MGE detailed information
MGE type: Genomic_island MGE length: 9352 bp
Accession: NZ_CP025847 Location: 2278634..2287985 Organism: Escherichia coli strain 602354 Replicon: chromosome
Accession: NZ_CP025847 Location: 2278634..2287985 Organism: Escherichia coli strain 602354 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| CXX15_RS10985 () | 2275365..2276084 | - | 720 | WP_000611288.1 | two-component system response regulator DcuR | - |
| CXX15_RS10990 () | 2276081..2277712 | - | 1632 | WP_001216486.1 | sensor histidine kinase | - |
| CXX15_RS10995 () | 2277893..2278123 | + | 231 | WP_000371700.1 | (4Fe-4S)-binding protein | - |
| CXX15_RS11000 () | 2278135..2278407 | + | 273 | WP_000405647.1 | N-acetyltransferase | - |
| CXX15_RS11005 () | 2278634..2278930 | + | 297 | WP_000398619.1 | type V toxin-antitoxin system endoribonuclease antitoxin GhoS | Antitoxin Detail |
| CXX15_RS11010 () | 2278958..2279131 | + | 174 | WP_001173343.1 | type V toxin-antitoxin system toxin GhoT | Toxin Detail |
| CXX15_RS11015 () | 2279250..2280767 | - | 1518 | WP_001295074.1 | lysine--tRNA ligase | - |
| CXX15_RS11020 () | 2281004..2282461 | - | 1458 | WP_000856834.1 | dipeptide/tripeptide permease DtpC | - |
| CXX15_RS11025 () | 2282520..2284667 | - | 2148 | WP_001295383.1 | lysine decarboxylase CadA | - |
| CXX15_RS11030 () | 2284747..2286081 | - | 1335 | WP_000092909.1 | cadaverine/lysine antiporter | - |
| CXX15_RS11040 () | 2286447..2287985 | - | 1539 | WP_001187182.1 | lysine decarboxylation/transport transcriptional activator CadC | - |
| CXX15_RS11050 () | 2288784..2289359 | - | 576 | WP_001188520.1 | transcriptional regulator | - |
| CXX15_RS11055 () | 2289396..2291093 | - | 1698 | WP_000068978.1 | protein-disulfide reductase DsbD | - |
| CXX15_RS11060 () | 2291069..2291407 | - | 339 | WP_000883400.1 | divalent cation tolerance protein CutA | - |
| CXX15_RS11065 () | 2291523..2292824 | - | 1302 | WP_000961957.1 | anaerobic C4-dicarboxylate transporter DcuA | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|---|---|---|---|---|---|
| Escherichia coli str. K-12 substr. MC4100 | Genomic island | TA20087 | HG738867 | 4238430..4247780 | 0.007 | |
| Escherichia coli str. K-12 substr. W3110 | Genomic island | TA21458 | NC_007779 | 4357262..4366612 | 0.007 | |
| Escherichia coli BW2952 | Genomic island | TA23874 | NC_012759 | 4289342..4298692 | 0.007 | |
| Escherichia coli str. K-12 substr. MC4100 strain K-12 | Genomic island | TA285032 | NZ_HG738867 | 4238430..4247780 | 0.007 |