MGE detailed information
MGE type: Prophage MGE length: 58562 bp
Accession: NZ_CP025747 Location: 2497634..2556195 Organism: Escherichia coli strain ML35 Replicon: chromosome
Accession: NZ_CP025747 Location: 2497634..2556195 Organism: Escherichia coli strain ML35 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| C1I23_RS13390 () | 2493737..2494723 | - | 987 | Protein_2450 | GGDEF domain-containing protein | - |
| C1I23_RS13395 () | 2494796..2495155 | - | 360 | WP_001191027.1 | DUF4186 domain-containing protein | - |
| C1I23_RS13400 () | 2495155..2496081 | - | 927 | WP_000257409.1 | glutaminase B | - |
| C1I23_RS13405 () | 2496145..2497533 | - | 1389 | WP_000156615.1 | succinate-semialdehyde dehydrogenase | - |
| C1I23_RS13410 () | 2497634..2498515 | + | 882 | WP_000366501.1 | hypothetical protein | VF |
| C1I23_RS13415 () | 2498593..2499708 | + | 1116 | WP_000258599.1 | putative protein YneK | - |
| C1I23_RS13420 () | 2499858..2501048 | + | 1191 | WP_000210799.1 | L-arabinose MFS transporter | - |
| C1I23_RS13425 () | 2501073..2501738 | - | 666 | WP_000885033.1 | NAAT family transporter MarC | - |
| C1I23_RS13430 () | 2501950..2502384 | + | 435 | WP_000843414.1 | multiple antibiotic resistance transcriptional regulator MarR | - |
| C1I23_RS13435 () | 2502404..2502787 | + | 384 | WP_000091199.1 | hypothetical protein | VF |
| C1I23_RS13440 () | 2502819..2503037 | + | 219 | WP_000803657.1 | multiple antibiotic resistance protein MarB | - |
| C1I23_RS13445 () | 2503068..2503967 | - | 900 | WP_000087187.1 | O-acetylserine/cysteine exporter | - |
| C1I23_RS13450 () | 2504162..2505349 | + | 1188 | WP_001054183.1 | efflux MFS transporter YdeE | - |
| C1I23_RS13455 () | 2505476..2505571 | + | 96 | WP_000901367.1 | protein MgtS | - |
| C1I23_RS26475 () | 2505571..2505675 | + | 105 | WP_211180496.1 | protein MgtT | - |
| C1I23_RS13460 () | 2505790..2506680 | - | 891 | WP_000592814.1 | diguanylate cyclase DgcZ | - |
| C1I23_RS13465 () | 2506935..2507327 | - | 393 | WP_000671737.1 | YdeI family stress tolerance OB fold protein | - |
| C1I23_RS13470 () | 2507603..2508121 | + | 519 | WP_001024746.1 | 2-oxo-tetronate isomerase | - |
| C1I23_RS13475 () | 2508165..2510210 | - | 2046 | WP_045173419.1 | peptidyl-dipeptidase Dcp | - |
| C1I23_RS13480 () | 2510347..2511093 | + | 747 | WP_000636571.1 | hypothetical protein | VF |
| C1I23_RS13485 () | 2511182..2511868 | + | 687 | WP_000215549.1 | DNA-binding transcriptional regulator YdfH | - |
| C1I23_RS13490 () | 2512045..2512248 | + | 204 | WP_000214712.1 | putative selenium delivery protein YdfZ | - |
| C1I23_RS13495 () | 2512283..2513743 | - | 1461 | WP_000527809.1 | mannitol dehydrogenase family protein | - |
| C1I23_RS13500 () | 2513832..2515115 | - | 1284 | Protein_2473 | MHS family MFS transporter YdfJ | - |
| C1I23_RS26090 () | 2515719..2515832 | + | 114 | WP_120795384.1 | hypothetical protein | - |
| C1I23_RS13505 () | 2515901..2516134 | + | 234 | WP_000836768.1 | cold shock protein YdfK | - |
| C1I23_RS13510 () | 2516451..2517041 | + | 591 | WP_000086522.1 | Tn3 family transposase TnpR_ISSba14 | Transposase |
| C1I23_RS13515 () | 2517139..2517714 | - | 576 | WP_000885600.1 | tail fiber assembly protein | - |
