1729 | Protein_3755 | ATP-dependent metallopeptidase FtsH/Yme1/Tma family protein | - |
| CXV92_RS19620 () | 3985645..3985836 | - | 192 | WP_001295707.1 | hypothetical protein | - |
| CXV92_RS19625 () | 3985836..3988718 | - | 2883 | WP_000101612.1 | hypothetical protein | VF |
| CXV92_RS19630 () | 3988824..3989393 | - | 570 | WP_000350435.1 | hypothetical protein | VF |
| CXV92_RS19635 () | 3989428..3989709 | - | 282 | WP_000643628.1 | helix-turn-helix domain-containing protein | - |
| CXV92_RS26330 () | 3989938..3990201 | - | 264 | WP_001295708.1 | hypothetical protein | - |
| CXV92_RS26335 () | 3990216..3990479 | + | 264 | WP_001247776.1 | transposase | - |
| CXV92_RS19645 () | 3990424..3990588 | + | 165 | Protein_3762 | transposase domain-containing protein | - |
| CXV92_RS19655 () | 3990806..3992104 | + | 1299 | WP_000342159.1 | IS256 family transposase ISSoEn2 | Transposase |
| CXV92_RS19660 () | 3992002..3992489 | - | 488 | Protein_3764 | IS3 family transposase | - |
| CXV92_RS19665 () | 3992570..3994078 | - | 1509 | WP_001474883.1 | group II intron reverse transcriptase/maturase | - |
| CXV92_RS19675 () | 3994751..3995176 | - | 426 | Protein_3766 | IS3 family transposase | - |
| CXV92_RS19680 () | 3995179..3996561 | + | 1383 | Protein_3767 | bifunctional 3-(3-hydroxy-phenyl)propionate/3-hydroxycinnamic acid hydroxylase | - |
| CXV92_RS19685 () | 3996563..3997507 | + | 945 | WP_000543447.1 | 3-carboxyethylcatechol 2,3-dioxygenase | - |
| CXV92_RS19690 () | 3997536..3998402 | + | 867 | WP_000222149.1 | alpha/beta fold hydrolase | - |
| CXV92_RS19695 () | 3998412..3999221 | + | 810 | WP_000184938.1 | 2-keto-4-pentenoate hydratase | - |
| CXV92_RS19700 () | 3999218..4000168 | + | 951 | WP_000044265.1 | acetaldehyde dehydrogenase (acetylating) | - |
| CXV92_RS19705 () | 4000165..4001178 | + | 1014 | WP_001013515.1 | 4-hydroxy-2-oxovalerate aldolase | - |
| CXV92_RS19710 () | 4001248..4002459 | + | 1212 | WP_000213416.1 | 3-(3-hydroxy-phenyl)propionate transporter MhpT | - |
| CXV92_RS19715 () | 4002734..4004137 | + | 1404 | WP_001373486.1 | S-methylmethionine permease | - |
| CXV92_RS19720 () | 4004124..4005056 | + | 933 | WP_000081352.1 | homocysteine S-methyltransferase | - |
| CXV92_RS19725 () | 4005165..4006211 | - | 1047 | WP_000192349.1 | hypothetical protein | VF |
| CXV92_RS19730 () | 4006223..4006570 | - | 348 | Protein_3777 | ABC transporter permease subunit | - |
| CXV92_RS19735 () | 4006587..4007284 | - | 698 | Protein_3778 | IS1 family transposase IS1R | Transposase |
| CXV92_RS19740 () | 4007340..4007513 | + | 174 | Protein_3779 | IS30 family transposase | - |
| CXV92_RS19745 () | 4007523..4007771 | - | 249 | Protein_3780 | IS3 family transposase ISEhe3 | Transposase |
| CXV92_RS19750 () | 4007794..4008144 | - | 351 | WP_001030800.1 | type IV toxin-antitoxin system antitoxin YagB | - |
| CXV92_RS19755 () | 4008238..4009392 | - | 1155 | WP_077628964.1 | IS481 family transposase ISEc19 | Transposase |
| CXV92_RS19760 () | 4009687..4010595 | + | 909 | WP_001136612.1 | 2-keto-3-deoxygluconate aldolase | - |
| CXV92_RS19765 () | 4010610..4012577 | + | 1968 | WP_000151261.1 | xylonate dehydratase YagF | - |
| CXV92_RS19770 () | 4012804..4014186 | + | 1383 | WP_000192863.1 | MFS transporter | - |
| CXV92_RS19775 () | 4014198..4015808 | + | 1611 | WP_000406872.1 | glycoside hydrolase family 43 protein | - |
| CXV92_RS19780 () | 4015813..4016571 | - | 759 | WP_001121657.1 | DNA-binding transcriptional repressor XynR | - |
| CXV92_RS19785 () | 4016710..4017714 | - | 1005 | WP_001281825.1 | hypothetical protein | VF |
| CXV92_RS26670 () | 4017684..4017779 | - | 96 | WP_211180486.1 | putative translational regulatory protein ArgL | - |
| CXV92_RS19790 () | 4017838..4018041 | + | 204 | Protein_3790 | DUF3987 domain-containing protein | - |
| CXV92_RS19795 () | 4018058..4018755 | - | 698 | Protein_3791 | IS1 family transposase IS1R | Transposase |
| CXV92_RS19800 () | 4018784..4019797 | - | 1014 | WP_000212321.1 | hypothetical protein | - |
| CXV92_RS19805 () | 4020566..4021546 | - | 981 | WP_000019435.1 | IS5-like element ISKpn26 family transposase | - |
| CXV92_RS19810 () | 4021796..4022209 | + | 414 | Protein_3794 | gluconate permease | - |
| CXV92_RS19815 () | 4022259..4022954 | - | 696 | WP_000370411.1 | lactate utilization protein C | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|