MGE detailed information
MGE type: IScluster/Tn MGE length: 6361 bp
Accession: NZ_CP025608 Location: 3795110..3801470 Organism: Mycobacterium tuberculosis strain GG-229-10 Replicon: chromosome
Accession: NZ_CP025608 Location: 3795110..3801470 Organism: Mycobacterium tuberculosis strain GG-229-10 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| C0089_RS18505 () | 3790166..3790819 | + | 654 | WP_003417903.1 | HAD family phosphatase | - |
| C0089_RS18510 () | 3790858..3792363 | - | 1506 | WP_003417905.1 | type B diterpene cyclase | - |
| C0089_RS18515 () | 3792368..3793258 | - | 891 | WP_003417908.1 | diterpene synthase | - |
| C0089_RS18520 () | 3793267..3795067 | - | 1801 | Protein_3496 | 1-deoxy-D-xylulose-5-phosphate synthase | - |
| C0089_RS18535 () | 3796455..3797444 | - | 990 | WP_003417912.1 | 4-hydroxy-3-methylbut-2-enyl diphosphate reductase | - |
| C0089_RS18540 () | 3797444..3798496 | - | 1053 | WP_003900678.1 | polyprenyl synthetase family protein | - |
| C0089_RS18545 () | 3799250..3799642 | - | 393 | WP_003417916.1 | type II toxin-antitoxin system VapC family toxin | Toxin Detail |
| C0089_RS18550 () | 3799642..3799917 | - | 276 | WP_003912214.1 | type II toxin-antitoxin system Phd/YefM family antitoxin | Antitoxin Detail |
| C0089_RS18555 () | 3800129..3801470 | + | 1342 | Protein_3502 | ISNCY family transposase ISRjo3 | Transposase |
| C0089_RS18560 () | 3801660..3803855 | + | 2196 | WP_010886168.1 | PE family protein | - |
| C0089_RS18565 () | 3803926..3804798 | - | 873 | WP_003417929.1 | 3-hydroxyacyl-thioester dehydratase HtdY | - |
| C0089_RS18570 () | 3804872..3805582 | + | 711 | WP_003417932.1 | phosphoglycerate mutase family protein | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|---|---|---|---|---|---|
| Mycobacterium tuberculosis H37Rv | IScluster/Tn | TA131 | NC_000962 | 3795100..3801463 | 0.001 |