MGE detailed information
MGE type: Prophage MGE length: 32878 bp
Accession: NZ_CP025608 Location: 3547606..3580483 Organism: Mycobacterium tuberculosis strain GG-229-10 Replicon: chromosome
Accession: NZ_CP025608 Location: 3547606..3580483 Organism: Mycobacterium tuberculosis strain GG-229-10 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| C0089_RS17395 () | 3542848..3544335 | + | 1488 | WP_003416624.1 | amidase | - |
| C0089_RS17400 () | 3544332..3545288 | - | 957 | WP_003416627.1 | epoxide hydrolase MesT | - |
| C0089_RS17405 () | 3545435..3546295 | + | 861 | WP_003416628.1 | alpha/beta hydrolase | - |
| C0089_RS17410 () | 3546270..3546785 | + | 516 | WP_003899950.1 | nitroreductase family deazaflavin-dependent oxidoreductase | - |
| C0089_RS17420 () | 3547025..3547318 | + | 294 | WP_003416635.1 | hypothetical protein | - |
| C0089_RS17425 () | 3547606..3548895 | + | 1290 | WP_003906996.1 | ATP-binding protein | - |
| C0089_RS17430 () | 3549242..3549676 | - | 435 | WP_003899952.1 | type II toxin-antitoxin system VapC family toxin | - |
| C0089_RS17435 () | 3549679..3550131 | - | 453 | WP_003899953.1 | type II toxin-antitoxin system Phd/YefM family antitoxin | - |
| C0089_RS17440 () | 3550362..3550706 | + | 345 | WP_003899954.1 | type II toxin-antitoxin system RelE/ParE family toxin | Toxin Detail |
| C0089_RS17445 () | 3550703..3551032 | + | 330 | WP_003899955.1 | XRE family transcriptional regulator | Antitoxin Detail |
| C0089_RS17450 () | 3551269..3552530 | + | 1262 | WP_087902221.1 | IS3 family transposase IS987 | Transposase |
| C0089_RS17455 () | 3552752..3554013 | + | 1262 | WP_087902221.1 | IS3 family transposase IS987 | Transposase |
| C0089_RS17460 () | 3554286..3554633 | + | 348 | WP_003899956.1 | DUF2384 domain-containing protein | - |
| C0089_RS17465 () | 3554630..3555250 | + | 621 | WP_003899957.1 | RES family NAD+ phosphorylase | - |
| C0089_RS17470 () | 3555410..3556675 | - | 1266 | WP_003902423.1 | hypothetical protein | - |
| C0089_RS17475 () | 3556843..3557052 | + | 210 | WP_003416778.1 | hypothetical protein | - |
| C0089_RS17485 () | 3557299..3558333 | - | 1035 | WP_003416786.1 | IS30 family transposase ISLxc3 | Transposase |
| C0089_RS17490 () | 3558617..3558841 | - | 225 | WP_003416790.1 | hypothetical protein | - |
| C0089_RS17505 () | 3559548..3560012 | + | 465 | WP_003913440.1 | LLM class flavin-dependent oxidoreductase | - |
| C0089_RS17510 () | 3560182..3563160 | - | 2979 | WP_003899961.1 | UPF0182 family protein | - |
| C0089_RS17515 () | 3563252..3564274 | - | 1023 | WP_003416799.1 | PDZ domain-containing protein | - |
| C0089_RS17520 () | 3564352..3565770 | + | 1419 | WP_012054345.1 | zinc-dependent metalloprotease | - |
| C0089_RS17525 () | 3565809..3566675 | + | 867 | WP_021082912.1 | hypothetical protein | - |
| C0089_RS17530 () | 3566684..3566857 | - | 174 | WP_015456486.1 | hypothetical protein | - |
| C0089_RS17535 () | 3567012..3568355 | + | 1344 | WP_003416815.1 | AarF/ABC1/UbiB kinase family protein | - |
| C0089_RS17540 () | 3568389..3568667 | - | 279 | WP_003899963.1 | transcriptional regulator WhiB7 | - |
| C0089_RS17545 () | 3569097..3571199 | - | 2103 | WP_003416822.1 | ATP-dependent DNA helicase UvrD2 | - |
| C0089_RS17550 () | 3571323..3571577 | + | 255 | WP_003416827.1 | mycoredoxin Mrx1 | - |
| C0089_RS17555 () | 3571590..3572531 | - | 942 | WP_003899965.1 | NAD(+) diphosphatase | - |
| C0089_RS17560 () | 3572590..3573657 | - | 1068 | WP_003899966.1 | potassium channel family protein | - |
| C0089_RS17565 () | 3573719..3577024 | - | 3306 | WP_003416833.1 | ATP-dependent DNA helicase AdnB | - |
| C0089_RS17570 () | 3577021..3580188 | - | 3168 | WP_003899967.1 | ATP-dependent DNA helicase AdnA | - |
| C0089_RS17575 () | 3580274..3580483 | + | 210 | WP_003907005.1 | hypothetical protein | - |
| C0089_RS17580 () | 3580514..3581299 | + | 786 | WP_012054346.1 | lipase LipV | - |
| C0089_RS17585 () | 3581302..3581607 | + | 306 | WP_003416847.1 | MGMT family protein | - |
| C0089_RS17590 () | 3581614..3582468 | - | 855 | WP_003416850.1 | TIGR02569 family protein | - |
| C0089_RS17595 () | 3582519..3583697 | - | 1179 | WP_003416855.1 | adenylyltransferase/sulfurtransferase MoeZ | - |
| C0089_RS17600 () | 3583788..3584816 | - | 1029 | WP_003899970.1 | DUF3152 domain-containing protein | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|---|---|---|---|---|---|
| Mycobacterium tuberculosis H37Rv | Prophage | TA127 | NC_000962 | 3547618..3580495 | 0 |