MGE detailed information
MGE type: IS/Tn MGE length: 2720 bp
Accession: NZ_CP025709 Location: 53287..56006 Organism: Escherichia coli strain YDC107 Replicon: plasmid pYDC107_85 map unlocalized
Accession: NZ_CP025709 Location: 53287..56006 Organism: Escherichia coli strain YDC107 Replicon: plasmid pYDC107_85 map unlocalized
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| YDC107_RS26985 (48764) | 48764..49834 | - | 1071 | WP_011264050.1 | IncI1-type conjugal transfer protein TrbB | - |
| YDC107_RS26990 (49853) | 49853..51061 | - | 1209 | WP_011264049.1 | IncI1-type conjugal transfer protein TrbA | - |
| - (51241) | 51241..51298 | - | 58 | NuclAT_1 | - | - |
| - (51241) | 51241..51298 | - | 58 | NuclAT_1 | - | - |
| - (51241) | 51241..51298 | - | 58 | NuclAT_1 | - | - |
| - (51241) | 51241..51298 | - | 58 | NuclAT_1 | - | - |
| YDC107_RS26995 (51368) | 51368..52150 | - | 783 | WP_023063753.1 | protein FinQ | - |
| YDC107_RS27000 (52346) | 52346..52663 | + | 318 | WP_000118520.1 | quaternary ammonium compound efflux SMR transporter SugE | - |
| YDC107_RS27005 (52660) | 52660..53193 | - | 534 | WP_001221666.1 | lipocalin family protein | - |
| YDC107_RS27010 (53287) | 53287..54420 | - | 1134 | WP_063859842.1 | Beta-lactamase | ARG |
| YDC107_RS27015 (54744) | 54744..56006 | - | 1263 | WP_000608644.1 | IS1380 family transposase ISEcp1 | Transposase |
| YDC107_RS27020 (56159) | 56159..56533 | - | 375 | WP_223349261.1 | hypothetical protein | - |
| - (56742) | 56742..56802 | - | 61 | NuclAT_0 | - | Antitoxin Detail |
| - (56742) | 56742..56802 | - | 61 | NuclAT_0 | - | Antitoxin Detail |
| - (56742) | 56742..56802 | - | 61 | NuclAT_0 | - | Antitoxin Detail |
| - (56742) | 56742..56802 | - | 61 | NuclAT_0 | - | Antitoxin Detail |
| YDC107_RS27025 (56854) | 56854..57006 | + | 153 | WP_001387489.1 | Hok/Gef family protein | Toxin Detail |
| YDC107_RS27030 (56996) | 56996..57208 | - | 213 | WP_050485428.1 | hypothetical protein | - |
| YDC107_RS28710 (57709) | 57709..57804 | + | 96 | WP_000609148.1 | DinQ-like type I toxin DqlB | - |
| YDC107_RS28260 (57869) | 57869..58045 | - | 177 | WP_001054897.1 | hypothetical protein | - |
| YDC107_RS27040 (58437) | 58437..58646 | + | 210 | WP_000062603.1 | HEAT repeat domain-containing protein | - |
| YDC107_RS27045 (58718) | 58718..59380 | - | 663 | WP_000644796.1 | plasmid IncI1-type surface exclusion protein ExcA | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|