MGE detailed information
MGE type: Prophage MGE length: 76573 bp
Accession: NZ_CP025757 Location: 877030..953602 Organism: Citrobacter freundii complex sp. CFNIH2 Replicon: chromosome
Accession: NZ_CP025757 Location: 877030..953602 Organism: Citrobacter freundii complex sp. CFNIH2 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| WM46_RS04355 () | 873416..874057 | + | 642 | WP_042318438.1 | bifunctional 4-hydroxy-2-oxoglutarate aldolase/2-dehydro-3-deoxy-phosphogluconate aldolase | - |
| WM46_RS04360 () | 874162..875340 | - | 1179 | WP_102601523.1 | formate-dependent phosphoribosylglycinamide formyltransferase | - |
| WM46_RS04365 () | 875472..875762 | + | 291 | WP_061077810.1 | DNA damage-inducible protein YebG | - |
| WM46_RS04370 () | 875835..876188 | + | 354 | WP_102601524.1 | hypothetical protein | - |
| WM46_RS04375 () | 876283..876942 | + | 660 | WP_102601525.1 | tellurite resistance TerB family protein | - |
| WM46_RS04380 () | 877030..879105 | + | 2076 | WP_102601526.1 | oligopeptidase B | - |
| WM46_RS04385 () | 879087..879749 | - | 663 | WP_043000375.1 | exodeoxyribonuclease X | - |
| WM46_RS04390 () | 879773..880429 | - | 657 | WP_102601527.1 | carbon-nitrogen hydrolase family protein | - |
| WM46_RS04395 () | 880538..880768 | - | 231 | WP_042318454.1 | DNA polymerase III subunit theta | - |
| WM46_RS04400 () | 880906..881280 | + | 375 | WP_061077805.1 | CopC domain-containing protein YobA | - |
| WM46_RS04405 () | 881283..882155 | + | 873 | WP_102601528.1 | copper homeostasis membrane protein CopD | - |
| WM46_RS04410 () | 882172..882510 | + | 339 | WP_061077803.1 | YebY family protein | - |
| - () | 882631..882776 | - | 146 | - | - | Antitoxin Detail |
| - () | 882666..882769 | + | 104 | - | - | Toxin Detail |
| WM46_RS04415 () | 882847..883931 | - | 1085 | Protein_835 | phage integrase Arm DNA-binding domain-containing protein | - |
| WM46_RS04420 () | 883900..884172 | - | 273 | WP_102601529.1 | excisionase | - |
| WM46_RS04425 () | 884332..884634 | - | 303 | WP_059290846.1 | hypothetical protein | - |
| WM46_RS04430 () | 884675..885016 | - | 342 | WP_102601530.1 | hypothetical protein | - |
| WM46_RS04435 () | 884934..885248 | - | 315 | WP_102601531.1 | DUF4222 domain-containing protein | - |
| WM46_RS04440 () | 885226..885564 | - | 339 | WP_102603772.1 | DUF2591 family protein | - |
| WM46_RS04445 () | 885580..885771 | - | 192 | Protein_841 | TraR/DksA C4-type zinc finger protein | - |
| WM46_RS04450 () | 885863..886054 | - | 192 | WP_102601532.1 | DUF1382 family protein | - |
| WM46_RS04455 () | 886051..886347 | - | 297 | WP_102601533.1 | DUF4406 domain-containing protein | - |
| WM46_RS04460 () | 886344..886562 | - | 219 | WP_045332436.1 | hypothetical protein | - |
| WM46_RS04465 () | 886559..887053 | - | 495 | WP_049108575.1 | HNH endonuclease | - |
| WM46_RS04470 () | 887050..888960 | - | 1911 | WP_102601534.1 | phage N-6-adenine-methyltransferase | - |
| WM46_RS04475 () | 889146..889418 | - | 273 | Protein_847 | hypothetical protein | - |
