MGE detailed information
MGE type: Prophage MGE length: 71361 bp
Accession: NZ_CP025747 Location: 2243938..2315298 Organism: Escherichia coli strain ML35 Replicon: chromosome
Accession: NZ_CP025747 Location: 2243938..2315298 Organism: Escherichia coli strain ML35 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| C1I23_RS12085 () | 2239151..2239939 | + | 789 | WP_000690229.1 | sugar phosphate isomerase/epimerase | - |
| C1I23_RS12090 () | 2239949..2241004 | + | 1056 | WP_001300711.1 | Gfo/Idh/MocA family oxidoreductase | - |
| C1I23_RS12095 () | 2241001..2243268 | + | 2268 | WP_000198036.1 | kojibiose phosphorylase | - |
| C1I23_RS12100 () | 2243265..2243924 | + | 660 | WP_000775794.1 | beta-phosphoglucomutase | - |
| C1I23_RS12105 () | 2243938..2245020 | + | 1083 | WP_000057955.1 | hypothetical protein | VF |
| C1I23_RS12110 () | 2245065..2245970 | + | 906 | WP_000735257.1 | monomeric porin OmpG | - |
| C1I23_RS12115 () | 2246081..2247079 | - | 999 | WP_000075375.1 | LacI family transcriptional regulator | - |
| C1I23_RS12120 () | 2247235..2248632 | + | 1398 | WP_000825775.1 | YcjX family protein | - |
| C1I23_RS12125 () | 2248629..2249690 | + | 1062 | WP_000138728.1 | YcjF family protein | - |
| C1I23_RS12130 () | 2249838..2251379 | + | 1542 | WP_001300658.1 | hypothetical protein | VF |
| C1I23_RS12135 () | 2251423..2251929 | - | 507 | WP_000084387.1 | thiol peroxidase | - |
| C1I23_RS12140 () | 2252048..2253013 | + | 966 | WP_001261211.1 | L-Ala-D/L-Glu epimerase | - |
| C1I23_RS12145 () | 2252988..2253716 | - | 729 | WP_000219122.1 | murein tripeptide amidase MpaA | - |
| C1I23_RS12150 () | 2253843..2253980 | - | 138 | Protein_2227 | NAD-dependent dehydratase | - |
| C1I23_RS12155 () | 2254051..2254996 | - | 946 | Protein_2228 | alpha/beta hydrolase | - |
| C1I23_RS12160 () | 2255134..2256033 | + | 900 | WP_045174314.1 | hypothetical protein | VF |
| C1I23_RS12165 () | 2256370..2257983 | + | 1614 | WP_102597163.1 | murein tripeptide ABC transporter substrate-binding protein MppA | - |
| C1I23_RS12170 () | 2258034..2259065 | - | 1032 | WP_000559900.1 | low conductance mechanosensitive channel YnaI | - |
| C1I23_RS12175 () | 2259309..2259566 | + | 258 | WP_000605090.1 | DUF2534 family protein | - |
| C1I23_RS12180 () | 2259616..2260566 | - | 951 | WP_001262123.1 | universal stress protein UspE | - |
| C1I23_RS12185 () | 2260718..2261470 | - | 753 | WP_000611911.1 | fumarate/nitrate reduction transcriptional regulator Fnr | - |
| C1I23_RS12190 () | 2261665..2262180 | - | 516 | WP_000945011.1 | methylated-DNA--[protein]-cysteine S-methyltransferase | - |
| C1I23_RS12195 () | 2262191..2263717 | - | 1527 | WP_000062973.1 | p-aminobenzoyl-glutamate transporter | - |
| C1I23_RS12205 () | 2263754..2265199 | - | 1446 | WP_001156451.1 | p-aminobenzoyl-glutamate hydrolase subunit AbgB | - |
| C1I23_RS12210 () | 2265199..2266509 | - | 1311 | WP_000444929.1 | p-aminobenzoyl-glutamate hydrolase subunit AbgA | - |
| C1I23_RS12215 () | 2266685..2267593 | + | 909 | WP_000885454.1 | LysR family transcriptional regulator | - |
| C1I23_RS12225 () | 2267923..2268486 | + | 564 | WP_001046829.1 | DNA endonuclease SmrA | - |
| C1I23_RS12230 () | 2268507..2269739 | - | 1233 | WP_000628058.1 | diguanylate cyclase DgcM | - |
