MGE detailed information
MGE type: IS/Tn MGE length: 459 bp
Accession: NZ_CP025707 Location: 4764944..4765402 Organism: Escherichia coli strain YDC107 Replicon: chromosome
Accession: NZ_CP025707 Location: 4764944..4765402 Organism: Escherichia coli strain YDC107 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| YDC107_RS23205 () | 4760742..4761824 | + | 1083 | WP_000804726.1 | peptide chain release factor 1 | - |
| YDC107_RS23210 () | 4761824..4762657 | + | 834 | WP_000456570.1 | peptide chain release factor N(5)-glutamine methyltransferase | - |
| YDC107_RS23215 () | 4762654..4763046 | + | 393 | WP_105955864.1 | invasion regulator SirB2 | - |
| YDC107_RS23220 () | 4763050..4763859 | + | 810 | WP_001257044.1 | invasion regulator SirB1 | - |
| YDC107_RS23225 () | 4763895..4764749 | + | 855 | WP_000811065.1 | 3-deoxy-8-phosphooctulonate synthase | - |
| YDC107_RS23230 () | 4764944..4765402 | + | 459 | WP_000526135.1 | IS200/IS605 family transposase | - |
| YDC107_RS23235 () | 4765608..4765715 | - | 108 | WP_000176713.1 | type I toxin-antitoxin system toxin Ldr family protein | Toxin Detail |
| YDC107_RS23240 () | 4765723..4765941 | + | 219 | Protein_4528 | integrase | - |
| - () | 4765763..4765829 | + | 67 | NuclAT_21 | - | Antitoxin Detail |
| - () | 4765763..4765829 | + | 67 | NuclAT_21 | - | Antitoxin Detail |
| - () | 4765763..4765829 | + | 67 | NuclAT_21 | - | Antitoxin Detail |
| - () | 4765763..4765829 | + | 67 | NuclAT_21 | - | Antitoxin Detail |
| - () | 4765763..4765829 | + | 67 | NuclAT_26 | - | Antitoxin Detail |
| - () | 4765763..4765829 | + | 67 | NuclAT_26 | - | Antitoxin Detail |
| - () | 4765763..4765829 | + | 67 | NuclAT_26 | - | Antitoxin Detail |
| - () | 4765763..4765829 | + | 67 | NuclAT_26 | - | Antitoxin Detail |
| - () | 4765763..4765829 | + | 67 | NuclAT_31 | - | Antitoxin Detail |
| - () | 4765763..4765829 | + | 67 | NuclAT_31 | - | Antitoxin Detail |
| - () | 4765763..4765829 | + | 67 | NuclAT_31 | - | Antitoxin Detail |
| - () | 4765763..4765829 | + | 67 | NuclAT_31 | - | Antitoxin Detail |
| - () | 4765763..4765829 | + | 67 | NuclAT_36 | - | Antitoxin Detail |
| - () | 4765763..4765829 | + | 67 | NuclAT_36 | - | Antitoxin Detail |
| - () | 4765763..4765829 | + | 67 | NuclAT_36 | - | Antitoxin Detail |
| - () | 4765763..4765829 | + | 67 | NuclAT_36 | - | Antitoxin Detail |
| - () | 4765763..4765829 | + | 67 | NuclAT_38 | - | Antitoxin Detail |
| - () | 4765763..4765829 | + | 67 | NuclAT_38 | - | Antitoxin Detail |
| - () | 4765763..4765829 | + | 67 | NuclAT_38 | - | Antitoxin Detail |
| - () | 4765763..4765829 | + | 67 | NuclAT_38 | - | Antitoxin Detail |
| - () | 4765763..4765829 | + | 67 | NuclAT_43 | - | Antitoxin Detail |
| - () | 4765763..4765829 | + | 67 | NuclAT_43 | - | Antitoxin Detail |
| - () | 4765763..4765829 | + | 67 | NuclAT_43 | - | Antitoxin Detail |
| - () | 4765763..4765829 | + | 67 | NuclAT_43 | - | Antitoxin Detail |
| - () | 4765765..4765828 | + | 64 | NuclAT_46 | - | - |
