MGE detailed information
MGE type: Prophage MGE length: 53049 bp
Accession: NZ_CP025753 Location: 4461236..4514284 Organism: Escherichia coli strain CV839-06 Replicon: chromosome
Accession: NZ_CP025753 Location: 4461236..4514284 Organism: Escherichia coli strain CV839-06 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| CV83906_RS23900 () | 4457749..4458495 | + | 747 | WP_000636571.1 | bifunctional NADP-dependent 3-hydroxy acid dehydrogenase/3-hydroxypropionate dehydrogenase YdfG | - |
| CV83906_RS23905 () | 4458584..4459270 | + | 687 | WP_000215549.1 | DNA-binding transcriptional regulator YdfH | - |
| CV83906_RS23910 () | 4459448..4459651 | + | 204 | WP_000214712.1 | putative selenium delivery protein YdfZ | - |
| CV83906_RS23915 () | 4459687..4461147 | - | 1461 | WP_000527758.1 | mannitol dehydrogenase family protein | - |
| CV83906_RS23920 () | 4461236..4462519 | - | 1284 | Protein_4159 | MHS family MFS transporter YdfJ | - |
| CV83906_RS26715 () | 4463124..4463237 | + | 114 | WP_122985608.1 | hypothetical protein | - |
| CV83906_RS23925 () | 4463306..4463539 | + | 234 | WP_000836768.1 | cold shock protein YdfK | - |
| CV83906_RS23930 () | 4463857..4464447 | + | 591 | WP_000086527.1 | Tn3 family transposase TnpR_ISSba14 | Transposase |
| CV83906_RS23935 () | 4464545..4465120 | - | 576 | WP_000885587.1 | tail fiber assembly protein | - |
| CV83906_RS23940 () | 4465120..4468143 | - | 3024 | WP_024183964.1 | prophage tail fiber N-terminal domain-containing protein | - |
| CV83906_RS23945 () | 4468208..4468807 | - | 600 | WP_001230352.1 | Outer membrane protein X | VF |
| CV83906_RS23950 () | 4468874..4472272 | - | 3399 | WP_000515631.1 | host specificity protein J | - |
| CV83906_RS23955 () | 4472333..4472980 | - | 648 | WP_023277304.1 | tail assembly protein | - |
| CV83906_RS23960 () | 4472878..4473621 | - | 744 | WP_000194816.1 | C40 family peptidase | - |
| CV83906_RS23965 () | 4473627..4474325 | - | 699 | WP_001152385.1 | phage minor tail protein L | - |
| CV83906_RS23970 () | 4474335..4474664 | - | 330 | WP_000447253.1 | phage tail protein | - |
| CV83906_RS23975 () | 4474664..4477729 | - | 3066 | WP_000372058.1 | phage tail tape measure protein | - |
| CV83906_RS23980 () | 4477701..4478030 | - | 330 | WP_001161009.1 | phage tail assembly protein T | - |
| CV83906_RS23985 () | 4478039..4478425 | - | 387 | WP_001384509.1 | phage minor tail protein G | - |
| CV83906_RS23990 () | 4478486..4479229 | - | 744 | WP_000211131.1 | phage tail protein | - |
| CV83906_RS23995 () | 4479240..4479641 | - | 402 | WP_001079398.1 | phage minor tail U family protein | - |
| CV83906_RS24000 () | 4479638..4480216 | - | 579 | WP_000677102.1 | phage tail protein | - |
| CV83906_RS24005 () | 4480228..4480503 | - | 276 | WP_001283152.1 | DNA breaking-rejoining protein | - |
| CV83906_RS24010 () | 4480496..4480819 | - | 324 | WP_001097052.1 | DUF2190 family protein | - |
| CV83906_RS24015 () | 4480906..4482933 | - | 2028 | WP_001136599.1 | ATP-dependent Clp protease proteolytic subunit | VF |
| CV83906_RS24020 () | 4482911..4484458 | - | 1548 | WP_077631397.1 | phage portal protein | - |
| CV83906_RS24025 () | 4484386..4484598 | - | 213 | WP_001072975.1 | hypothetical protein | - |
| CV83906_RS24030 () | 4484595..4486694 | - | 2100 | WP_000507032.1 | phage terminase large subunit family protein | - |
| CV83906_RS24035 () | 4486703..4487242 | - | 540 | WP_000421825.1 | DUF1441 family protein | - |
| CV83906_RS24040 () | 4487811..4488017 | - | 207 | WP_001031431.1 | hypothetical protein | - |
| CV83906_RS24050 () | 4488318..4488728 | + | 411 | WP_000035574.1 | DUF1398 domain-containing protein | - |
| CV83906_RS24055 () | 4488880..4489053 | - | 174 | WP_001019606.1 | addiction module toxin, GnsA/GnsB family | - |
| CV83906_RS26720 () | 4489225..4489380 | - | 156 | WP_001309517.1 | hypothetical protein | - |
| CV83906_RS26725 () | 4489460..4489525 | - | 66 | WP_122134696.1 | hypothetical protein | - |
| CV83906_RS24065 () | 4489528..4489716 | - | 189 | WP_071524604.1 | cold-shock protein | - |
| CV83906_RS24070 () | 4489727..4489939 | - | 213 | WP_000066495.1 | cold shock protein CspI | - |