| WM46_RS04480 () | 889433..889915 | - | 483 | WP_102601535.1 | siphovirus Gp157 family protein | - |
| WM46_RS04485 () | 889912..890826 | - | 915 | WP_102601536.1 | recombinase RecT | - |
| WM46_RS04490 () | 890836..891117 | - | 282 | WP_102601537.1 | host nuclease inhibitor GamL | - |
| WM46_RS04495 () | 891190..891399 | - | 210 | WP_102601538.1 | cell division protein FtsZ | - |
| WM46_RS26295 () | 891396..891554 | - | 159 | WP_187394443.1 | hypothetical protein | - |
| WM46_RS04500 () | 891551..891820 | - | 270 | WP_001752702.1 | hypothetical protein | - |
| WM46_RS04505 () | 891952..892470 | - | 519 | WP_102601539.1 | HNH endonuclease | - |
| WM46_RS04510 () | 892507..892752 | - | 246 | WP_102601540.1 | hypothetical protein | - |
| WM46_RS04515 () | 892838..893329 | - | 492 | WP_102601541.1 | hypothetical protein | - |
| WM46_RS04520 () | 893768..893971 | + | 204 | WP_102601542.1 | hypothetical protein | - |
| WM46_RS04525 () | 894015..894395 | - | 381 | WP_102601543.1 | outer membrane protein assembly factor BamE | - |
| WM46_RS04530 () | 894481..894765 | - | 285 | WP_102601544.1 | type II toxin-antitoxin system HicA family toxin | - |
| WM46_RS04535 () | 894777..895073 | - | 297 | WP_102601545.1 | DUF1902 domain-containing protein | - |
| WM46_RS04540 () | 895272..896048 | - | 777 | WP_102601546.1 | helix-turn-helix transcriptional regulator | - |
| WM46_RS04545 () | 896133..896378 | + | 246 | WP_102601547.1 | hypothetical protein | - |
| WM46_RS04550 () | 896409..896954 | + | 546 | WP_102601548.1 | toxin YdaT domain-containing protein | - |
| WM46_RS04555 () | 897048..897743 | + | 696 | WP_102601549.1 | phage antirepressor KilAC domain-containing protein | - |
| WM46_RS04560 () | 897797..898744 | + | 948 | WP_102603773.1 | replication protein | - |
| WM46_RS04565 () | 898741..899427 | + | 687 | WP_102601550.1 | phage replication protein | - |
| WM46_RS04570 () | 899429..899839 | + | 411 | WP_102601551.1 | hypothetical protein | - |
| WM46_RS04575 () | 900115..900399 | + | 285 | Protein_868 | hypothetical protein | - |
| WM46_RS04580 () | 900396..900653 | + | 258 | WP_102601552.1 | DUF4752 family protein | - |
| WM46_RS04585 () | 900650..900847 | + | 198 | WP_102601553.1 | hypothetical protein | - |
| WM46_RS04590 () | 900844..901563 | + | 720 | WP_102601554.1 | hypothetical protein | - |
| WM46_RS04595 () | 901566..901865 | + | 300 | WP_102601555.1 | hypothetical protein | - |
| WM46_RS04600 () | 902393..902971 | + | 579 | WP_102603774.1 | DUF550 domain-containing protein | - |
| WM46_RS04605 () | 903363..903812 | + | 450 | WP_102601556.1 | recombination protein NinB | - |
| WM46_RS04610 () | 903805..903975 | + | 171 | WP_102601557.1 | hypothetical protein | - |
| WM46_RS04615 () | 903968..904258 | + | 291 | WP_102601558.1 | DUF1364 domain-containing protein | - |
| WM46_RS04620 () | 904255..904611 | + | 357 | WP_102601559.1 | RusA family crossover junction endodeoxyribonuclease | - |
| WM46_RS26300 () | 904608..904754 | + | 147 | WP_152405020.1 | YlcG family protein | - |
