MGE detailed information
MGE type: Genomic_island MGE length: 10312 bp
Accession: NZ_CP025624 Location: 5264485..5274796 Organism: Pseudomonas sp. NC02 Replicon: chromosome
Accession: NZ_CP025624 Location: 5264485..5274796 Organism: Pseudomonas sp. NC02 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| C0058_RS24610 () | 5260550..5261833 | + | 1284 | WP_102369725.1 | ABC transporter substrate-binding protein | - |
| C0058_RS24615 () | 5262304..5263554 | + | 1251 | WP_023659243.1 | ribonucleotide-diphosphate reductase subunit beta | - |
| C0058_RS24620 () | 5263700..5264413 | + | 714 | WP_003211515.1 | HNH endonuclease | - |
| C0058_RS24625 () | 5264485..5265126 | + | 642 | WP_102369726.1 | HAD-IB family hydrolase | - |
| C0058_RS24630 () | 5265168..5265572 | - | 405 | WP_026077784.1 | type II toxin-antitoxin system VapC family toxin | Toxin Detail |
| C0058_RS24635 () | 5265565..5265804 | - | 240 | WP_008432930.1 | AbrB/MazE/SpoVT family DNA-binding domain-containing protein | Antitoxin Detail |
| C0058_RS24640 () | 5266088..5267047 | - | 960 | WP_102369727.1 | LysR family transcriptional regulator | - |
| C0058_RS24645 () | 5267310..5268737 | + | 1428 | WP_102369728.1 | argininosuccinate lyase | - |
| C0058_RS24650 () | 5268876..5269754 | + | 879 | WP_003211504.1 | amino acid ABC transporter permease | - |
| C0058_RS24655 () | 5269778..5270542 | + | 765 | WP_003211502.1 | Vitamin B12 import ATP-binding protein BtuD | VF |
| C0058_RS24660 () | 5270568..5271389 | + | 822 | WP_087693114.1 | ABC transporter substrate-binding protein | - |
| C0058_RS24665 () | 5271537..5272706 | + | 1170 | WP_003211499.1 | MFS transporter | - |
| C0058_RS24670 () | 5272771..5273721 | + | 951 | WP_102369729.1 | hypothetical protein | - |
| C0058_RS24675 () | 5273734..5274390 | - | 657 | WP_102369730.1 | hypothetical protein | - |
| C0058_RS24680 () | 5274434..5274796 | - | 363 | WP_003211495.1 | hypothetical protein | - |
| C0058_RS24685 () | 5274875..5275681 | - | 807 | WP_102369731.1 | sulfite exporter TauE/SafE family protein | - |
| C0058_RS24690 () | 5275797..5276567 | + | 771 | WP_102370296.1 | helix-turn-helix transcriptional regulator | - |
| C0058_RS24695 () | 5276671..5276991 | + | 321 | WP_023659239.1 | helix-turn-helix transcriptional regulator | - |
| C0058_RS24700 () | 5277039..5277401 | + | 363 | WP_003211487.1 | type II toxin-antitoxin system RelE/ParE family toxin | - |
| C0058_RS24705 () | 5277376..5277714 | + | 339 | WP_003211485.1 | helix-turn-helix domain-containing protein | - |
| C0058_RS24710 () | 5277743..5278681 | - | 939 | WP_102369732.1 | GlxA family transcriptional regulator | - |
| C0058_RS24715 () | 5278798..5279592 | + | 795 | WP_008432939.1 | SDR family oxidoreductase | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|