| CV83906_RS24075 () | 4490303..4490800 | - | 498 | WP_001071769.1 | DUF2514 domain-containing protein | - |
| CV83906_RS24080 () | 4490797..4491330 | - | 534 | WP_001092971.1 | lysozyme | - |
| CV83906_RS24085 () | 4491327..4491638 | - | 312 | WP_000189915.1 | YdfR family protein | - |
| CV83906_RS24090 () | 4491643..4491858 | - | 216 | WP_000839590.1 | phage lysis protein EssD | - |
| CV83906_RS27040 () | 4492078..4492248 | + | 171 | WP_001405948.1 | putative zinc-binding protein YnfU | - |
| CV83906_RS24095 () | 4492612..4492827 | - | 216 | WP_000066484.1 | cold shock-like protein CspB | - |
| CV83906_RS24100 () | 4493128..4493340 | + | 213 | WP_000087756.1 | cold shock-like protein CspF | - |
| CV83906_RS26730 () | 4493395..4493484 | + | 90 | WP_120795389.1 | hypothetical protein | - |
| CV83906_RS24105 () | 4493762..4494514 | - | 753 | WP_001047135.1 | antitermination protein | - |
| CV83906_RS24110 () | 4494528..4495577 | - | 1050 | WP_001265198.1 | DUF968 domain-containing protein | - |
| CV83906_RS24115 () | 4495579..4495857 | - | 279 | WP_012304870.1 | hypothetical protein | - |
| CV83906_RS24120 () | 4495924..4496175 | - | 252 | WP_000980994.1 | hypothetical protein | - |
| CV83906_RS24125 () | 4496392..4496547 | - | 156 | WP_000813254.1 | type I toxin-antitoxin system toxin HokD | - |
| CV83906_RS24130 () | 4496619..4496906 | - | 288 | WP_000323025.1 | type II toxin-antitoxin system mRNA interferase RelE | Toxin Detail |
| CV83906_RS24135 () | 4496906..4497145 | - | 240 | WP_000534858.1 | type II toxin-antitoxin system antitoxin RelB | Antitoxin Detail |
| CV83906_RS24140 () | 4497170..4497475 | + | 306 | WP_001326990.1 | hypothetical protein | - |
| CV83906_RS24145 () | 4497678..4498010 | + | 333 | WP_001317460.1 | FlxA-like family protein | - |
| CV83906_RS24155 () | 4498447..4499787 | - | 1341 | WP_000589012.1 | ISNCY family transposase ISCARN112 | Transposase |
| CV83906_RS24160 () | 4499821..4500240 | - | 420 | WP_001151195.1 | DUF977 family protein | - |
| CV83906_RS24165 () | 4500281..4501246 | - | 966 | WP_000054506.1 | hypothetical protein | - |
| CV83906_RS24170 () | 4501227..4501748 | - | 522 | WP_000705349.1 | hypothetical protein | - |
| CV83906_RS24175 () | 4501732..4501959 | - | 228 | WP_000476993.1 | transcriptional regulator | - |
| CV83906_RS24180 () | 4502037..4502444 | + | 408 | WP_001003381.1 | helix-turn-helix domain-containing protein | - |
| CV83906_RS24190 () | 4502636..4502791 | + | 156 | WP_000379589.1 | DUF1391 family protein | - |
| CV83906_RS24195 () | 4502793..4503368 | + | 576 | WP_000344954.1 | hypothetical protein | - |
| CV83906_RS24200 () | 4503855..4504043 | + | 189 | WP_000854559.1 | cell division inhibition protein DicB | - |
| CV83906_RS24205 () | 4504040..4504207 | + | 168 | Protein_4217 | lysis protein YdfD | - |
| CV83906_RS24215 () | 4505629..4505970 | + | 342 | WP_000705211.1 | DUF1283 family protein | - |
| CV83906_RS24220 () | 4506005..4506565 | + | 561 | WP_001138581.1 | spermidine N1-acetyltransferase | - |
| CV83906_RS24225 () | 4506568..4507278 | - | 711 | WP_001321287.1 | YnfC family lipoprotein | - |
| CV83906_RS24230 () | 4507386..4507691 | + | 306 | WP_001307224.1 | DUF1161 domain-containing protein | - |
| CV83906_RS24235 () | 4507890..4510316 | + | 2427 | WP_000041558.1 | dimethyl sulfoxide reductase subunit A | - |
| CV83906_RS24240 () | 4510377..4512800 | + | 2424 | WP_001384504.1 | dimethyl sulfoxide reductase subunit A | - |
| CV83906_RS24245 () | 4512811..4513428 | + | 618 | WP_000213028.1 | dimethylsulfoxide reductase subunit B | - |
| CV83906_RS24250 () | 4513430..4514284 | + | 855 | WP_000526490.1 | dimethyl sulfoxide reductase anchor subunit | - |
| CV83906_RS24255 () | 4514327..4514941 | + | 615 | WP_000148710.1 | Tat proofreading chaperone DmsD | - |
| CV83906_RS24260 () | 4515100..4516392 | + | 1293 | WP_071586481.1 | voltage-gated ClC-type chloride channel ClcB | - |
| CV83906_RS24265 () | 4516345..4517040 | - | 696 | WP_000919231.1 | dethiobiotin synthase | - |
| CV83906_RS24270 () | 4517165..4518385 | - | 1221 | WP_000225276.1 | DNA-binding transcriptional repressor Mlc | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|