| WM46_RS04625 () | 904744..905541 | + | 798 | WP_102601560.1 | antitermination protein | - |
| WM46_RS04630 () | 905804..906133 | + | 330 | WP_099530457.1 | phage holin, lambda family | - |
| WM46_RS04635 () | 906120..906569 | + | 450 | WP_102601561.1 | lysozyme | - |
| WM46_RS04640 () | 906566..907096 | + | 531 | WP_102601562.1 | DUF2514 domain-containing protein | - |
| WM46_RS04645 () | 907154..907525 | + | 372 | WP_102601563.1 | hypothetical protein | - |
| WM46_RS04650 () | 907529..908167 | + | 639 | WP_102601564.1 | hypothetical protein | - |
| WM46_RS04655 () | 908199..908687 | + | 489 | WP_102601565.1 | DUF2280 domain-containing protein | - |
| WM46_RS04660 () | 908684..910258 | + | 1575 | WP_102601566.1 | terminase | - |
| WM46_RS04665 () | 910258..911661 | + | 1404 | WP_102601567.1 | DUF4055 domain-containing protein | - |
| WM46_RS04670 () | 911648..912760 | + | 1113 | WP_102601568.1 | hypothetical protein | - |
| WM46_RS04675 () | 913017..913802 | + | 786 | WP_102601569.1 | hypothetical protein | - |
| WM46_RS04680 () | 913812..914759 | + | 948 | WP_060816039.1 | Ig domain-containing protein | - |
| WM46_RS04685 () | 914913..915389 | + | 477 | Protein_891 | Fur-regulated protein | - |
| WM46_RS04690 () | 915540..915767 | + | 228 | WP_102601570.1 | hypothetical protein | - |
| WM46_RS04695 () | 915787..917244 | + | 1458 | WP_102601571.1 | glycosyltransferase | - |
| WM46_RS04700 () | 917226..917840 | + | 615 | WP_102601572.1 | hypothetical protein | - |
| WM46_RS04705 () | 917837..918319 | + | 483 | WP_102601573.1 | hypothetical protein | - |
| WM46_RS04710 () | 918319..918669 | + | 351 | WP_102601574.1 | hypothetical protein | - |
| WM46_RS04715 () | 918671..919255 | + | 585 | WP_102601575.1 | hypothetical protein | - |
| WM46_RS04720 () | 919252..919662 | + | 411 | WP_102601576.1 | DUF4128 domain-containing protein | - |
| WM46_RS04725 () | 919727..920407 | + | 681 | WP_102601577.1 | phage tail protein | - |
| WM46_RS04730 () | 920452..920802 | + | 351 | WP_102601578.1 | hypothetical protein | - |
| WM46_RS04735 () | 920865..921110 | + | 246 | WP_102601579.1 | DUF1799 domain-containing protein | - |
| WM46_RS04740 () | 921273..921800 | + | 528 | WP_102601580.1 | KilA-N domain-containing protein | - |
| WM46_RS04745 () | 921853..924783 | + | 2931 | WP_102601581.1 | phage tail tape measure protein | - |
| WM46_RS04750 () | 924849..925073 | + | 225 | WP_187394444.1 | hypothetical protein | - |
| WM46_RS04755 () | 925060..925287 | - | 228 | WP_102601583.1 | hypothetical protein | - |
| WM46_RS04760 () | 925452..925802 | + | 351 | WP_102601584.1 | phage tail protein | - |
| WM46_RS04765 () | 925802..926572 | + | 771 | WP_102601585.1 | phage minor tail protein L | - |
| WM46_RS04770 () | 926585..927316 | + | 732 | WP_102601586.1 | C40 family peptidase | - |
| WM46_RS04775 () | 927304..927903 | + | 600 | WP_102601587.1 | tail assembly protein | - |
| WM46_RS04780 () | 927932..928885 | + | 954 | WP_102601588.1 | hypothetical protein | - |