| C1I23_RS13520 () | 2517714..2518022 | - | 309 | WP_071524888.1 | phage tail protein | - |
| C1I23_RS13525 () | 2517989..2518315 | - | 327 | Protein_2479 | phage tail protein | - |
| C1I23_RS13530 () | 2518273..2518818 | - | 546 | WP_000453589.1 | DNA-packaging protein | - |
| C1I23_RS13540 () | 2519207..2519440 | + | 234 | WP_001368374.1 | YlcI/YnfO family protein | - |
| C1I23_RS13545 () | 2519498..2519908 | + | 411 | WP_000373090.1 | DUF1398 domain-containing protein | - |
| C1I23_RS13550 () | 2520060..2520233 | - | 174 | WP_001019606.1 | addiction module toxin, GnsA/GnsB family | - |
| C1I23_RS26095 () | 2520405..2520560 | - | 156 | WP_001309517.1 | hypothetical protein | - |
| C1I23_RS26100 () | 2520640..2520705 | - | 66 | WP_120795388.1 | hypothetical protein | - |
| C1I23_RS13560 () | 2520708..2520896 | - | 189 | WP_071524604.1 | cold-shock protein | - |
| C1I23_RS13565 () | 2520907..2521119 | - | 213 | WP_000066495.1 | cold shock protein CspI | - |
| C1I23_RS13570 () | 2521482..2521979 | - | 498 | WP_001071769.1 | DUF2514 domain-containing protein | - |
| C1I23_RS13575 () | 2521976..2522509 | - | 534 | WP_001092971.1 | lysozyme | - |
| C1I23_RS13580 () | 2522506..2522817 | - | 312 | WP_000189916.1 | YdfR family protein | - |
| C1I23_RS13585 () | 2522822..2523037 | - | 216 | WP_000839590.1 | phage lysis protein EssD | - |
| C1I23_RS26480 () | 2523257..2523427 | + | 171 | WP_211180497.1 | putative zinc-binding protein YnfU | - |
| C1I23_RS13590 () | 2523791..2524006 | - | 216 | WP_000066484.1 | cold shock-like protein CspB | - |
| C1I23_RS13595 () | 2524307..2524519 | + | 213 | WP_000087756.1 | cold shock-like protein CspF | - |
| C1I23_RS26105 () | 2524574..2524663 | + | 90 | WP_120795389.1 | hypothetical protein | - |
| C1I23_RS13600 () | 2524941..2525693 | - | 753 | WP_001047135.1 | antitermination protein | - |
| C1I23_RS13605 () | 2525707..2526756 | - | 1050 | WP_001265198.1 | DUF968 domain-containing protein | - |
| C1I23_RS13610 () | 2526758..2527036 | - | 279 | WP_012304870.1 | hypothetical protein | - |
| C1I23_RS13615 () | 2527103..2527354 | - | 252 | WP_000980994.1 | hypothetical protein | - |
| C1I23_RS13620 () | 2527571..2527726 | - | 156 | WP_000813254.1 | type I toxin-antitoxin system toxin HokD | - |
| C1I23_RS13625 () | 2527798..2528085 | - | 288 | WP_000323025.1 | type II toxin-antitoxin system mRNA interferase RelE | Toxin Detail |
| C1I23_RS13630 () | 2528085..2528324 | - | 240 | WP_000534858.1 | type II toxin-antitoxin system antitoxin RelB | Antitoxin Detail |
| C1I23_RS13635 () | 2528349..2528654 | + | 306 | WP_001326990.1 | hypothetical protein | - |
| C1I23_RS13640 () | 2528857..2529189 | + | 333 | WP_001301033.1 | protein FlxA | - |
| C1I23_RS13650 () | 2529626..2530939 | - | 1314 | WP_000589005.1 | ISNCY family transposase ISCARN112 | Transposase |
| C1I23_RS26305 () | 2531708..2531995 | - | 288 | Protein_2506 | hypothetical protein | - |
| C1I23_RS13665 () | 2532606..2532962 | - | 357 | WP_001310834.1 | class I SAM-dependent methyltransferase | - |
| C1I23_RS13670 () | 2532959..2533210 | - | 252 | Protein_2508 | DUF977 family protein | - |
| C1I23_RS13675 () | 2533200..2533580 | + | 381 | Protein_2509 | hypothetical protein | - |