| C1I23_RS26465 () | 2269933..2269980 | + | 48 | WP_211180494.1 | protein YnaN | - |
| C1I23_RS12235 () | 2269994..2270977 | + | 984 | WP_000387388.1 | zinc transporter ZntB | - |
| C1I23_RS12245 () | 2271455..2272828 | + | 1374 | WP_000123737.1 | ATP-dependent RNA helicase DbpA | - |
| C1I23_RS12250 () | 2272957..2273892 | - | 936 | WP_001157376.1 | tRNA 2-thiocytidine(32) synthetase TtcA | - |
| C1I23_RS12255 () | 2273945..2275180 | - | 1236 | WP_000040838.1 | hypothetical protein ; Integrase | Integrase |
| C1I23_RS12260 () | 2275182..2275397 | - | 216 | WP_000079604.1 | excisionase XisR | - |
| C1I23_RS12265 () | 2275497..2275685 | - | 189 | WP_001298826.1 | DUF1187 family protein | - |
| - () | 2275501..2275679 | + | 179 | NuclAT_0 | - | Antitoxin Detail |
| - () | 2275501..2275679 | + | 179 | NuclAT_0 | - | Antitoxin Detail |
| - () | 2275501..2275679 | + | 179 | NuclAT_0 | - | Antitoxin Detail |
| - () | 2275501..2275679 | + | 179 | NuclAT_0 | - | Antitoxin Detail |
| C1I23_RS12270 () | 2275678..2275872 | - | 195 | WP_021500490.1 | type I toxin-antitoxin system endodeoxyribonuclease toxin RalR | Toxin Detail |
| C1I23_RS12275 () | 2275936..2276988 | - | 1053 | WP_001004423.1 | recombinase RecT | - |
| C1I23_RS12280 () | 2277000..2280125 | - | 3126 | WP_000102216.1 | exodeoxyribonuclease VIII | - |
| C1I23_RS12285 () | 2280227..2280501 | - | 275 | Protein_2252 | hypothetical protein | - |
| C1I23_RS12290 () | 2280576..2280752 | - | 177 | WP_000245528.1 | hypothetical protein | - |
| C1I23_RS12295 () | 2280746..2280967 | - | 222 | WP_000560227.1 | cell division protein FtsZ | - |
| C1I23_RS12305 () | 2281537..2281746 | + | 210 | WP_001133037.1 | hypothetical protein | - |
| C1I23_RS12310 () | 2281747..2282385 | - | 639 | WP_000394548.1 | hypothetical protein | - |
| C1I23_RS12315 () | 2282397..2282549 | - | 153 | WP_000379546.1 | DUF1391 family protein | - |
| C1I23_RS12320 () | 2282855..2283274 | - | 420 | WP_000410105.1 | helix-turn-helix domain-containing protein | - |
| C1I23_RS12325 () | 2283371..2283613 | + | 243 | WP_001033914.1 | helix-turn-helix domain-containing protein | - |
| C1I23_RS12330 () | 2283610..2284032 | + | 423 | WP_000702023.1 | hypothetical protein | - |
| C1I23_RS12335 () | 2284045..2284914 | + | 870 | WP_000899742.1 | DUF1376 domain-containing protein | - |
| C1I23_RS12340 () | 2284921..2285667 | + | 747 | WP_000788990.1 | ATP-binding protein | - |
| C1I23_RS12345 () | 2285689..2286459 | + | 771 | WP_032313847.1 | DUF1627 domain-containing protein | - |
| C1I23_RS12350 () | 2286475..2286867 | + | 393 | WP_001141093.1 | DUF977 family protein | - |
| C1I23_RS12355 () | 2286924..2287508 | + | 585 | WP_000206794.1 | DUF551 domain-containing protein | - |
| C1I23_RS12360 () | 2287624..2287728 | + | 105 | WP_001278450.1 | hypothetical protein | - |
| C1I23_RS12370 () | 2287974..2288129 | + | 156 | WP_000813258.1 | type I toxin-antitoxin system Hok family toxin | - |
| C1I23_RS12385 () | 2288689..2289288 | + | 600 | WP_000940348.1 | DUF1367 family protein | - |
| C1I23_RS12390 () | 2289288..2289578 | + | 291 | WP_000228019.1 | DUF1364 domain-containing protein | - |
| C1I23_RS12395 () | 2289575..2290129 | + | 555 | WP_000640148.1 | DUF1133 family protein | - |