| WM46_RS04785 () | 928893..929288 | + | 396 | WP_102601589.1 | hypothetical protein | - |
| WM46_RS04795 () | 929656..932856 | + | 3201 | WP_102601591.1 | host specificity protein J | - |
| WM46_RS04800 () | 932856..933815 | + | 960 | WP_102601592.1 | hypothetical protein | - |
| WM46_RS04805 () | 933819..934073 | - | 255 | WP_102601593.1 | hypothetical protein | - |
| WM46_RS04810 () | 934211..935419 | + | 1209 | WP_102601594.1 | tail fiber domain-containing protein | - |
| WM46_RS04815 () | 935554..935793 | - | 240 | WP_102601595.1 | DinI family protein | - |
| WM46_RS04825 () | 936091..936561 | + | 471 | Protein_917 | hypothetical protein | - |
| WM46_RS04830 () | 936745..936924 | + | 180 | WP_102601597.1 | hypothetical protein | - |
| WM46_RS04835 () | 936932..937426 | + | 495 | WP_102601598.1 | type II toxin-antitoxin system death-on-curing family toxin | - |
| WM46_RS04840 () | 937914..938576 | + | 663 | WP_102601599.1 | protein-serine/threonine phosphatase | - |
| WM46_RS04845 () | 938577..938768 | - | 192 | WP_061077801.1 | YebW family protein | - |
| WM46_RS04850 () | 938870..939106 | - | 237 | WP_167382411.1 | DUF1480 family protein | - |
| WM46_RS04855 () | 939221..940762 | - | 1542 | WP_102601600.1 | 16S rRNA (cytosine(1407)-C(5))-methyltransferase RsmF | - |
| WM46_RS04860 () | 940738..943371 | - | 2634 | WP_061077799.1 | PqiB family protein | - |
| WM46_RS04865 () | 943340..944623 | - | 1284 | WP_061077798.1 | membrane integrity lipid transport subunit YebS | - |
| WM46_RS04870 () | 944754..945251 | + | 498 | WP_102601601.1 | GAF domain-containing protein | - |
| WM46_RS04875 () | 945349..946035 | + | 687 | WP_043000397.1 | RNA chaperone ProQ | - |
| WM46_RS04880 () | 946055..948103 | + | 2049 | WP_061077796.1 | carboxy terminal-processing peptidase | - |
| WM46_RS04885 () | 948297..949178 | + | 882 | WP_042318474.1 | protease HtpX | - |
| WM46_RS04890 () | 949223..950596 | - | 1374 | WP_102601602.1 | MFS transporter | - |
| WM46_RS04895 () | 950773..951564 | + | 792 | WP_061077794.1 | DNA-binding transcriptional regulator KdgR | - |
| WM46_RS04900 () | 951675..951914 | - | 240 | WP_043001907.1 | membrane protein | - |
| WM46_RS04905 () | 952075..952218 | + | 144 | WP_042318479.1 | PhoP/PhoQ regulator MgrB | - |
| WM46_RS04910 () | 952293..952580 | + | 288 | WP_061077793.1 | YebO family protein | - |
| WM46_RS04915 () | 953237..953380 | + | 144 | WP_043000402.1 | YobF family protein | - |
| WM46_RS04920 () | 953393..953602 | + | 210 | WP_001062678.1 | transcription antiterminator/RNA stability regulator CspE | - |
| WM46_RS04925 () | 953823..955568 | + | 1746 | WP_102601603.1 | peptidoglycan glycosyltransferase FtsI | - |
| WM46_RS04930 () | 955632..956441 | + | 810 | WP_102601604.1 | 23S rRNA (guanine(745)-N(1))-methyltransferase | - |
| WM46_RS04935 () | 956438..957004 | - | 567 | WP_187394445.1 | manganese efflux pump MntP | - |
| WM46_RS04945 () | 957422..957880 | - | 459 | WP_102601606.1 | DUF986 family protein | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|