| C1I23_RS13680 () | 2533623..2534519 | - | 897 | Protein_2510 | IS3 family transposase ISSd1 | Transposase |
| C1I23_RS13685 () | 2534526..2535677 | - | 1152 | WP_001254876.1 | IS30 family transposase IS30D | Transposase |
| C1I23_RS13690 () | 2535742..2536002 | - | 261 | Protein_2512 | IS3 family transposase ISSfl10 | Transposase |
| C1I23_RS13695 () | 2536065..2537672 | + | 1608 | Protein_2513 | 3'-5' exoribonuclease | - |
| C1I23_RS13700 () | 2537745..2537996 | + | 252 | WP_000005552.1 | excisionase family protein | - |
| C1I23_RS13705 () | 2538031..2539311 | + | 1281 | WP_000876958.1 | hypothetical protein ; Integrase | Integrase |
| C1I23_RS13715 () | 2539499..2540518 | - | 1020 | WP_000836066.1 | Zn-dependent oxidoreductase | - |
| C1I23_RS13720 () | 2540530..2541744 | - | 1215 | WP_001295394.1 | starvation-sensing protein RspA | - |
| C1I23_RS13730 () | 2541950..2542276 | - | 327 | WP_000598292.1 | YnfA family protein | - |
| C1I23_RS13735 () | 2542411..2542752 | + | 342 | WP_000705211.1 | DUF1283 family protein | - |
| C1I23_RS13740 () | 2542787..2543347 | + | 561 | WP_001138581.1 | spermidine N1-acetyltransferase | - |
| C1I23_RS13745 () | 2543350..2544060 | - | 711 | WP_001321287.1 | YnfC family lipoprotein | - |
| C1I23_RS13750 () | 2544168..2544473 | + | 306 | WP_001300836.1 | DUF1161 domain-containing protein | - |
| C1I23_RS13755 () | 2544672..2547098 | + | 2427 | WP_000041675.1 | dimethyl sulfoxide reductase subunit A | - |
| C1I23_RS13760 () | 2547159..2549582 | + | 2424 | WP_001340362.1 | dimethyl sulfoxide reductase subunit A | - |
| C1I23_RS13765 () | 2549593..2550210 | + | 618 | WP_000213028.1 | dimethylsulfoxide reductase subunit B | - |
| C1I23_RS13770 () | 2550212..2551066 | + | 855 | WP_102597171.1 | dimethyl sulfoxide reductase anchor subunit | - |
| C1I23_RS13775 () | 2551109..2551723 | + | 615 | WP_000148710.1 | Tat proofreading chaperone DmsD | - |
| C1I23_RS13780 () | 2551882..2553174 | + | 1293 | WP_001315626.1 | voltage-gated ClC-type chloride channel ClcB | - |
| C1I23_RS13785 () | 2553127..2553822 | - | 696 | WP_000919231.1 | dethiobiotin synthase | - |
| C1I23_RS13790 () | 2553947..2555167 | - | 1221 | WP_000225262.1 | DNA-binding transcriptional repressor Mlc | - |
| C1I23_RS13795 () | 2555302..2556195 | - | 894 | WP_001019525.1 | hypothetical protein | VF |
| C1I23_RS13800 () | 2556302..2557555 | + | 1254 | WP_000091840.1 | MFS transporter | - |
| C1I23_RS26485 () | 2557604..2557723 | - | 120 | WP_001299090.1 | hypothetical protein | - |
| C1I23_RS13810 () | 2557979..2558287 | + | 309 | WP_001340364.1 | acid resistance repetitive basic protein Asr | - |
| C1I23_RS13815 () | 2558380..2558463 | + | 84 | WP_000233090.1 | hypothetical protein | - |
| C1I23_RS13820 () | 2558563..2559384 | + | 822 | WP_001260865.1 | serine protease | - |
| C1I23_RS13825 () | 2559423..2559752 | - | 330 | WP_000046661.1 | multidrug/spermidine efflux SMR transporter subunit MdtI | - |
| C1I23_RS13830 () | 2559739..2560104 | - | 366 | WP_000276149.1 | multidrug/spermidine efflux SMR transporter subunit MdtJ | - |
| C1I23_RS26490 () | 2560211..2560312 | - | 102 | WP_211180498.1 | protein YdgV | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|