| - () | 4765765..4765828 | + | 64 | NuclAT_46 | - | - |
| - () | 4765765..4765828 | + | 64 | NuclAT_46 | - | - |
| - () | 4765765..4765828 | + | 64 | NuclAT_46 | - | - |
| - () | 4765765..4765828 | + | 64 | NuclAT_48 | - | - |
| - () | 4765765..4765828 | + | 64 | NuclAT_48 | - | - |
| - () | 4765765..4765828 | + | 64 | NuclAT_48 | - | - |
| - () | 4765765..4765828 | + | 64 | NuclAT_48 | - | - |
| YDC107_RS23245 () | 4766143..4766250 | - | 108 | WP_000170955.1 | small toxic polypeptide LdrA/LdrC | - |
| YDC107_RS23250 () | 4766258..4766477 | + | 220 | Protein_4530 | integrase | - |
| - () | 4766303..4766364 | + | 62 | NuclAT_45 | - | - |
| - () | 4766303..4766364 | + | 62 | NuclAT_45 | - | - |
| - () | 4766303..4766364 | + | 62 | NuclAT_45 | - | - |
| - () | 4766303..4766364 | + | 62 | NuclAT_45 | - | - |
| - () | 4766303..4766364 | + | 62 | NuclAT_47 | - | - |
| - () | 4766303..4766364 | + | 62 | NuclAT_47 | - | - |
| - () | 4766303..4766364 | + | 62 | NuclAT_47 | - | - |
| - () | 4766303..4766364 | + | 62 | NuclAT_47 | - | - |
| - () | 4766303..4766365 | + | 63 | NuclAT_22 | - | - |
| - () | 4766303..4766365 | + | 63 | NuclAT_22 | - | - |
| - () | 4766303..4766365 | + | 63 | NuclAT_22 | - | - |
| - () | 4766303..4766365 | + | 63 | NuclAT_22 | - | - |
| - () | 4766303..4766365 | + | 63 | NuclAT_27 | - | - |
| - () | 4766303..4766365 | + | 63 | NuclAT_27 | - | - |
| - () | 4766303..4766365 | + | 63 | NuclAT_27 | - | - |
| - () | 4766303..4766365 | + | 63 | NuclAT_27 | - | - |
| - () | 4766303..4766365 | + | 63 | NuclAT_32 | - | - |
| - () | 4766303..4766365 | + | 63 | NuclAT_32 | - | - |
| - () | 4766303..4766365 | + | 63 | NuclAT_32 | - | - |
| - () | 4766303..4766365 | + | 63 | NuclAT_32 | - | - |
| - () | 4766303..4766365 | + | 63 | NuclAT_37 | - | - |
| - () | 4766303..4766365 | + | 63 | NuclAT_37 | - | - |
| - () | 4766303..4766365 | + | 63 | NuclAT_37 | - | - |
| - () | 4766303..4766365 | + | 63 | NuclAT_37 | - | - |
| - () | 4766303..4766365 | + | 63 | NuclAT_39 | - | - |
| - () | 4766303..4766365 | + | 63 | NuclAT_39 | - | - |
| - () | 4766303..4766365 | + | 63 | NuclAT_39 | - | - |
| - () | 4766303..4766365 | + | 63 | NuclAT_39 | - | - |
| - () | 4766303..4766365 | + | 63 | NuclAT_44 | - | - |
| - () | 4766303..4766365 | + | 63 | NuclAT_44 | - | - |
| - () | 4766303..4766365 | + | 63 | NuclAT_44 | - | - |
| - () | 4766303..4766365 | + | 63 | NuclAT_44 | - | - |
| YDC107_RS23255 () | 4766656..4767756 | - | 1101 | WP_001309461.1 | sodium-potassium/proton antiporter ChaA | - |
| YDC107_RS23260 () | 4768026..4768256 | + | 231 | WP_001146444.1 | putative cation transport regulator ChaB | - |
| YDC107_RS23265 () | 4768414..4769109 | + | 696 | WP_001295621.1 | glutathione-specific gamma-glutamylcyclotransferase | - |
| YDC107_RS23270 () | 4769153..4769506 | - | 354 | WP_001169659.1 | DsrE/F sulfur relay family protein YchN | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|