| C1I23_RS12400 () | 2290403..2290984 | + | 582 | WP_000211416.1 | ORF6N domain-containing protein | - |
| C1I23_RS26055 () | 2291228..2291425 | + | 198 | WP_000917763.1 | hypothetical protein | - |
| C1I23_RS12410 () | 2291561..2292274 | + | 714 | WP_000301789.1 | helix-turn-helix domain-containing protein | - |
| C1I23_RS12430 () | 2292724..2293155 | + | 432 | WP_001427258.1 | tellurite resistance TerB family protein | - |
| C1I23_RS26060 () | 2293152..2293407 | + | 256 | Protein_2275 | DUF3927 family protein | - |
| C1I23_RS12440 () | 2293727..2295580 | + | 1854 | WP_032362312.1 | SASA family carbohydrate esterase | - |
| C1I23_RS12445 () | 2295730..2295945 | + | 216 | WP_000284518.1 | class II holin family protein | - |
| C1I23_RS12450 () | 2295950..2296294 | + | 345 | WP_102597164.1 | YdfR family protein | - |
| C1I23_RS12455 () | 2296345..2296878 | + | 534 | WP_000992128.1 | lysozyme | - |
| C1I23_RS26295 () | 2297038..2297175 | + | 138 | WP_000459347.1 | hypothetical protein | - |
| C1I23_RS12460 () | 2297177..2297644 | + | 468 | WP_001082545.1 | lysis protein | - |
| C1I23_RS12475 () | 2298086..2298631 | + | 546 | WP_000453587.1 | DNA-packaging protein | - |
| C1I23_RS12480 () | 2298606..2300531 | + | 1926 | WP_001027379.1 | phage terminase large subunit family protein | - |
| C1I23_RS12485 () | 2300528..2300734 | + | 207 | WP_000198153.1 | gpW family protein | - |
| C1I23_RS12490 () | 2300731..2301780 | + | 1050 | Protein_2285 | phage portal protein | - |
| C1I23_RS12495 () | 2301782..2302273 | + | 492 | Protein_2286 | phage tail protein | - |
| C1I23_RS12500 () | 2302270..2302665 | + | 396 | WP_000683137.1 | phage minor tail U family protein | - |
| C1I23_RS12505 () | 2302673..2303425 | + | 753 | WP_000235098.1 | Ig domain-containing protein | - |
| C1I23_RS12510 () | 2303439..2303861 | + | 423 | WP_000479045.1 | phage minor tail protein G | - |
| C1I23_RS12515 () | 2303888..2304301 | + | 414 | WP_000533440.1 | phage tail assembly protein T | - |
| C1I23_RS12520 () | 2304282..2306894 | + | 2613 | WP_102597166.1 | phage tail tape measure protein | - |
| C1I23_RS12525 () | 2306891..2307220 | + | 330 | WP_000847298.1 | phage tail protein | - |
| C1I23_RS12530 () | 2307220..2307918 | + | 699 | WP_044869462.1 | phage minor tail protein L | - |
| C1I23_RS12535 () | 2307924..2308667 | + | 744 | WP_102597167.1 | C40 family peptidase | - |
| C1I23_RS12540 () | 2308613..2309245 | + | 633 | WP_072065989.1 | tail assembly protein | - |
| C1I23_RS12545 () | 2309481..2312957 | + | 3477 | WP_102597168.1 | host specificity protein J | - |
| C1I23_RS12550 () | 2313026..2313649 | + | 624 | WP_001360257.1 | hypothetical protein | VF |
| C1I23_RS12555 () | 2313714..2315027 | + | 1314 | WP_000268905.1 | ISNCY family transposase KIS | Transposase |
| C1I23_RS12560 () | 2315029..2315298 | + | 270 | WP_102597169.1 | phage tail fiber C-terminal domain-containing protein | - |
| C1I23_RS12570 () | 2315701..2316719 | + | 1019 | Protein_2300 | M85 family metallopeptidase | - |
| C1I23_RS12575 () | 2317524..2317958 | - | 435 | WP_001300461.1 | universal stress protein UspF | - |
| C1I23_RS12580 () | 2318099..2319232 | - | 1134 | WP_000837921.1 | porin OmpN | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|